RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 KIAA0825Q8IV33 1275 aa13.35□□□□□ -0.27
PDE6C-201ENST00000371447 GJA10Q969M2 543 aa13.35□□□□□ -0.27
PDE6C-201ENST00000371447 COA7Q96BR5 231 aa13.35□□□□□ -0.27
PDE6C-201ENST00000371447 VPS16Q9H269 839 aa13.35□□□□□ -0.27
PDE6C-201ENST00000371447 USP17L5A8MUK1 530 aa13.34□□□□□ -0.27
PDE6C-201ENST00000371447 GSTO1P78417 241 aa13.34□□□□□ -0.27
PDE6C-201ENST00000371447 PPP4R3BQ5MIZ7 849 aa13.34□□□□□ -0.27
PDE6C-201ENST00000371447 MED15Q96RN5 788 aa13.34□□□□□ -0.27
PDE6C-201ENST00000371447 PIGSQ96S52 555 aa13.34□□□□□ -0.27
PDE6C-201ENST00000371447 GDAQ9Y2T3 454 aa13.34□□□□□ -0.27
PDE6C-201ENST00000371447 DDX60Q8IY21 1712 aaKnown RBP13.34□□□□□ -0.27
PDE6C-201ENST00000371447 DPP8Q6V1X1 898 aaPredicted RBP13.34□□□□□ -0.27
PDE6C-201ENST00000371447 RTFDC1Q9BY42 306 aaPredicted RBP13.34□□□□□ -0.27
PDE6C-201ENST00000371447 TMEM260Q9NX78 707 aa13.34□□□□□ -0.27
PDE6C-201ENST00000371447 TRPC5Q9UL62 973 aaPredicted RBP13.34□□□□□ -0.27
PDE6C-201ENST00000371447 CCNT1O60563 726 aaKnown RBP13.34□□□□□ -0.27
PDE6C-201ENST00000371447 STAT6P42226 847 aa13.34□□□□□ -0.27
PDE6C-201ENST00000371447 SHROOM1Q2M3G4 852 aaPredicted RBP13.34□□□□□ -0.27
PDE6C-201ENST00000371447 INTS13Q9NVM9 706 aa13.34□□□□□ -0.27
PDE6C-201ENST00000371447 ZNF215Q9UL58 517 aaPredicted RBP13.34□□□□□ -0.27
PDE6C-201ENST00000371447 UBA7P41226 1012 aa13.33□□□□□ -0.28
PDE6C-201ENST00000371447 TXNRD1Q16881 649 aa13.33□□□□□ -0.28
PDE6C-201ENST00000371447 KRT27Q7Z3Y8 459 aa13.33□□□□□ -0.28
PDE6C-201ENST00000371447 CCDC34Q96HJ3 373 aa13.33□□□□□ -0.28
PDE6C-201ENST00000371447 PDCL3Q9H2J4 239 aa13.33□□□□□ -0.28
PDE6C-201ENST00000371447 MAD2L2Q9UI95 211 aa13.33□□□□□ -0.28
PDE6C-201ENST00000371447 APBA3O96018 575 aa13.33□□□□□ -0.28
PDE6C-201ENST00000371447 SLFN14P0C7P3 912 aa13.33□□□□□ -0.28
PDE6C-201ENST00000371447 MTF1Q14872 753 aa13.33□□□□□ -0.28
PDE6C-201ENST00000371447 FLT1P17948 1338 aa13.33□□□□□ -0.28
PDE6C-201ENST00000371447 LTBP4Q8N2S1 1624 aa13.33□□□□□ -0.28
PDE6C-201ENST00000371447 IKBKBO14920 756 aa13.33□□□□□ -0.28
PDE6C-201ENST00000371447 PARP1P09874 1014 aaKnown RBP13.33□□□□□ -0.28
PDE6C-201ENST00000371447 SNAP25P60880 206 aa13.33□□□□□ -0.28
PDE6C-201ENST00000371447 CCDC96Q2M329 555 aa13.33□□□□□ -0.28
PDE6C-201ENST00000371447 PPP1R13BQ96KQ4 1090 aa13.33□□□□□ -0.28
PDE6C-201ENST00000371447 USP40Q9NVE5 1235 aa13.33□□□□□ -0.28
PDE6C-201ENST00000371447 SMCO2A6NFE2 343 aa13.32□□□□□ -0.28
PDE6C-201ENST00000371447 PPEF1O14829 653 aaPredicted RBP13.32□□□□□ -0.28
PDE6C-201ENST00000371447 CBFA2T2O43439 604 aa13.32□□□□□ -0.28
PDE6C-201ENST00000371447 IGSF3O75054 1194 aa13.32□□□□□ -0.28
PDE6C-201ENST00000371447 DPYDQ12882 1025 aa13.32□□□□□ -0.28
PDE6C-201ENST00000371447 SOGA3Q5TF21 947 aa13.32□□□□□ -0.28
PDE6C-201ENST00000371447 PDCL2Q8N4E4 241 aa13.32□□□□□ -0.28
PDE6C-201ENST00000371447 IQUBQ8NA54 791 aa13.32□□□□□ -0.28
PDE6C-201ENST00000371447 HPS3Q969F9 1004 aa13.32□□□□□ -0.28
PDE6C-201ENST00000371447 ZSWIM4Q9H7M6 989 aa13.32□□□□□ -0.28
PDE6C-201ENST00000371447 SEC63Q9UGP8 760 aaKnown RBP13.32□□□□□ -0.28
PDE6C-201ENST00000371447 TRIM49BA6NDI0 452 aa13.32□□□□□ -0.28
PDE6C-201ENST00000371447 MMP10P09238 476 aa13.32□□□□□ -0.28
PDE6C-201ENST00000371447 ATP2B4P23634 1241 aa13.32□□□□□ -0.28
PDE6C-201ENST00000371447 TECP42680 631 aa13.32□□□□□ -0.28
PDE6C-201ENST00000371447 TXKP42681 527 aa13.32□□□□□ -0.28
PDE6C-201ENST00000371447 TERF1P54274 439 aa13.32□□□□□ -0.28
PDE6C-201ENST00000371447 MORC3Q14149 939 aa13.32□□□□□ -0.28
PDE6C-201ENST00000371447 PPP2R5BQ15173 497 aa13.32□□□□□ -0.28
PDE6C-201ENST00000371447 DTHD1Q6ZMT9 781 aa13.32□□□□□ -0.28
PDE6C-201ENST00000371447 PLCD3Q8N3E9 789 aa13.32□□□□□ -0.28
PDE6C-201ENST00000371447 MLKLQ8NB16 471 aa13.32□□□□□ -0.28
PDE6C-201ENST00000371447 KIF18AQ8NI77 898 aa13.32□□□□□ -0.28
PDE6C-201ENST00000371447 TAB2Q9NYJ8 693 aa13.32□□□□□ -0.28
PDE6C-201ENST00000371447 MARCH6O60337 910 aa13.31□□□□□ -0.28
PDE6C-201ENST00000371447 NEMFO60524 1076 aa13.31□□□□□ -0.28
PDE6C-201ENST00000371447 URI1O94763 535 aaPredicted RBP13.31□□□□□ -0.28
PDE6C-201ENST00000371447 SBK1Q52WX2 424 aa13.31□□□□□ -0.28
PDE6C-201ENST00000371447 CCDC150Q8NCX0 1101 aa13.31□□□□□ -0.28
PDE6C-201ENST00000371447 LRRN4CLQ8ND94 238 aa13.31□□□□□ -0.28
PDE6C-201ENST00000371447 TMX4Q9H1E5 349 aaPredicted RBP13.31□□□□□ -0.28
PDE6C-201ENST00000371447 LZTFL1Q9NQ48 299 aa13.31□□□□□ -0.28
PDE6C-201ENST00000371447 DAGLAQ9Y4D2 1042 aa13.31□□□□□ -0.28
PDE6C-201ENST00000371447 SYNRGQ9UMZ2 1314 aa13.31□□□□□ -0.28
PDE6C-201ENST00000371447 AKR1B1P15121 316 aa13.31□□□□□ -0.28
PDE6C-201ENST00000371447 TXLNAP40222 546 aa13.31□□□□□ -0.28
PDE6C-201ENST00000371447 TTBK2Q6IQ55 1244 aa13.31□□□□□ -0.28
PDE6C-201ENST00000371447 KCTD1Q719H9 257 aa13.31□□□□□ -0.28
PDE6C-201ENST00000371447 DGKHQ86XP1 1220 aa13.31□□□□□ -0.28
PDE6C-201ENST00000371447 PROM2Q8N271 834 aa13.31□□□□□ -0.28
PDE6C-201ENST00000371447 BPIFA3Q9BQP9 254 aa13.31□□□□□ -0.28
PDE6C-201ENST00000371447 DDX4Q9NQI0 724 aaKnown RBP13.31□□□□□ -0.28
PDE6C-201ENST00000371447 PCDHA4Q9UN74 947 aa13.31□□□□□ -0.28
PDE6C-201ENST00000371447 TNNI2P48788 182 aa13.31□□□□□ -0.28
PDE6C-201ENST00000371447 NFIAQ12857 509 aa13.31□□□□□ -0.28
PDE6C-201ENST00000371447 VSTM4Q8IW00 320 aa13.31□□□□□ -0.28
PDE6C-201ENST00000371447 FERMT2Q96AC1 680 aa13.31□□□□□ -0.28
PDE6C-201ENST00000371447 IRX2Q9BZI1 471 aaPredicted RBP13.31□□□□□ -0.28
PDE6C-201ENST00000371447 OSBPL5Q9H0X9 879 aaPredicted RBP13.31□□□□□ -0.28
PDE6C-201ENST00000371447 MKRN1Q9UHC7 482 aaKnown RBP13.31□□□□□ -0.28
PDE6C-201ENST00000371447 PCDHA6Q9UN73 950 aa13.31□□□□□ -0.28
PDE6C-201ENST00000371447 PCDHA8Q9Y5H6 950 aa13.31□□□□□ -0.28
PDE6C-201ENST00000371447 LRP5O75197 1615 aa13.3□□□□□ -0.28
PDE6C-201ENST00000371447 C4AP0C0L4 1744 aa13.3□□□□□ -0.28
PDE6C-201ENST00000371447 C4BP0C0L5 1744 aa13.3□□□□□ -0.28
PDE6C-201ENST00000371447 SSBP05455 408 aaKnown RBP eCLIP13.3□□□□□ -0.28
PDE6C-201ENST00000371447 ATP2C1P98194 919 aaPredicted RBP13.3□□□□□ -0.28
PDE6C-201ENST00000371447 IKQ13123 557 aaPredicted RBP13.3□□□□□ -0.28
PDE6C-201ENST00000371447 CCDC178Q5BJE1 867 aa13.3□□□□□ -0.28
PDE6C-201ENST00000371447 KANK3Q6NY19 840 aa13.3□□□□□ -0.28
PDE6C-201ENST00000371447 TNFRSF25Q93038 417 aa13.3□□□□□ -0.28
PDE6C-201ENST00000371447 MTRQ99707 1265 aa13.3□□□□□ -0.28
PDE6C-201ENST00000371447 DACH1Q9UI36 760 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms