RNA–Protein interactions for RNA: YKL078W

DHR2, Transcript of Predominantly nucleolar DEAH-box ATP-dependent RNA helicase, yeast

Gene DHR2, Length 2,208 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DHR2	YKL078W	SPN1	Q06505	410 aa	Predicted RBP	4.19	□□□□□ -1.74
DHR2	YKL078W	TMA16	Q08687	178 aa		4.19	□□□□□ -1.74
DHR2	YKL078W	YPL216W	Q08964	1102 aa		4.19	□□□□□ -1.74
DHR2	YKL078W	BMS1	Q08965	1183 aa	Known RBP	4.19	□□□□□ -1.74
DHR2	YKL078W	NMD4	Q12129	218 aa		4.19	□□□□□ -1.74
DHR2	YKL078W	ALG7	P07286	448 aa		4.19	□□□□□ -1.74
DHR2	YKL078W	KGD2	P19262	463 aa	Predicted RBP	4.19	□□□□□ -1.74
DHR2	YKL078W	ELF1	P36053	145 aa		4.19	□□□□□ -1.74
DHR2	YKL078W	BUD16	P39988	312 aa		4.19	□□□□□ -1.74
DHR2	YKL078W	ATG4	P53867	494 aa		4.19	□□□□□ -1.74
DHR2	YKL078W	TIM10	P87108	93 aa		4.19	□□□□□ -1.74
DHR2	YKL078W	MFM1	Q02783	413 aa		4.19	□□□□□ -1.74
DHR2	YKL078W	SYF1	Q04048	859 aa	Predicted RBP	4.19	□□□□□ -1.74
DHR2	YKL078W	MFB1	Q04922	465 aa		4.19	□□□□□ -1.74
DHR2	YKL078W	PNO1	Q99216	274 aa	Known RBP	4.19	□□□□□ -1.74
DHR2	YKL078W	RAV1	P47104	1357 aa		4.19	□□□□□ -1.74
DHR2	YKL078W	PPR1	P07272	904 aa	Predicted RBP	4.18	□□□□□ -1.74
DHR2	YKL078W	CKA1	P15790	372 aa		4.18	□□□□□ -1.74
DHR2	YKL078W	ERG8	P24521	451 aa		4.18	□□□□□ -1.74
DHR2	YKL078W	CDC15	P27636	974 aa		4.18	□□□□□ -1.74
DHR2	YKL078W	PEX5	P35056	612 aa		4.18	□□□□□ -1.74
DHR2	YKL078W	NPR2	P39923	615 aa		4.18	□□□□□ -1.74
DHR2	YKL078W	PFK26	P40433	827 aa	Known RBP	4.18	□□□□□ -1.74
DHR2	YKL078W	RMD8	P43620	662 aa		4.18	□□□□□ -1.74
DHR2	YKL078W	ARE2	P53629	642 aa	Known RBP	4.18	□□□□□ -1.74
DHR2	YKL078W	BNI5	P53890	448 aa	Known RBP	4.18	□□□□□ -1.74
DHR2	YKL078W	TIM11	P81449	96 aa	Predicted RBP	4.18	□□□□□ -1.74
DHR2	YKL078W	CTF4	Q01454	927 aa		4.18	□□□□□ -1.74
DHR2	YKL078W	ERV41	Q04651	352 aa		4.18	□□□□□ -1.74
DHR2	YKL078W	RCN2	Q12044	265 aa		4.18	□□□□□ -1.74
DHR2	YKL078W	OCA4	P25366	362 aa		4.18	□□□□□ -1.74
DHR2	YKL078W	CDC5	P32562	705 aa		4.18	□□□□□ -1.74
DHR2	YKL078W	PXA2	P34230	853 aa		4.18	□□□□□ -1.74
DHR2	YKL078W	SLZ1	P40167	298 aa		4.18	□□□□□ -1.74
DHR2	YKL078W	SSL2	Q00578	843 aa		4.18	□□□□□ -1.74
DHR2	YKL078W	YPR172W	Q06608	200 aa		4.18	□□□□□ -1.74
DHR2	YKL078W	CTI6	Q08923	506 aa		4.18	□□□□□ -1.74
DHR2	YKL078W	USV1	Q12132	391 aa		4.18	□□□□□ -1.74
DHR2	YKL078W	RKI1	Q12189	258 aa		4.18	□□□□□ -1.74
DHR2	YKL078W	SNU66	Q12420	587 aa	Predicted RBP	4.18	□□□□□ -1.74
DHR2	YKL078W	YER175W-A	Q8TGU4	54 aa		4.18	□□□□□ -1.74
DHR2	YKL078W	HRR25	P29295	494 aa	Known RBP	4.17	□□□□□ -1.74
DHR2	YKL078W	FMP10	P40098	244 aa		4.17	□□□□□ -1.74
DHR2	YKL078W	DIP5	P53388	608 aa		4.17	□□□□□ -1.74
DHR2	YKL078W	SPC98	P53540	846 aa		4.17	□□□□□ -1.74
DHR2	YKL078W	VPS75	P53853	264 aa		4.17	□□□□□ -1.74
DHR2	YKL078W	RPS15	Q01855	142 aa	Known RBP	4.17	□□□□□ -1.74
DHR2	YKL078W	RPT6	Q01939	405 aa	Known RBP	4.17	□□□□□ -1.74
DHR2	YKL078W	VTC3	Q02725	835 aa		4.17	□□□□□ -1.74
DHR2	YKL078W	ENT4	Q07872	247 aa		4.17	□□□□□ -1.74
DHR2	YKL078W	YOR389W	Q08912	624 aa		4.17	□□□□□ -1.74
DHR2	YKL078W	RRG1	Q12167	365 aa	Predicted RBP	4.17	□□□□□ -1.74
DHR2	YKL078W	HSP42	Q12329	375 aa		4.17	□□□□□ -1.74
DHR2	YKL078W	TRM13	Q12383	476 aa		4.17	□□□□□ -1.74
DHR2	YKL078W	BCK1	Q01389	1478 aa		4.17	□□□□□ -1.74
DHR2	YKL078W	RED1	P14291	827 aa		4.17	□□□□□ -1.74
DHR2	YKL078W	CNE1	P27825	502 aa		4.17	□□□□□ -1.74
DHR2	YKL078W	GEX2	P36173	615 aa		4.17	□□□□□ -1.74
DHR2	YKL078W	YHR097C	P38809	366 aa	Known RBP	4.17	□□□□□ -1.74
DHR2	YKL078W	PSD1	P39006	500 aa		4.17	□□□□□ -1.74
DHR2	YKL078W	ARG2	P40360	574 aa		4.17	□□□□□ -1.74
DHR2	YKL078W	SNF12	P53628	566 aa		4.17	□□□□□ -1.74
DHR2	YKL078W	BUD17	P53727	317 aa		4.17	□□□□□ -1.74
DHR2	YKL078W	RAD30	Q04049	632 aa		4.17	□□□□□ -1.74
DHR2	YKL078W	UTP21	Q06078	939 aa	Predicted RBP	4.17	□□□□□ -1.74
DHR2	YKL078W	YDL073W	Q07454	984 aa		4.17	□□□□□ -1.74
DHR2	YKL078W	CRT10	Q08226	957 aa		4.17	□□□□□ -1.74
DHR2	YKL078W	KRE5	P22023	1365 aa		4.17	□□□□□ -1.74
DHR2	YKL078W	RTC1	Q08281	1341 aa		4.16	□□□□□ -1.74
DHR2	YKL078W	CLN1	P20437	546 aa		4.16	□□□□□ -1.74
DHR2	YKL078W	OPI1	P21957	404 aa		4.16	□□□□□ -1.74
DHR2	YKL078W	YCK1	P23291	538 aa		4.16	□□□□□ -1.74
DHR2	YKL078W	HCM1	P25364	564 aa		4.16	□□□□□ -1.74
DHR2	YKL078W	ACP1	P32463	125 aa		4.16	□□□□□ -1.74
DHR2	YKL078W	SRB5	P32585	307 aa		4.16	□□□□□ -1.74
DHR2	YKL078W	THI80	P35202	319 aa		4.16	□□□□□ -1.74
DHR2	YKL078W	ALY1	P36117	915 aa		4.16	□□□□□ -1.74
DHR2	YKL078W	MUM2	P38236	366 aa		4.16	□□□□□ -1.74
DHR2	YKL078W	TPA1	P40032	644 aa	Known RBP	4.16	□□□□□ -1.74
DHR2	YKL078W	MAM1	P40065	302 aa		4.16	□□□□□ -1.74
DHR2	YKL078W	RAD17	P48581	401 aa		4.16	□□□□□ -1.74
DHR2	YKL078W	YIP4	P53093	235 aa		4.16	□□□□□ -1.74
DHR2	YKL078W	DSL1	P53847	754 aa		4.16	□□□□□ -1.74
DHR2	YKL078W	SXM1	Q04175	944 aa	Known RBP	4.16	□□□□□ -1.74
DHR2	YKL078W	ARP9	Q05123	467 aa		4.16	□□□□□ -1.74
DHR2	YKL078W	LYS21	Q12122	440 aa	Known RBP	4.16	□□□□□ -1.74
DHR2	YKL078W	RUD3	Q12234	484 aa	Known RBP	4.16	□□□□□ -1.74
DHR2	YKL078W	CEX1	Q12453	761 aa		4.16	□□□□□ -1.74
DHR2	YKL078W	AAC1	P04710	309 aa		4.15	□□□□□ -1.74
DHR2	YKL078W	SUI3	P09064	285 aa	Known RBP	4.15	□□□□□ -1.74
DHR2	YKL078W	KTR3	P38130	404 aa	Predicted RBP	4.15	□□□□□ -1.74
DHR2	YKL078W	MED8	P38304	223 aa		4.15	□□□□□ -1.74
DHR2	YKL078W	PIH1	P38768	344 aa		4.15	□□□□□ -1.74
DHR2	YKL078W	LAS21	P40367	830 aa		4.15	□□□□□ -1.74
DHR2	YKL078W	JJJ1	P53863	590 aa		4.15	□□□□□ -1.74
DHR2	YKL078W	REX2	P54964	269 aa	Known RBP	4.15	□□□□□ -1.74
DHR2	YKL078W	SMD2	Q06217	110 aa	Known RBP	4.15	□□□□□ -1.74
DHR2	YKL078W	GRC3	Q07845	632 aa		4.15	□□□□□ -1.74
DHR2	YKL078W	BAG7	Q12128	409 aa		4.15	□□□□□ -1.74
DHR2	YKL078W	ARG3	P05150	338 aa		4.15	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 30.6 ms