RNA–Protein interactions for RNA: YLR040C

AFB1, Transcript of MATalpha-specific a-factor blocker, yeastyeast

Gene AFB1, Length 675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFB1YLR040C TY2A-CP25383 438 aa3.06□□□□□ -1.92
AFB1YLR040C NUP120P35729 1037 aa3.06□□□□□ -1.92
AFB1YLR040C LEU5P38702 357 aa3.06□□□□□ -1.92
AFB1YLR040C TES1P41903 349 aaKnown RBP3.06□□□□□ -1.92
AFB1YLR040C VPS25P47142 202 aa3.06□□□□□ -1.92
AFB1YLR040C TY2A-DR2Q03483 438 aa3.06□□□□□ -1.92
AFB1YLR040C CAC2Q04199 468 aa3.06□□□□□ -1.92
AFB1YLR040C SWF1Q04629 336 aa3.06□□□□□ -1.92
AFB1YLR040C MLH2Q07980 695 aa3.06□□□□□ -1.92
AFB1YLR040C TY2A-BQ12260 438 aa3.06□□□□□ -1.92
AFB1YLR040C TY2A-OR2Q12293 438 aa3.06□□□□□ -1.92
AFB1YLR040C TY2A-DR1Q12392 438 aa3.06□□□□□ -1.92
AFB1YLR040C TY2A-OR1Q12439 438 aa3.06□□□□□ -1.92
AFB1YLR040C TY2A-DR3Q99303 438 aa3.06□□□□□ -1.92
AFB1YLR040C TKL1P23254 680 aaKnown RBP3.05□□□□□ -1.92
AFB1YLR040C STE50P25344 346 aa3.05□□□□□ -1.92
AFB1YLR040C MRPL36P36531 177 aa3.05□□□□□ -1.92
AFB1YLR040C ARC40P38328 384 aaKnown RBP3.05□□□□□ -1.92
AFB1YLR040C PSD1P39006 500 aa3.05□□□□□ -1.92
AFB1YLR040C BNA1P47096 177 aa3.05□□□□□ -1.92
AFB1YLR040C YNR061CP53747 219 aa3.05□□□□□ -1.92
AFB1YLR040C IZH1Q03419 316 aa3.05□□□□□ -1.92
AFB1YLR040C NUP53Q03790 475 aa3.05□□□□□ -1.92
AFB1YLR040C IOC4Q04213 475 aa3.05□□□□□ -1.92
AFB1YLR040C ECM16Q04217 1267 aaKnown RBP3.05□□□□□ -1.92
AFB1YLR040C DSE3Q08729 430 aa3.05□□□□□ -1.92
AFB1YLR040C YLR049CQ12110 428 aa3.05□□□□□ -1.92
AFB1YLR040C TPK1P06244 397 aa3.04□□□□□ -1.92
AFB1YLR040C SRB5P32585 307 aa3.04□□□□□ -1.92
AFB1YLR040C NTR2P36118 322 aaPredicted RBP3.04□□□□□ -1.92
AFB1YLR040C MET30P39014 640 aa3.04□□□□□ -1.92
AFB1YLR040C IES5P40060 125 aa3.04□□□□□ -1.92
AFB1YLR040C TPM2P40414 161 aa3.04□□□□□ -1.92
AFB1YLR040C STB2P46679 850 aa3.04□□□□□ -1.92
AFB1YLR040C DIG1Q03063 452 aaKnown RBP3.04□□□□□ -1.92
AFB1YLR040C PFA5Q03289 374 aa3.04□□□□□ -1.92
AFB1YLR040C TRM8Q12009 286 aa3.04□□□□□ -1.92
AFB1YLR040C CBP1P07252 654 aa3.03□□□□□ -1.92
AFB1YLR040C ERG8P24521 451 aa3.03□□□□□ -1.92
AFB1YLR040C LHS1P36016 881 aa3.03□□□□□ -1.92
AFB1YLR040C AAP1P37898 856 aaKnown RBP3.03□□□□□ -1.92
AFB1YLR040C MNN2P38069 597 aa3.03□□□□□ -1.92
AFB1YLR040C SEC31P38968 1273 aaKnown RBP3.03□□□□□ -1.92
AFB1YLR040C PCL6P40038 420 aa3.03□□□□□ -1.92
AFB1YLR040C SMK1P41808 388 aa3.03□□□□□ -1.92
AFB1YLR040C ASE1P50275 885 aa3.03□□□□□ -1.92
AFB1YLR040C PSP1P50896 841 aaKnown RBP3.03□□□□□ -1.92
AFB1YLR040C ESBP6P53918 673 aa3.03□□□□□ -1.92
AFB1YLR040C RSM28Q03430 361 aa3.03□□□□□ -1.92
AFB1YLR040C ARP9Q05123 467 aa3.03□□□□□ -1.92
AFB1YLR040C CSR1Q06705 408 aaKnown RBP3.03□□□□□ -1.92
AFB1YLR040C NDD1Q08887 554 aa3.03□□□□□ -1.92
AFB1YLR040C SNF1P06782 633 aaKnown RBP3.02□□□□□ -1.93
AFB1YLR040C RAD16P31244 790 aa3.02□□□□□ -1.93
AFB1YLR040C XRS2P33301 854 aa3.02□□□□□ -1.93
AFB1YLR040C SOF1P33750 489 aaKnown RBP3.02□□□□□ -1.93
AFB1YLR040C GCS1P35197 352 aa3.02□□□□□ -1.93
AFB1YLR040C ECM10P39987 644 aa3.02□□□□□ -1.93
AFB1YLR040C MRX1P40050 688 aa3.02□□□□□ -1.93
AFB1YLR040C HXT9P40885 567 aa3.02□□□□□ -1.93
AFB1YLR040C CTK2P46962 323 aa3.02□□□□□ -1.93
AFB1YLR040C CTF18P49956 741 aa3.02□□□□□ -1.93
AFB1YLR040C REG1Q00816 1014 aa3.02□□□□□ -1.93
AFB1YLR040C YOL159CQ08300 171 aa3.02□□□□□ -1.93
AFB1YLR040C YIL169CP40442 995 aa3.01□□□□□ -1.93
AFB1YLR040C IST3P40565 148 aaPredicted RBP3.01□□□□□ -1.93
AFB1YLR040C YFR020WP43600 232 aa3.01□□□□□ -1.93
AFB1YLR040C YTP1P53584 459 aa3.01□□□□□ -1.93
AFB1YLR040C MAK10Q02197 733 aa3.01□□□□□ -1.93
AFB1YLR040C ERG27Q12452 347 aaKnown RBP3.01□□□□□ -1.93
AFB1YLR040C YOR019WQ99248 730 aa3.01□□□□□ -1.93
AFB1YLR040C VCX1Q99385 411 aa3.01□□□□□ -1.93
AFB1YLR040C SAC1P32368 623 aaKnown RBP3□□□□□ -1.93
AFB1YLR040C TFC3P34111 1160 aa3□□□□□ -1.93
AFB1YLR040C PTH2P34222 208 aa3□□□□□ -1.93
AFB1YLR040C YND1P40009 630 aa3□□□□□ -1.93
AFB1YLR040C VRG4P40107 337 aa3□□□□□ -1.93
AFB1YLR040C PFK26P40433 827 aaKnown RBP3□□□□□ -1.93
AFB1YLR040C SAP185P40856 1058 aa3□□□□□ -1.93
AFB1YLR040C SMA1Q02651 245 aa3□□□□□ -1.93
AFB1YLR040C FCP1Q03254 732 aa3□□□□□ -1.93
AFB1YLR040C ECI1Q05871 280 aa3□□□□□ -1.93
AFB1YLR040C PSK2Q08217 1101 aa3□□□□□ -1.93
AFB1YLR040C NRT1Q08485 598 aa3□□□□□ -1.93
AFB1YLR040C GPN2Q08726 347 aaPredicted RBP3□□□□□ -1.93
AFB1YLR040C APL5Q08951 932 aaKnown RBP3□□□□□ -1.93
AFB1YLR040C PFK2P16862 959 aaKnown RBP RIP-Chip data2.99□□□□□ -1.93not detected
AFB1YLR040C PSY4P38193 441 aa2.99□□□□□ -1.93
AFB1YLR040C MAF1P41910 395 aa2.99□□□□□ -1.93
AFB1YLR040C RPN11P43588 306 aaKnown RBP2.99□□□□□ -1.93
AFB1YLR040C SGF73P53165 657 aa2.99□□□□□ -1.93
AFB1YLR040C BET4Q00618 327 aa2.99□□□□□ -1.93
AFB1YLR040C ATG16Q03818 150 aa2.99□□□□□ -1.93
AFB1YLR040C ARP10Q04549 284 aa2.99□□□□□ -1.93
AFB1YLR040C YMR254CQ04838 102 aa2.99□□□□□ -1.93
AFB1YLR040C VID22Q05934 901 aa2.99□□□□□ -1.93
AFB1YLR040C UTP21Q06078 939 aaPredicted RBP2.99□□□□□ -1.93
AFB1YLR040C SSM4P40318 1319 aa2.98□□□□□ -1.93
AFB1YLR040C RAP1P11938 827 aa2.98□□□□□ -1.93
AFB1YLR040C CLB2P24869 491 aa2.98□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 14 ms