RNA–Protein interactions for RNA: YLR006C

SSK1, Transcript of Cytoplasmic phosphorelay intermediate osmosensor and regulator, yeastyeast

Gene SSK1, Length 2,139 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK1YLR006C SEN2P16658 377 aa5.86□□□□□ -1.47
SSK1YLR006C MGT1P26188 188 aa5.86□□□□□ -1.47
SSK1YLR006C TPS2P31688 896 aaKnown RBP5.86□□□□□ -1.47
SSK1YLR006C PIN4P34217 668 aaKnown RBP RIP-Chip data5.86□□□□□ -1.47not detected
SSK1YLR006C ERT1P38140 529 aa5.86□□□□□ -1.47
SSK1YLR006C COS111P38308 924 aa5.86□□□□□ -1.47
SSK1YLR006C POP4P38336 279 aa5.86□□□□□ -1.47
SSK1YLR006C LIF1P53150 421 aa5.86□□□□□ -1.47
SSK1YLR006C SSL1Q04673 461 aaPredicted RBP5.86□□□□□ -1.47
SSK1YLR006C RTN1Q04947 295 aaKnown RBP5.86□□□□□ -1.47
SSK1YLR006C NBA1Q08229 501 aaKnown RBP5.86□□□□□ -1.47
SSK1YLR006C CIR2Q08822 631 aa5.86□□□□□ -1.47
SSK1YLR006C TGL5Q12043 749 aa5.86□□□□□ -1.47
SSK1YLR006C RTN2Q12443 393 aa5.86□□□□□ -1.47
SSK1YLR006C RRD2Q12461 358 aa5.86□□□□□ -1.47
SSK1YLR006C TEF1P02994 458 aaKnown RBP5.86□□□□□ -1.47
SSK1YLR006C FBP1P09201 348 aa5.86□□□□□ -1.47
SSK1YLR006C GCD2P12754 651 aaPredicted RBP5.86□□□□□ -1.47
SSK1YLR006C KSS1P14681 368 aa5.86□□□□□ -1.47
SSK1YLR006C SEG2P34250 1132 aa5.86□□□□□ -1.47
SSK1YLR006C DSS1P39112 969 aa5.86□□□□□ -1.47
SSK1YLR006C NTA1P40354 457 aa5.86□□□□□ -1.47
SSK1YLR006C FIS1P40515 155 aa5.86□□□□□ -1.47
SSK1YLR006C RLP7P40693 322 aaKnown RBP5.86□□□□□ -1.47
SSK1YLR006C YNL040WP53960 456 aaPredicted RBP5.86□□□□□ -1.47
SSK1YLR006C RPL22BP56628 122 aaKnown RBP5.86□□□□□ -1.47
SSK1YLR006C RPA49Q01080 415 aaPredicted RBP5.86□□□□□ -1.47
SSK1YLR006C ULP1Q02724 621 aa5.86□□□□□ -1.47
SSK1YLR006C YDR222WQ04925 415 aa5.86□□□□□ -1.47
SSK1YLR006C PUF3Q07807 879 aaKnown RBP RIP-Chip data5.86□□□□□ -1.47not detected
SSK1YLR006C FMP40Q08968 688 aaPredicted RBP5.86□□□□□ -1.47
SSK1YLR006C VPS54Q12071 889 aa5.86□□□□□ -1.47
SSK1YLR006C SAM1P10659 382 aaKnown RBP5.85□□□□□ -1.47
SSK1YLR006C RAP1P11938 827 aa5.85□□□□□ -1.47
SSK1YLR006C TCP1P12612 559 aaKnown RBP5.85□□□□□ -1.47
SSK1YLR006C IME1P21190 360 aa5.85□□□□□ -1.47
SSK1YLR006C CLB4P24871 460 aa5.85□□□□□ -1.47
SSK1YLR006C PRP19P32523 503 aaKnown RBP5.85□□□□□ -1.47
SSK1YLR006C MRP8P35719 219 aa5.85□□□□□ -1.47
SSK1YLR006C MRPL40P36534 297 aa5.85□□□□□ -1.47
SSK1YLR006C SOH1P38633 127 aa5.85□□□□□ -1.47
SSK1YLR006C KEL1P38853 1164 aaKnown RBP5.85□□□□□ -1.47
SSK1YLR006C AVT1P47082 602 aa5.85□□□□□ -1.47
SSK1YLR006C EAF6P47128 113 aa5.85□□□□□ -1.47
SSK1YLR006C CTR1P49573 406 aa5.85□□□□□ -1.47
SSK1YLR006C TAM41P53230 385 aa5.85□□□□□ -1.47
SSK1YLR006C BET4Q00618 327 aa5.85□□□□□ -1.47
SSK1YLR006C CIK1Q01649 594 aa5.85□□□□□ -1.47
SSK1YLR006C TRM44Q02648 567 aaKnown RBP5.85□□□□□ -1.47
SSK1YLR006C LGE1Q02796 332 aaKnown RBP5.85□□□□□ -1.47
SSK1YLR006C DUS4Q06063 367 aa5.85□□□□□ -1.47
SSK1YLR006C CUR1Q06469 252 aa5.85□□□□□ -1.47
SSK1YLR006C YTM1Q12024 460 aaPredicted RBP5.85□□□□□ -1.47
SSK1YLR006C TGS1Q12052 315 aa5.85□□□□□ -1.47
SSK1YLR006C RIF1P29539 1916 aa5.85□□□□□ -1.47
SSK1YLR006C MST1P07236 462 aa5.84□□□□□ -1.47
SSK1YLR006C HEM15P16622 393 aa5.84□□□□□ -1.47
SSK1YLR006C RPC19P28000 142 aaKnown RBP5.84□□□□□ -1.47
SSK1YLR006C ISC10P32645 267 aa5.84□□□□□ -1.47
SSK1YLR006C CBR1P38626 284 aaKnown RBP5.84□□□□□ -1.47
SSK1YLR006C YHR054CP38780 354 aa5.84□□□□□ -1.47
SSK1YLR006C REV7P38927 245 aa5.84□□□□□ -1.47
SSK1YLR006C RGA1P39083 1007 aa5.84□□□□□ -1.47
SSK1YLR006C UTP7P40055 554 aaKnown RBP5.84□□□□□ -1.47
SSK1YLR006C ASG1P40467 964 aa5.84□□□□□ -1.47
SSK1YLR006C YIL001WP40560 513 aa5.84□□□□□ -1.47
SSK1YLR006C CPR7P47103 393 aa5.84□□□□□ -1.47
SSK1YLR006C RSM26P47141 266 aa5.84□□□□□ -1.47
SSK1YLR006C INP52P50942 1183 aa5.84□□□□□ -1.47
SSK1YLR006C SOL4P53315 255 aa5.84□□□□□ -1.47
SSK1YLR006C ATP25Q03153 612 aa5.84□□□□□ -1.47
SSK1YLR006C MRPS17Q03246 237 aaPredicted RBP5.84□□□□□ -1.47
SSK1YLR006C YMR027WQ04371 470 aa5.84□□□□□ -1.47
SSK1YLR006C URC2Q04411 772 aa5.84□□□□□ -1.47
SSK1YLR006C MGR3Q04472 501 aa5.84□□□□□ -1.47
SSK1YLR006C CRF1Q04930 467 aa5.84□□□□□ -1.47
SSK1YLR006C YPR109WQ06104 294 aa5.84□□□□□ -1.47
SSK1YLR006C SPH1Q06160 661 aa5.84□□□□□ -1.47
SSK1YLR006C ISA2Q12425 185 aa5.84□□□□□ -1.47
SSK1YLR006C YOL159C-AQ3E769 90 aa5.84□□□□□ -1.47
SSK1YLR006C HBN1Q96VH4 193 aa5.84□□□□□ -1.47
SSK1YLR006C DSF1P0CX08 502 aa5.84□□□□□ -1.47
SSK1YLR006C YNR073CP0CX09 502 aa5.84□□□□□ -1.47
SSK1YLR006C NCP1P16603 691 aaKnown RBP5.84□□□□□ -1.47
SSK1YLR006C DAL81P21657 970 aa5.84□□□□□ -1.47
SSK1YLR006C SLY41P22215 453 aa5.84□□□□□ -1.47
SSK1YLR006C SGF29P25554 259 aa5.84□□□□□ -1.47
SSK1YLR006C MCM5P29496 775 aaKnown RBP5.84□□□□□ -1.47
SSK1YLR006C HBS1P32769 611 aaKnown RBP5.84□□□□□ -1.47
SSK1YLR006C RSM22P36056 628 aa5.84□□□□□ -1.47
SSK1YLR006C YBR032WP38223 100 aa5.84□□□□□ -1.47
SSK1YLR006C LIN1P38852 340 aaPredicted RBP5.84□□□□□ -1.47
SSK1YLR006C CKB2P38930 258 aa5.84□□□□□ -1.47
SSK1YLR006C YDR089WP38966 869 aa5.84□□□□□ -1.47
SSK1YLR006C ALR2P43553 858 aa5.84□□□□□ -1.47
SSK1YLR006C YGR054WP53235 642 aaKnown RBP5.84□□□□□ -1.47
SSK1YLR006C KTR6P54070 446 aa5.84□□□□□ -1.47
SSK1YLR006C IVY1Q04934 453 aa5.84□□□□□ -1.47
SSK1YLR006C VID22Q05934 901 aa5.84□□□□□ -1.47
SSK1YLR006C YOR059CQ08448 450 aaKnown RBP5.84□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms