RNA–Protein interactions for RNA: YMR043W

MCM1, Transcript of Transcription factor, yeast

Gene MCM1, Length 861 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MCM1	YMR043W	ADY4	Q05955	493 aa		4.39	□□□□□ -1.71
MCM1	YMR043W	VIP1	Q06685	1146 aa	Known RBP	4.39	□□□□□ -1.71
MCM1	YMR043W	CDA2	Q06703	312 aa		4.39	□□□□□ -1.71
MCM1	YMR043W	YLR358C	O13565	187 aa		4.38	□□□□□ -1.71
MCM1	YMR043W	TPK1	P06244	397 aa		4.38	□□□□□ -1.71
MCM1	YMR043W	GUK1	P15454	187 aa	Known RBP	4.38	□□□□□ -1.71
MCM1	YMR043W	PRP6	P19735	899 aa	Predicted RBP	4.38	□□□□□ -1.71
MCM1	YMR043W	MSS51	P32335	436 aa		4.38	□□□□□ -1.71
MCM1	YMR043W	TOD6	P34219	525 aa		4.38	□□□□□ -1.71
MCM1	YMR043W	RFC1	P38630	861 aa	Known RBP	4.38	□□□□□ -1.71
MCM1	YMR043W	BCD1	P38772	366 aa		4.38	□□□□□ -1.71
MCM1	YMR043W	NOP16	P40007	231 aa	Known RBP	4.38	□□□□□ -1.71
MCM1	YMR043W	TMN3	P40071	706 aa		4.38	□□□□□ -1.71
MCM1	YMR043W	BST1	P43571	1029 aa		4.38	□□□□□ -1.71
MCM1	YMR043W	IDS2	P46958	469 aa		4.38	□□□□□ -1.71
MCM1	YMR043W	RFX1	P48743	811 aa		4.38	□□□□□ -1.71
MCM1	YMR043W	UBC11	P52492	156 aa		4.38	□□□□□ -1.71
MCM1	YMR043W	CBK1	P53894	756 aa		4.38	□□□□□ -1.71
MCM1	YMR043W	TFC6	Q06339	672 aa		4.38	□□□□□ -1.71
MCM1	YMR043W	NBP2	Q12163	236 aa		4.38	□□□□□ -1.71
MCM1	YMR043W	ZRT2	Q12436	422 aa		4.38	□□□□□ -1.71
MCM1	YMR043W	YKL033W-A	Q86ZR7	236 aa		4.38	□□□□□ -1.71
MCM1	YMR043W	CDC31	P06704	161 aa	Known RBP	4.37	□□□□□ -1.71
MCM1	YMR043W	FUM1	P08417	488 aa	Known RBP	4.37	□□□□□ -1.71
MCM1	YMR043W	ABF1	P14164	731 aa		4.37	□□□□□ -1.71
MCM1	YMR043W	VPS34	P22543	875 aa		4.37	□□□□□ -1.71
MCM1	YMR043W	MAK31	P23059	88 aa		4.37	□□□□□ -1.71
MCM1	YMR043W	ARP2	P32381	391 aa	Known RBP	4.37	□□□□□ -1.71
MCM1	YMR043W	CBF2	P32504	956 aa		4.37	□□□□□ -1.71
MCM1	YMR043W	DSS4	P32601	143 aa		4.37	□□□□□ -1.71
MCM1	YMR043W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.37	□□□□□ -1.71	not detected
MCM1	YMR043W	LRO1	P40345	661 aa		4.37	□□□□□ -1.71
MCM1	YMR043W	RIC1	P40395	1056 aa		4.37	□□□□□ -1.71
MCM1	YMR043W	OPT1	P40897	799 aa		4.37	□□□□□ -1.71
MCM1	YMR043W	ART5	P53244	586 aa	Known RBP	4.37	□□□□□ -1.71
MCM1	YMR043W	YPL108W	Q02872	168 aa	Predicted RBP	4.37	□□□□□ -1.71
MCM1	YMR043W	CLU1	Q03690	1277 aa	Known RBP	4.37	□□□□□ -1.71
MCM1	YMR043W	SPC19	Q03954	165 aa		4.37	□□□□□ -1.71
MCM1	YMR043W	GSF2	Q04697	403 aa	Known RBP	4.37	□□□□□ -1.71
MCM1	YMR043W	MMR1	Q06324	491 aa		4.37	□□□□□ -1.71
MCM1	YMR043W	TRM8	Q12009	286 aa		4.37	□□□□□ -1.71
MCM1	YMR043W	LAS17	Q12446	633 aa		4.37	□□□□□ -1.71
MCM1	YMR043W	SEM1	O94742	89 aa		4.36	□□□□□ -1.71
MCM1	YMR043W	PET122	P10355	254 aa		4.36	□□□□□ -1.71
MCM1	YMR043W	SRP54	P20424	541 aa	Known RBP	4.36	□□□□□ -1.71
MCM1	YMR043W	SAN1	P22470	610 aa		4.36	□□□□□ -1.71
MCM1	YMR043W	PPZ1	P26570	692 aa		4.36	□□□□□ -1.71
MCM1	YMR043W	HIS7	P33734	552 aa	Known RBP	4.36	□□□□□ -1.71
MCM1	YMR043W	NUP120	P35729	1037 aa		4.36	□□□□□ -1.71
MCM1	YMR043W	MUD2	P36084	527 aa	Known RBP	4.36	□□□□□ -1.71
MCM1	YMR043W	SET3	P36124	751 aa		4.36	□□□□□ -1.71
MCM1	YMR043W	CTP1	P38152	299 aa		4.36	□□□□□ -1.71
MCM1	YMR043W	SUL1	P38359	859 aa		4.36	□□□□□ -1.71
MCM1	YMR043W	YEL068C	P39977	110 aa		4.36	□□□□□ -1.71
MCM1	YMR043W	FMP52	P40008	231 aa		4.36	□□□□□ -1.71
MCM1	YMR043W	HMF1	P40037	129 aa	Known RBP	4.36	□□□□□ -1.71
MCM1	YMR043W	DPH1	P40487	425 aa	Known RBP	4.36	□□□□□ -1.71
MCM1	YMR043W	SAD1	P43589	448 aa		4.36	□□□□□ -1.71
MCM1	YMR043W	YJL163C	P46996	555 aa		4.36	□□□□□ -1.71
MCM1	YMR043W	MPS3	P47069	682 aa		4.36	□□□□□ -1.71
MCM1	YMR043W	YGR054W	P53235	642 aa	Known RBP	4.36	□□□□□ -1.71
MCM1	YMR043W	YAP1802	P53309	568 aa		4.36	□□□□□ -1.71
MCM1	YMR043W	MYO5	Q04439	1219 aa	Known RBP	4.36	□□□□□ -1.71
MCM1	YMR043W	PIG1	Q06216	648 aa		4.36	□□□□□ -1.71
MCM1	YMR043W	SPN1	Q06505	410 aa	Predicted RBP	4.36	□□□□□ -1.71
MCM1	YMR043W	AIM6	Q07716	390 aa		4.36	□□□□□ -1.71
MCM1	YMR043W	SDH5	Q08230	162 aa		4.36	□□□□□ -1.71
MCM1	YMR043W	FMP27	Q06179	2628 aa		4.35	□□□□□ -1.71
MCM1	YMR043W	SIR3	P06701	978 aa		4.35	□□□□□ -1.71
MCM1	YMR043W	CDC16	P09798	840 aa		4.35	□□□□□ -1.71
MCM1	YMR043W	TVP38	P36164	337 aa		4.35	□□□□□ -1.71
MCM1	YMR043W	STB5	P38699	743 aa		4.35	□□□□□ -1.71
MCM1	YMR043W	KHA1	P40309	873 aa		4.35	□□□□□ -1.71
MCM1	YMR043W	ESL1	P40456	1118 aa		4.35	□□□□□ -1.71
MCM1	YMR043W	IST3	P40565	148 aa	Predicted RBP	4.35	□□□□□ -1.71
MCM1	YMR043W	ZAP1	P47043	880 aa		4.35	□□□□□ -1.71
MCM1	YMR043W	PSP1	P50896	841 aa	Known RBP	4.35	□□□□□ -1.71
MCM1	YMR043W	PAN2	P53010	1115 aa	Predicted RBP	4.35	□□□□□ -1.71
MCM1	YMR043W	BSC5	P53755	489 aa		4.35	□□□□□ -1.71
MCM1	YMR043W	HOF1	Q05080	669 aa		4.35	□□□□□ -1.71
MCM1	YMR043W	YLR455W	Q06188	304 aa		4.35	□□□□□ -1.71
MCM1	YMR043W	YSH1	Q06224	779 aa	Predicted RBP	4.35	□□□□□ -1.71
MCM1	YMR043W	ARR3	Q06598	404 aa		4.35	□□□□□ -1.71
MCM1	YMR043W	IRC13	Q08630	104 aa		4.35	□□□□□ -1.71
MCM1	YMR043W	FRE5	Q08908	694 aa		4.35	□□□□□ -1.71
MCM1	YMR043W	RIM20	Q12033	661 aa		4.35	□□□□□ -1.71
MCM1	YMR043W	COX17	Q12287	69 aa		4.35	□□□□□ -1.71
MCM1	YMR043W	YOR111W	Q99210	232 aa		4.35	□□□□□ -1.71
MCM1	YMR043W	YLR302C	O13544	120 aa		4.34	□□□□□ -1.71
MCM1	YMR043W	AAC3	P18238	307 aa		4.34	□□□□□ -1.71
MCM1	YMR043W	MBR1	P23493	339 aa		4.34	□□□□□ -1.71
MCM1	YMR043W	ADK2	P26364	225 aa		4.34	□□□□□ -1.71
MCM1	YMR043W	CAP1	P28495	268 aa	Known RBP	4.34	□□□□□ -1.71
MCM1	YMR043W	EFT1	P32324	842 aa	Known RBP	4.34	□□□□□ -1.71
MCM1	YMR043W	MSS1	P32559	526 aa	Predicted RBP	4.34	□□□□□ -1.71
MCM1	YMR043W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.34	□□□□□ -1.71	not detected
MCM1	YMR043W	YTA12	P40341	825 aa		4.34	□□□□□ -1.71
MCM1	YMR043W	BUL1	P48524	976 aa		4.34	□□□□□ -1.71
MCM1	YMR043W	ALT2	P52892	507 aa		4.34	□□□□□ -1.71
MCM1	YMR043W	RNT1	Q02555	471 aa		4.34	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms