RNA–Protein interactions for RNA: YOL038W

PRE6, Transcript of Alpha 4 subunit of the 20S proteasome, yeastyeast

Gene PRE6, Length 765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE6YOL038W RNQ1P25367 405 aa10.63□□□□□ -0.71
PRE6YOL038W SFP1P32432 683 aa10.63□□□□□ -0.71
PRE6YOL038W WBP1P33767 430 aaKnown RBP10.63□□□□□ -0.71
PRE6YOL038W GMH1P36125 273 aa10.63□□□□□ -0.71
PRE6YOL038W DBP8P38719 431 aa10.63□□□□□ -0.71
PRE6YOL038W CYC2P38909 366 aa10.63□□□□□ -0.71
PRE6YOL038W SEO1P39709 593 aa10.63□□□□□ -0.71
PRE6YOL038W YFL012WP43580 148 aa10.63□□□□□ -0.71
PRE6YOL038W PFA4Q12006 378 aa10.63□□□□□ -0.71
PRE6YOL038W RIP1P08067 215 aa10.62□□□□□ -0.71
PRE6YOL038W RED1P14291 827 aa10.62□□□□□ -0.71
PRE6YOL038W AMD1P15274 810 aaKnown RBP10.62□□□□□ -0.71
PRE6YOL038W YSR3P23501 404 aa10.62□□□□□ -0.71
PRE6YOL038W CWP1P28319 239 aa10.62□□□□□ -0.71
PRE6YOL038W PLC1P32383 869 aa10.62□□□□□ -0.71
PRE6YOL038W LDB7P38210 180 aa10.62□□□□□ -0.71
PRE6YOL038W YBR238CP38330 731 aaKnown RBP10.62□□□□□ -0.71
PRE6YOL038W ZIM17P42844 174 aa10.62□□□□□ -0.71
PRE6YOL038W YGL108CP53139 140 aa10.62□□□□□ -0.71
PRE6YOL038W TRS31Q03337 283 aa10.62□□□□□ -0.71
PRE6YOL038W GSF2Q04697 403 aaKnown RBP10.62□□□□□ -0.71
PRE6YOL038W ECI1Q05871 280 aa10.62□□□□□ -0.71
PRE6YOL038W IMA3P0CW40 589 aa10.61□□□□□ -0.71
PRE6YOL038W IMA4P0CW41 589 aa10.61□□□□□ -0.71
PRE6YOL038W CDC20P26309 610 aa10.61□□□□□ -0.71
PRE6YOL038W TFC3P34111 1160 aa10.61□□□□□ -0.71
PRE6YOL038W SMF2P38778 549 aa10.61□□□□□ -0.71
PRE6YOL038W SMF1P38925 575 aa10.61□□□□□ -0.71
PRE6YOL038W CCT6P39079 546 aa10.61□□□□□ -0.71
PRE6YOL038W IRR1P40541 1150 aa10.61□□□□□ -0.71
PRE6YOL038W APT1P49435 187 aaKnown RBP10.61□□□□□ -0.71
PRE6YOL038W CWC22P53333 577 aaKnown RBP10.61□□□□□ -0.71
PRE6YOL038W SML1Q04964 104 aa10.61□□□□□ -0.71
PRE6YOL038W PLB3Q08108 686 aa10.61□□□□□ -0.71
PRE6YOL038W IMA2Q08295 589 aa10.61□□□□□ -0.71
PRE6YOL038W ERG20P08524 352 aaKnown RBP10.6□□□□□ -0.71
PRE6YOL038W SCL1P21243 252 aaKnown RBP10.6□□□□□ -0.71
PRE6YOL038W NDI1P32340 513 aa10.6□□□□□ -0.71
PRE6YOL038W HEM12P32347 362 aaPredicted RBP10.6□□□□□ -0.71
PRE6YOL038W CTF13P35203 478 aa10.6□□□□□ -0.71
PRE6YOL038W KES1P35844 434 aaKnown RBP10.6□□□□□ -0.71
PRE6YOL038W MUM2P38236 366 aa10.6□□□□□ -0.71
PRE6YOL038W CEM1P39525 442 aa10.6□□□□□ -0.71
PRE6YOL038W SCC4P40090 624 aa10.6□□□□□ -0.71
PRE6YOL038W GTS1P40956 396 aa10.6□□□□□ -0.71
PRE6YOL038W ARP4P80428 489 aa10.6□□□□□ -0.71
PRE6YOL038W ECM9Q02202 377 aa10.6□□□□□ -0.71
PRE6YOL038W ARX1Q03862 593 aaKnown RBP10.6□□□□□ -0.71
PRE6YOL038W ERF2Q06551 359 aa10.6□□□□□ -0.71
PRE6YOL038W BUD7Q08754 746 aa10.6□□□□□ -0.71
PRE6YOL038W ACM1Q08981 209 aa10.6□□□□□ -0.71
PRE6YOL038W QCR6P00127 147 aa10.59□□□□□ -0.71
PRE6YOL038W ABF1P14164 731 aa10.59□□□□□ -0.71
PRE6YOL038W PET123P17558 318 aa10.59□□□□□ -0.71
PRE6YOL038W VPS34P22543 875 aa10.59□□□□□ -0.71
PRE6YOL038W SMI1P32566 505 aa10.59□□□□□ -0.71
PRE6YOL038W YER158CP40095 573 aa10.59□□□□□ -0.71
PRE6YOL038W DPH1P40487 425 aaKnown RBP10.59□□□□□ -0.71
PRE6YOL038W NUP85P46673 744 aa10.59□□□□□ -0.71
PRE6YOL038W NMD5P46970 1048 aa10.59□□□□□ -0.71
PRE6YOL038W BIR1P47134 954 aa10.59□□□□□ -0.71
PRE6YOL038W URH1Q04179 340 aa10.59□□□□□ -0.71
PRE6YOL038W YBR056W-AI2HB52 66 aa10.58□□□□□ -0.72
PRE6YOL038W VAN1P23642 535 aa10.58□□□□□ -0.72
PRE6YOL038W VHC1P38329 1120 aa10.58□□□□□ -0.72
PRE6YOL038W CFD1P40558 293 aa10.58□□□□□ -0.72
PRE6YOL038W ATG36P46983 293 aa10.58□□□□□ -0.72
PRE6YOL038W HST3P53687 447 aa10.58□□□□□ -0.72
PRE6YOL038W RCO1Q04779 684 aa10.58□□□□□ -0.72
PRE6YOL038W STP3Q05937 343 aa10.58□□□□□ -0.72
PRE6YOL038W CDC73Q06697 393 aa10.58□□□□□ -0.72
PRE6YOL038W YOL036WQ08206 761 aa10.58□□□□□ -0.72
PRE6YOL038W TGL5Q12043 749 aa10.58□□□□□ -0.72
PRE6YOL038W MCM16Q12262 181 aa10.58□□□□□ -0.72
PRE6YOL038W YML002WP0CF17 737 aa10.57□□□□□ -0.72
PRE6YOL038W HSP26P15992 214 aaKnown RBP RIP-Chip data10.57□□□□□ -0.72not detected
PRE6YOL038W STE4P18851 423 aa10.57□□□□□ -0.72
PRE6YOL038W DAL82P21705 255 aa10.57□□□□□ -0.72
PRE6YOL038W PHO84P25297 587 aaKnown RBP10.57□□□□□ -0.72
PRE6YOL038W YCL068CP25593 260 aa10.57□□□□□ -0.72
PRE6YOL038W MGT1P26188 188 aa10.57□□□□□ -0.72
PRE6YOL038W BEM1P29366 551 aa10.57□□□□□ -0.72
PRE6YOL038W LRG1P35688 1017 aa10.57□□□□□ -0.72
PRE6YOL038W DED81P38707 554 aaKnown RBP10.57□□□□□ -0.72
PRE6YOL038W STN1P38960 494 aa10.57□□□□□ -0.72
PRE6YOL038W CAJ1P39101 391 aa10.57□□□□□ -0.72
PRE6YOL038W YEL073CP39974 107 aa10.57□□□□□ -0.72
PRE6YOL038W ALG8P40351 577 aa10.57□□□□□ -0.72
PRE6YOL038W RPC17P47076 161 aa10.57□□□□□ -0.72
PRE6YOL038W EFM6P53970 246 aa10.57□□□□□ -0.72
PRE6YOL038W TGL2P54857 326 aa10.57□□□□□ -0.72
PRE6YOL038W ROT1Q03691 256 aa10.57□□□□□ -0.72
PRE6YOL038W ZRT2Q12436 422 aa10.57□□□□□ -0.72
PRE6YOL038W SKM1Q12469 655 aa10.57□□□□□ -0.72
PRE6YOL038W TEF1P02994 458 aaKnown RBP10.56□□□□□ -0.72
PRE6YOL038W CPA1P07258 411 aaKnown RBP10.56□□□□□ -0.72
PRE6YOL038W FUM1P08417 488 aaKnown RBP10.56□□□□□ -0.72
PRE6YOL038W CBF1P17106 351 aa10.56□□□□□ -0.72
PRE6YOL038W PHO3P24031 467 aa10.56□□□□□ -0.72
PRE6YOL038W TPS2P31688 896 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 5,963 RNA–protein pairs in 64.2 ms