RNA–Protein interactions for RNA: ENST00000482000.1

PRKCB-206, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-206ENST00000482000 AEBP2Q6ZN18 517 aaPredicted RBP21.23■□□□□ 0.99
PRKCB-206ENST00000482000 CHIC1Q5VXU3 224 aa20.91■□□□□ 0.94
PRKCB-206ENST00000482000 PHF23Q9BUL5 403 aaPredicted RBP18.44■□□□□ 0.54
PRKCB-206ENST00000482000 SENP3Q9H4L4 574 aaPredicted RBP17.95■□□□□ 0.46
PRKCB-206ENST00000482000 PLPPR3Q6T4P5 718 aa17.05■□□□□ 0.32
PRKCB-206ENST00000482000 FOXD1Q16676 465 aa16.67■□□□□ 0.26
PRKCB-206ENST00000482000 PPP6R1Q9UPN7 881 aa16.21■□□□□ 0.19
PRKCB-206ENST00000482000 ADRA2BP18089 450 aa16.18■□□□□ 0.18
PRKCB-206ENST00000482000 PIAS4Q8N2W9 510 aaPredicted RBP15.72■□□□□ 0.11
PRKCB-206ENST00000482000 MSH5O43196 834 aa15.26■□□□□ 0.03
PRKCB-206ENST00000482000 PPP4R3CPQ6ZMV5 832 aa15.06■□□□□ 0
PRKCB-206ENST00000482000 KCNA4P22459 653 aa14.92□□□□□ -0.02
PRKCB-206ENST00000482000 SCAF1Q9H7N4 1312 aaKnown RBP14.78□□□□□ -0.04
PRKCB-206ENST00000482000 NCBP3Q53F19 620 aaKnown RBP14.69□□□□□ -0.06
PRKCB-206ENST00000482000 MAPK8IP2Q13387 824 aaPredicted RBP14.63□□□□□ -0.07
PRKCB-206ENST00000482000 CNKSR2Q8WXI2 1034 aa14.59□□□□□ -0.07
PRKCB-206ENST00000482000 NPM3O75607 178 aaKnown RBP14.5□□□□□ -0.09
PRKCB-206ENST00000482000 DMRT2Q9Y5R5 561 aa14.38□□□□□ -0.11
PRKCB-206ENST00000482000 RNF216Q9NWF9 866 aaPredicted RBP14.27□□□□□ -0.13
PRKCB-206ENST00000482000 SLC4A1APQ9BWU0 796 aaKnown RBP14.22□□□□□ -0.13
PRKCB-206ENST00000482000 HOXD11P31277 338 aaPredicted RBP14.17□□□□□ -0.14
PRKCB-206ENST00000482000 DNAJC5BQ9UF47 199 aa14.11□□□□□ -0.15
PRKCB-206ENST00000482000 EHMT2Q96KQ7 1210 aa14□□□□□ -0.17
PRKCB-206ENST00000482000 CSRNP3Q8WYN3 585 aa13.83□□□□□ -0.2
PRKCB-206ENST00000482000 ZBTB22O15209 634 aa13.75□□□□□ -0.21
PRKCB-206ENST00000482000 DCAF8L1A6NGE4 600 aa13.68□□□□□ -0.22
PRKCB-206ENST00000482000 SLC4A2P04920 1241 aa13.67□□□□□ -0.22
PRKCB-206ENST00000482000 FOXD4L1Q9NU39 408 aa13.66□□□□□ -0.22
PRKCB-206ENST00000482000 POTEDQ86YR6 584 aa13.58□□□□□ -0.24
PRKCB-206ENST00000482000 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.45□□□□□ -0.26
PRKCB-206ENST00000482000 MYCNP04198 464 aaPredicted RBP13.38□□□□□ -0.27
PRKCB-206ENST00000482000 U3KPZ7 1027 aaPredicted RBP13.28□□□□□ -0.28
PRKCB-206ENST00000482000 ATXN8OSP0DMR3 200 aa13.2□□□□□ -0.3
PRKCB-206ENST00000482000 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.16□□□□□ -0.3
PRKCB-206ENST00000482000 HNRNPUL2Q1KMD3 747 aaKnown RBP13.16□□□□□ -0.3
PRKCB-206ENST00000482000 SAMD1Q6SPF0 538 aaPredicted RBP13.12□□□□□ -0.31
PRKCB-206ENST00000482000 RNF39Q9H2S5 420 aa13.12□□□□□ -0.31
PRKCB-206ENST00000482000 ATF5Q9Y2D1 282 aaPredicted RBP13.04□□□□□ -0.32
PRKCB-206ENST00000482000 C1QBPQ07021 282 aaKnown RBP12.97□□□□□ -0.33
PRKCB-206ENST00000482000 APLP2Q06481 763 aa12.96□□□□□ -0.33
PRKCB-206ENST00000482000 SPINK5Q9NQ38 1064 aaPredicted RBP12.85□□□□□ -0.35
PRKCB-206ENST00000482000 ZNF219Q9P2Y4 722 aaPredicted RBP12.8□□□□□ -0.36
PRKCB-206ENST00000482000 CAPN15O75808 1086 aa12.76□□□□□ -0.37
PRKCB-206ENST00000482000 TRHP20396 242 aaPredicted RBP12.75□□□□□ -0.37
PRKCB-206ENST00000482000 POLA2Q14181 598 aa12.62□□□□□ -0.39
PRKCB-206ENST00000482000 CACNB1Q02641 598 aaPredicted RBP12.6□□□□□ -0.39
PRKCB-206ENST00000482000 DSG3P32926 999 aa12.55□□□□□ -0.4
PRKCB-206ENST00000482000 ABCB7O75027 752 aa12.54□□□□□ -0.4
PRKCB-206ENST00000482000 MKRN4PQ13434 485 aaPredicted RBP12.48□□□□□ -0.41
PRKCB-206ENST00000482000 FKBP8Q14318 412 aa12.44□□□□□ -0.42
PRKCB-206ENST00000482000 FBLN2P98095 1184 aa12.43□□□□□ -0.42
PRKCB-206ENST00000482000 ZBTB12Q9Y330 459 aaPredicted RBP12.4□□□□□ -0.42
PRKCB-206ENST00000482000 NISCHQ9Y2I1 1504 aa12.34□□□□□ -0.43
PRKCB-206ENST00000482000 SPDYE4A6NLX3 237 aa12.26□□□□□ -0.45
PRKCB-206ENST00000482000 OSCARQ8IYS5 282 aa12.15□□□□□ -0.46
PRKCB-206ENST00000482000 PROM2Q8N271 834 aa12.14□□□□□ -0.47
PRKCB-206ENST00000482000 SPDYE2BA6NHP3 402 aa12.1□□□□□ -0.47
PRKCB-206ENST00000482000 SPDYE6P0CI01 402 aa12.1□□□□□ -0.47
PRKCB-206ENST00000482000 SPDYE2Q495Y8 402 aa12.1□□□□□ -0.47
PRKCB-206ENST00000482000 ZNF692Q9BU19 519 aaPredicted RBP12.07□□□□□ -0.48
PRKCB-206ENST00000482000 SSUH2Q9Y2M2 353 aa12.04□□□□□ -0.48
PRKCB-206ENST00000482000 FBXO3Q9UK99 471 aa11.96□□□□□ -0.49
PRKCB-206ENST00000482000 PABPN1Q86U42 306 aaKnown RBP eCLIP11.92□□□□□ -0.5
PRKCB-206ENST00000482000 RBM42Q9BTD8 480 aaKnown RBP11.91□□□□□ -0.5
PRKCB-206ENST00000482000 AKT1S1Q96B36 256 aa11.84□□□□□ -0.51
PRKCB-206ENST00000482000 VASPP50552 380 aaPredicted RBP11.79□□□□□ -0.52
PRKCB-206ENST00000482000 STAG3Q9UJ98 1225 aa11.77□□□□□ -0.53
PRKCB-206ENST00000482000 REM2Q8IYK8 340 aaPredicted RBP11.73□□□□□ -0.53
PRKCB-206ENST00000482000 SPDYE1Q8NFV5 336 aaPredicted RBP11.69□□□□□ -0.54
PRKCB-206ENST00000482000 AMER1Q5JTC6 1135 aaPredicted RBP11.67□□□□□ -0.54
PRKCB-206ENST00000482000 IFNLR1Q8IU57 520 aaPredicted RBP11.67□□□□□ -0.54
PRKCB-206ENST00000482000 RTN4Q9NQC3 1192 aaKnown RBP11.65□□□□□ -0.54
PRKCB-206ENST00000482000 CLEC11AQ9Y240 323 aa11.61□□□□□ -0.55
PRKCB-206ENST00000482000 MIER1Q8N108 512 aa11.6□□□□□ -0.55
PRKCB-206ENST00000482000 PLCD3Q8N3E9 789 aa11.59□□□□□ -0.55
PRKCB-206ENST00000482000 PITPNM1O00562 1244 aa11.58□□□□□ -0.56
PRKCB-206ENST00000482000 PRR29P0C7W0 189 aa11.55□□□□□ -0.56
PRKCB-206ENST00000482000 KLHL34Q8N239 644 aa11.51□□□□□ -0.57
PRKCB-206ENST00000482000 PLEKHG5O94827 1062 aa11.5□□□□□ -0.57
PRKCB-206ENST00000482000 CREBZFQ9NS37 354 aa11.48□□□□□ -0.57
PRKCB-206ENST00000482000 SPOCK2Q92563 424 aa11.47□□□□□ -0.57
PRKCB-206ENST00000482000 ZBTB47Q9UFB7 747 aaPredicted RBP11.45□□□□□ -0.58
PRKCB-206ENST00000482000 MNX1P50219 401 aaPredicted RBP11.4□□□□□ -0.58
PRKCB-206ENST00000482000 CHRDL2Q6WN34 429 aa11.36□□□□□ -0.59
PRKCB-206ENST00000482000 FXR2P51116 673 aaKnown RBP eCLIP11.35□□□□□ -0.593e-6■■■■□ 23.1
PRKCB-206ENST00000482000 PKD2Q13563 968 aa11.35□□□□□ -0.59
PRKCB-206ENST00000482000 NUBP1P53384 320 aa11.32□□□□□ -0.6
PRKCB-206ENST00000482000 CHADLQ6NUI6 762 aa11.32□□□□□ -0.6
PRKCB-206ENST00000482000 PRKAR2AP13861 404 aaKnown RBP11.28□□□□□ -0.6
PRKCB-206ENST00000482000 PIP4P2Q8N4L2 257 aa11.27□□□□□ -0.61
PRKCB-206ENST00000482000 NPM1P06748 294 aaKnown RBP eCLIP11.26□□□□□ -0.61
PRKCB-206ENST00000482000 FARP1Q9Y4F1 1045 aaPredicted RBP11.25□□□□□ -0.61
PRKCB-206ENST00000482000 CIZ1Q9ULV3 898 aaPredicted RBP11.24□□□□□ -0.61
PRKCB-206ENST00000482000 GSE1Q14687 1217 aa11.22□□□□□ -0.61
PRKCB-206ENST00000482000 ECM2O94769 699 aaPredicted RBP11.21□□□□□ -0.61
PRKCB-206ENST00000482000 RASEFQ8IZ41 740 aa11.2□□□□□ -0.62
PRKCB-206ENST00000482000 DCAF8Q5TAQ9 597 aa11.19□□□□□ -0.62
PRKCB-206ENST00000482000 FAM212AQ96EL1 285 aa11.17□□□□□ -0.62
PRKCB-206ENST00000482000 TRIM41Q8WV44 630 aa11.16□□□□□ -0.62
PRKCB-206ENST00000482000 RGL2O15211 777 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 322.6 ms