RNA–Protein interactions for RNA: YMR200W

ROT1, Transcript of Molecular chaperone involved in protein folding in ER, yeastyeast

Gene ROT1, Length 771 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROT1YMR200W KEL2P50090 882 aa5.05□□□□□ -1.6
ROT1YMR200W UBC11P52492 156 aa5.05□□□□□ -1.6
ROT1YMR200W MDR1P53258 950 aa5.05□□□□□ -1.6
ROT1YMR200W RRN5Q02983 363 aa5.05□□□□□ -1.6
ROT1YMR200W VBA4Q04602 768 aaKnown RBP5.05□□□□□ -1.6
ROT1YMR200W SGO1Q08490 590 aa5.05□□□□□ -1.6
ROT1YMR200W LYS21Q12122 440 aaKnown RBP5.05□□□□□ -1.6
ROT1YMR200W PSY3Q12318 242 aa5.05□□□□□ -1.6
ROT1YMR200W TY2A-LR1P0C2J4 438 aa5.04□□□□□ -1.6
ROT1YMR200W TY2A-FP0CX61 438 aa5.04□□□□□ -1.6
ROT1YMR200W TY2A-GR2P0CX62 438 aa5.04□□□□□ -1.6
ROT1YMR200W ARG1P22768 420 aa5.04□□□□□ -1.6
ROT1YMR200W PHO84P25297 587 aaKnown RBP5.04□□□□□ -1.6
ROT1YMR200W TY2A-CP25383 438 aa5.04□□□□□ -1.6
ROT1YMR200W URA7P28274 579 aaKnown RBP5.04□□□□□ -1.6
ROT1YMR200W YEL043WP32618 956 aa5.04□□□□□ -1.6
ROT1YMR200W PCH2P38126 564 aa5.04□□□□□ -1.6
ROT1YMR200W TDP1P38319 544 aa5.04□□□□□ -1.6
ROT1YMR200W MUP3P38734 546 aa5.04□□□□□ -1.6
ROT1YMR200W YHR054CP38780 354 aa5.04□□□□□ -1.6
ROT1YMR200W SPT8P38915 602 aa5.04□□□□□ -1.6
ROT1YMR200W MKT1P40850 830 aaKnown RBP5.04□□□□□ -1.6
ROT1YMR200W TCB2P48231 1178 aa5.04□□□□□ -1.6
ROT1YMR200W PEF1P53238 335 aa5.04□□□□□ -1.6
ROT1YMR200W TY2A-DR2Q03483 438 aa5.04□□□□□ -1.6
ROT1YMR200W LUC7Q07508 261 aaPredicted RBP5.04□□□□□ -1.6
ROT1YMR200W RTC5Q12108 567 aaKnown RBP5.04□□□□□ -1.6
ROT1YMR200W TY2A-BQ12260 438 aa5.04□□□□□ -1.6
ROT1YMR200W TY2A-OR2Q12293 438 aa5.04□□□□□ -1.6
ROT1YMR200W TY2A-DR1Q12392 438 aa5.04□□□□□ -1.6
ROT1YMR200W TY2A-OR1Q12439 438 aa5.04□□□□□ -1.6
ROT1YMR200W SEC39Q12745 709 aa5.04□□□□□ -1.6
ROT1YMR200W AFI1Q99222 893 aa5.04□□□□□ -1.6
ROT1YMR200W TY2A-DR3Q99303 438 aa5.04□□□□□ -1.6
ROT1YMR200W CET1O13297 549 aaPredicted RBP5.03□□□□□ -1.6
ROT1YMR200W BIK1P11709 440 aa5.03□□□□□ -1.6
ROT1YMR200W ADE2P21264 571 aaKnown RBP5.03□□□□□ -1.6
ROT1YMR200W CPR2P23285 205 aa5.03□□□□□ -1.6
ROT1YMR200W ERV1P27882 189 aa5.03□□□□□ -1.6
ROT1YMR200W PAP1P29468 568 aaKnown RBP5.03□□□□□ -1.6
ROT1YMR200W HEL1P36113 551 aa5.03□□□□□ -1.6
ROT1YMR200W DAD2P36162 133 aa5.03□□□□□ -1.6
ROT1YMR200W KTR3P38130 404 aaPredicted RBP5.03□□□□□ -1.6
ROT1YMR200W ARB1P40024 610 aaKnown RBP5.03□□□□□ -1.6
ROT1YMR200W RGI2P40188 164 aa5.03□□□□□ -1.6
ROT1YMR200W DOT5P40553 215 aa5.03□□□□□ -1.6
ROT1YMR200W ROK1P45818 564 aaPredicted RBP5.03□□□□□ -1.6
ROT1YMR200W PRP31P49704 494 aaPredicted RBP5.03□□□□□ -1.6
ROT1YMR200W TAF4P50105 388 aa5.03□□□□□ -1.6
ROT1YMR200W GLO1P50107 326 aa5.03□□□□□ -1.6
ROT1YMR200W MTL1P53214 551 aa5.03□□□□□ -1.6
ROT1YMR200W VTC3Q02725 835 aa5.03□□□□□ -1.6
ROT1YMR200W LGE1Q02796 332 aaKnown RBP5.03□□□□□ -1.6
ROT1YMR200W EFR3Q03653 782 aaKnown RBP5.03□□□□□ -1.6
ROT1YMR200W DON1Q05610 365 aa5.03□□□□□ -1.6
ROT1YMR200W RGC1Q06108 1083 aaKnown RBP5.03□□□□□ -1.6
ROT1YMR200W MMR1Q06324 491 aa5.03□□□□□ -1.6
ROT1YMR200W PML1Q07930 204 aaPredicted RBP5.03□□□□□ -1.6
ROT1YMR200W PLP2Q12017 286 aa5.03□□□□□ -1.6
ROT1YMR200W ICL2Q12031 575 aa5.03□□□□□ -1.6
ROT1YMR200W RPN5Q12250 445 aaKnown RBP5.03□□□□□ -1.6
ROT1YMR200W KAR3P17119 729 aa5.02□□□□□ -1.61
ROT1YMR200W MIC60P36112 540 aa5.02□□□□□ -1.61
ROT1YMR200W ALY1P36117 915 aa5.02□□□□□ -1.61
ROT1YMR200W UBP13P38187 747 aa5.02□□□□□ -1.61
ROT1YMR200W HSM3P38348 480 aa5.02□□□□□ -1.61
ROT1YMR200W YHR112CP38716 378 aa5.02□□□□□ -1.61
ROT1YMR200W ECM1P39715 212 aa5.02□□□□□ -1.61
ROT1YMR200W GSM1P42950 618 aa5.02□□□□□ -1.61
ROT1YMR200W LAM5P43560 674 aa5.02□□□□□ -1.61
ROT1YMR200W ZAP1P47043 880 aa5.02□□□□□ -1.61
ROT1YMR200W NUP84P52891 726 aa5.02□□□□□ -1.61
ROT1YMR200W VPS73P53142 486 aaKnown RBP5.02□□□□□ -1.61
ROT1YMR200W PRO2P54885 456 aaKnown RBP5.02□□□□□ -1.61
ROT1YMR200W RCR2Q03446 210 aaKnown RBP5.02□□□□□ -1.61
ROT1YMR200W MGR3Q04472 501 aa5.02□□□□□ -1.61
ROT1YMR200W ROY1Q04847 553 aa5.02□□□□□ -1.61
ROT1YMR200W THI22Q06490 572 aa5.02□□□□□ -1.61
ROT1YMR200W HER1Q12276 1246 aa5.02□□□□□ -1.61
ROT1YMR200W CTF3Q12748 733 aa5.02□□□□□ -1.61
ROT1YMR200W CTT1P06115 562 aa5.01□□□□□ -1.61
ROT1YMR200W PET123P17558 318 aa5.01□□□□□ -1.61
ROT1YMR200W IME1P21190 360 aa5.01□□□□□ -1.61
ROT1YMR200W ERG8P24521 451 aa5.01□□□□□ -1.61
ROT1YMR200W RRP43P25359 394 aaPredicted RBP5.01□□□□□ -1.61
ROT1YMR200W RPS7AP26786 190 aaKnown RBP5.01□□□□□ -1.61
ROT1YMR200W CUE2P36075 443 aaKnown RBP5.01□□□□□ -1.61
ROT1YMR200W ADH5P38113 351 aaKnown RBP5.01□□□□□ -1.61
ROT1YMR200W VID24P38263 362 aa5.01□□□□□ -1.61
ROT1YMR200W CBR1P38626 284 aaKnown RBP5.01□□□□□ -1.61
ROT1YMR200W SMC2P38989 1170 aaKnown RBP5.01□□□□□ -1.61
ROT1YMR200W TAH11P47112 604 aa5.01□□□□□ -1.61
ROT1YMR200W AAD10P47182 288 aa5.01□□□□□ -1.61
ROT1YMR200W SHE4P51534 789 aa5.01□□□□□ -1.61
ROT1YMR200W VPS4P52917 437 aa5.01□□□□□ -1.61
ROT1YMR200W CSL4P53859 292 aaPredicted RBP5.01□□□□□ -1.61
ROT1YMR200W TOF2Q02208 771 aa5.01□□□□□ -1.61
ROT1YMR200W VPS64Q03944 604 aa5.01□□□□□ -1.61
ROT1YMR200W RBA50Q04418 439 aa5.01□□□□□ -1.61
ROT1YMR200W DBP9Q06218 594 aaKnown RBP5.01□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms