RNA–Protein interactions for RNA: YLR097C

HRT3, Transcript of Putative SCF-ubiquitin ligase F-box protein, yeast

Gene HRT3, Length 1,035 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HRT3	YLR097C	RIM13	Q03792	727 aa		4.82	□□□□□ -1.64
HRT3	YLR097C	TMA64	Q04600	565 aa	Known RBP	4.82	□□□□□ -1.64
HRT3	YLR097C	YDR056C	Q12025	205 aa		4.82	□□□□□ -1.64
HRT3	YLR097C	CDC24	P11433	854 aa	Predicted RBP	4.81	□□□□□ -1.64
HRT3	YLR097C	PRE8	P23639	250 aa		4.81	□□□□□ -1.64
HRT3	YLR097C	ALY1	P36117	915 aa		4.81	□□□□□ -1.64
HRT3	YLR097C	ADE17	P38009	592 aa	Known RBP	4.81	□□□□□ -1.64
HRT3	YLR097C	UBP13	P38187	747 aa		4.81	□□□□□ -1.64
HRT3	YLR097C	YEL068C	P39977	110 aa		4.81	□□□□□ -1.64
HRT3	YLR097C	YNR061C	P53747	219 aa		4.81	□□□□□ -1.64
HRT3	YLR097C	RSM28	Q03430	361 aa		4.81	□□□□□ -1.64
HRT3	YLR097C	YBR085C-A	O43137	85 aa		4.8	□□□□□ -1.64
HRT3	YLR097C	MUD2	P36084	527 aa	Known RBP	4.8	□□□□□ -1.64
HRT3	YLR097C	FMP10	P40098	244 aa		4.8	□□□□□ -1.64
HRT3	YLR097C	RPN11	P43588	306 aa	Known RBP	4.8	□□□□□ -1.64
HRT3	YLR097C	AAD10	P47182	288 aa		4.8	□□□□□ -1.64
HRT3	YLR097C	PIL1	P53252	339 aa	Known RBP	4.8	□□□□□ -1.64
HRT3	YLR097C	ERG13	P54839	491 aa	Known RBP	4.8	□□□□□ -1.64
HRT3	YLR097C	PDR8	Q06149	701 aa		4.8	□□□□□ -1.64
HRT3	YLR097C	ENT1	Q12518	454 aa		4.8	□□□□□ -1.64
HRT3	YLR097C	CDC16	P09798	840 aa		4.79	□□□□□ -1.64
HRT3	YLR097C	ARN1	P38731	627 aa		4.79	□□□□□ -1.64
HRT3	YLR097C	NOP16	P40007	231 aa	Known RBP	4.79	□□□□□ -1.64
HRT3	YLR097C	LTP1	P40347	161 aa		4.79	□□□□□ -1.64
HRT3	YLR097C	ULP2	P40537	1034 aa	Predicted RBP	4.79	□□□□□ -1.64
HRT3	YLR097C	CDC1	P40986	491 aa		4.79	□□□□□ -1.64
HRT3	YLR097C	IST1	P53843	298 aa	Predicted RBP	4.79	□□□□□ -1.64
HRT3	YLR097C	RSC9	Q03124	581 aa		4.79	□□□□□ -1.64
HRT3	YLR097C	GPN2	Q08726	347 aa	Predicted RBP	4.79	□□□□□ -1.64
HRT3	YLR097C	YLR049C	Q12110	428 aa		4.79	□□□□□ -1.64
HRT3	YLR097C	GET3	Q12154	354 aa	Known RBP	4.79	□□□□□ -1.64
HRT3	YLR097C	YOR111W	Q99210	232 aa		4.79	□□□□□ -1.64
HRT3	YLR097C	COQ3	P27680	312 aa		4.78	□□□□□ -1.64
HRT3	YLR097C	PAH1	P32567	862 aa		4.78	□□□□□ -1.64
HRT3	YLR097C	OCT1	P35999	772 aa		4.78	□□□□□ -1.64
HRT3	YLR097C	ECM10	P39987	644 aa		4.78	□□□□□ -1.64
HRT3	YLR097C	SEC24	P40482	926 aa	Known RBP	4.78	□□□□□ -1.64
HRT3	YLR097C	XBP1	P40489	647 aa		4.78	□□□□□ -1.64
HRT3	YLR097C	LYS14	P40971	790 aa		4.78	□□□□□ -1.64
HRT3	YLR097C	YJL107C	P42947	387 aa		4.78	□□□□□ -1.64
HRT3	YLR097C	INN1	P53901	409 aa		4.78	□□□□□ -1.64
HRT3	YLR097C	SKG3	Q06315	1026 aa		4.78	□□□□□ -1.64
HRT3	YLR097C	ENT4	Q07872	247 aa		4.78	□□□□□ -1.64
HRT3	YLR097C	MCH4	Q08268	501 aa		4.78	□□□□□ -1.64
HRT3	YLR097C	HXK2	P04807	486 aa	Known RBP	4.77	□□□□□ -1.65
HRT3	YLR097C	YMR085W	P0CF18	432 aa		4.77	□□□□□ -1.65
HRT3	YLR097C	YCR006C	P25350	157 aa		4.77	□□□□□ -1.65
HRT3	YLR097C	ESL2	P36168	1195 aa		4.77	□□□□□ -1.65
HRT3	YLR097C	TPA1	P40032	644 aa	Known RBP	4.77	□□□□□ -1.65
HRT3	YLR097C	CTK2	P46962	323 aa		4.77	□□□□□ -1.65
HRT3	YLR097C	INA17	Q02888	182 aa		4.77	□□□□□ -1.65
HRT3	YLR097C	YLR455W	Q06188	304 aa		4.77	□□□□□ -1.65
HRT3	YLR097C	VIP1	Q06685	1146 aa	Known RBP	4.77	□□□□□ -1.65
HRT3	YLR097C	SEM1	O94742	89 aa		4.76	□□□□□ -1.65
HRT3	YLR097C	PET111	P08468	800 aa		4.76	□□□□□ -1.65
HRT3	YLR097C	SAN1	P22470	610 aa		4.76	□□□□□ -1.65
HRT3	YLR097C	PSA1	P41940	361 aa	Known RBP	4.76	□□□□□ -1.65
HRT3	YLR097C	YSA1	Q01976	231 aa		4.76	□□□□□ -1.65
HRT3	YLR097C	PFA5	Q03289	374 aa		4.76	□□□□□ -1.65
HRT3	YLR097C	RAD30	Q04049	632 aa		4.76	□□□□□ -1.65
HRT3	YLR097C	RIX7	Q07844	837 aa	Known RBP	4.76	□□□□□ -1.65
HRT3	YLR097C	TCO89	Q08921	799 aa		4.76	□□□□□ -1.65
HRT3	YLR097C	PFA4	Q12006	378 aa		4.76	□□□□□ -1.65
HRT3	YLR097C	CRC1	Q12289	327 aa		4.76	□□□□□ -1.65
HRT3	YLR097C	RRI2	Q12348	645 aa		4.76	□□□□□ -1.65
HRT3	YLR097C	RPL19A	P0CX82	189 aa	Known RBP	4.75	□□□□□ -1.65
HRT3	YLR097C	RPL19B	P0CX83	189 aa	Predicted RBP	4.75	□□□□□ -1.65
HRT3	YLR097C	PTP1	P25044	335 aa		4.75	□□□□□ -1.65
HRT3	YLR097C	YBL029W	P38201	376 aa		4.75	□□□□□ -1.65
HRT3	YLR097C	YNG2	P38806	282 aa	Known RBP	4.75	□□□□□ -1.65
HRT3	YLR097C	RTS1	P38903	757 aa		4.75	□□□□□ -1.65
HRT3	YLR097C	BNA3	P47039	444 aa	Known RBP	4.75	□□□□□ -1.65
HRT3	YLR097C	UBP8	P50102	471 aa		4.75	□□□□□ -1.65
HRT3	YLR097C	YGL036W	P53185	909 aa	Predicted RBP	4.75	□□□□□ -1.65
HRT3	YLR097C	COP1	P53622	1201 aa	Known RBP	4.75	□□□□□ -1.65
HRT3	YLR097C	YKU80	Q04437	629 aa		4.75	□□□□□ -1.65
HRT3	YLR097C	PIG1	Q06216	648 aa		4.75	□□□□□ -1.65
HRT3	YLR097C	PSR1	Q07800	427 aa		4.75	□□□□□ -1.65
HRT3	YLR097C	HUA2	Q12134	243 aa		4.75	□□□□□ -1.65
HRT3	YLR097C	YBR126W-A	Q8TGU7	68 aa		4.75	□□□□□ -1.65
HRT3	YLR097C	GPA1	P08539	472 aa		4.74	□□□□□ -1.65
HRT3	YLR097C	AAC3	P18238	307 aa		4.74	□□□□□ -1.65
HRT3	YLR097C	IMP2'	P32351	346 aa		4.74	□□□□□ -1.65
HRT3	YLR097C	PDB1	P32473	366 aa	Known RBP	4.74	□□□□□ -1.65
HRT3	YLR097C	PKP1	P40530	394 aa		4.74	□□□□□ -1.65
HRT3	YLR097C	CFD1	P40558	293 aa		4.74	□□□□□ -1.65
HRT3	YLR097C	YFR020W	P43600	232 aa		4.74	□□□□□ -1.65
HRT3	YLR097C	DPB11	P47027	764 aa	Predicted RBP	4.74	□□□□□ -1.65
HRT3	YLR097C	SWF1	Q04629	336 aa		4.74	□□□□□ -1.65
HRT3	YLR097C	RRI1	Q12468	440 aa		4.74	□□□□□ -1.65
HRT3	YLR097C	YER145C-A	A0A023PYF4	145 aa		4.73	□□□□□ -1.65
HRT3	YLR097C	CHO1	P08456	276 aa		4.73	□□□□□ -1.65
HRT3	YLR097C	RAP1	P11938	827 aa		4.73	□□□□□ -1.65
HRT3	YLR097C	YAP1	P19880	650 aa	Known RBP	4.73	□□□□□ -1.65
HRT3	YLR097C	CNA1	P23287	553 aa		4.73	□□□□□ -1.65
HRT3	YLR097C	SAC6	P32599	642 aa	Known RBP	4.73	□□□□□ -1.65
HRT3	YLR097C	PXL1	P36166	706 aa		4.73	□□□□□ -1.65
HRT3	YLR097C	NOP4	P37838	685 aa	Known RBP	4.73	□□□□□ -1.65
HRT3	YLR097C	AGP2	P38090	596 aa		4.73	□□□□□ -1.65
HRT3	YLR097C	MAL33	P38157	468 aa		4.73	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 105.1 ms