RNA–Protein interactions for RNA: YJR060W

CBF1, Transcript of Basic helix-loop-helix (bHLH) protein, yeastyeast

Gene CBF1, Length 1,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF1YJR060W SHQ1P40486 507 aaPredicted RBP5.55□□□□□ -1.52
CBF1YJR060W VPS25P47142 202 aa5.55□□□□□ -1.52
CBF1YJR060W SLD3P53135 668 aa5.55□□□□□ -1.52
CBF1YJR060W PUS2P53167 370 aa5.55□□□□□ -1.52
CBF1YJR060W HOP2P53187 214 aa5.55□□□□□ -1.52
CBF1YJR060W DRN1P53255 507 aaKnown RBP5.55□□□□□ -1.52
CBF1YJR060W ERG5P54781 538 aa5.55□□□□□ -1.52
CBF1YJR060W NOP12Q08208 459 aaKnown RBP5.55□□□□□ -1.52
CBF1YJR060W GPM2Q12008 311 aa5.55□□□□□ -1.52
CBF1YJR060W YMR084WA2P2R3 262 aa5.54□□□□□ -1.52
CBF1YJR060W HMG2P12684 1045 aa5.54□□□□□ -1.52
CBF1YJR060W HEM12P32347 362 aaPredicted RBP5.54□□□□□ -1.52
CBF1YJR060W FRE1P32791 686 aa5.54□□□□□ -1.52
CBF1YJR060W TYE7P33122 291 aaPredicted RBP5.54□□□□□ -1.52
CBF1YJR060W STE13P33894 931 aa5.54□□□□□ -1.52
CBF1YJR060W PTH2P34222 208 aa5.54□□□□□ -1.52
CBF1YJR060W GCS1P35197 352 aa5.54□□□□□ -1.52
CBF1YJR060W PXL1P36166 706 aa5.54□□□□□ -1.52
CBF1YJR060W JNM1P36224 373 aa5.54□□□□□ -1.52
CBF1YJR060W RTT107P38850 1070 aa5.54□□□□□ -1.52
CBF1YJR060W YTA12P40341 825 aa5.54□□□□□ -1.52
CBF1YJR060W MOB1P40484 314 aa5.54□□□□□ -1.52
CBF1YJR060W YIR016WP40572 265 aa5.54□□□□□ -1.52
CBF1YJR060W IES1P43579 692 aa5.54□□□□□ -1.52
CBF1YJR060W PHO86P46956 311 aa5.54□□□□□ -1.52
CBF1YJR060W MND1P53102 219 aa5.54□□□□□ -1.52
CBF1YJR060W YGL036WP53185 909 aaPredicted RBP5.54□□□□□ -1.52
CBF1YJR060W YKR011CQ02209 353 aa5.54□□□□□ -1.52
CBF1YJR060W MUB1Q03162 620 aa5.54□□□□□ -1.52
CBF1YJR060W YHM2Q04013 314 aa5.54□□□□□ -1.52
CBF1YJR060W ARO80Q04052 950 aa5.54□□□□□ -1.52
CBF1YJR060W PRM6Q04705 352 aa5.54□□□□□ -1.52
CBF1YJR060W YLR224WQ05947 369 aa5.54□□□□□ -1.52
CBF1YJR060W MLC2Q06580 163 aa5.54□□□□□ -1.52
CBF1YJR060W YCG1Q06680 1035 aa5.54□□□□□ -1.52
CBF1YJR060W NBP2Q12163 236 aa5.54□□□□□ -1.52
CBF1YJR060W NKP1Q12493 238 aa5.54□□□□□ -1.52
CBF1YJR060W CCH1P50077 2039 aa5.53□□□□□ -1.52
CBF1YJR060W JIP3O13555 125 aa5.53□□□□□ -1.52
CBF1YJR060W PPR1P07272 904 aaPredicted RBP5.53□□□□□ -1.52
CBF1YJR060W TUP1P16649 713 aa5.53□□□□□ -1.52
CBF1YJR060W YKR051WP36142 418 aa5.53□□□□□ -1.52
CBF1YJR060W GUF1P46943 645 aa5.53□□□□□ -1.52
CBF1YJR060W PSP1P50896 841 aaKnown RBP5.53□□□□□ -1.52
CBF1YJR060W YGR111WP53265 400 aa5.53□□□□□ -1.52
CBF1YJR060W NSE5Q03718 556 aa5.53□□□□□ -1.52
CBF1YJR060W ATG9Q12142 997 aa5.53□□□□□ -1.52
CBF1YJR060W HRT3Q12347 344 aa5.53□□□□□ -1.52
CBF1YJR060W YDR034W-BQ6Q5X2 51 aa5.53□□□□□ -1.52
CBF1YJR060W MTF2P10849 440 aa5.52□□□□□ -1.53
CBF1YJR060W PDE1P22434 369 aa5.52□□□□□ -1.53
CBF1YJR060W LRE1P25579 583 aaKnown RBP5.52□□□□□ -1.53
CBF1YJR060W HXT6P39003 570 aaKnown RBP5.52□□□□□ -1.53
CBF1YJR060W HXT7P39004 570 aa5.52□□□□□ -1.53
CBF1YJR060W MPT5P39016 859 aaKnown RBP RIP-Chip data5.52□□□□□ -1.53not detected
CBF1YJR060W PLB1P39105 664 aa5.52□□□□□ -1.53
CBF1YJR060W SPC72P39723 622 aa5.52□□□□□ -1.53
CBF1YJR060W BTT1P40314 149 aaPredicted RBP5.52□□□□□ -1.53
CBF1YJR060W CHA4P43634 648 aa5.52□□□□□ -1.53
CBF1YJR060W ZAP1P47043 880 aa5.52□□□□□ -1.53
CBF1YJR060W ALF1P53904 254 aa5.52□□□□□ -1.53
CBF1YJR060W GPD1Q00055 391 aaKnown RBP5.52□□□□□ -1.53
CBF1YJR060W CLU1Q03690 1277 aaKnown RBP5.52□□□□□ -1.53
CBF1YJR060W YMR018WQ04364 514 aa5.52□□□□□ -1.53
CBF1YJR060W VPS38Q05919 439 aa5.52□□□□□ -1.53
CBF1YJR060W TMA10Q06177 86 aa5.52□□□□□ -1.53
CBF1YJR060W PEX15Q08215 383 aa5.52□□□□□ -1.53
CBF1YJR060W CIR2Q08822 631 aa5.52□□□□□ -1.53
CBF1YJR060W DAP1Q12091 152 aa5.52□□□□□ -1.53
CBF1YJR060W RPS21AP0C0V8 87 aaKnown RBP5.51□□□□□ -1.53
CBF1YJR060W APE1P14904 514 aa5.51□□□□□ -1.53
CBF1YJR060W MTF1P14908 341 aaKnown RBP5.51□□□□□ -1.53
CBF1YJR060W SPO12P17123 173 aa5.51□□□□□ -1.53
CBF1YJR060W PEX1P24004 1043 aa5.51□□□□□ -1.53
CBF1YJR060W SEC1P30619 724 aaKnown RBP5.51□□□□□ -1.53
CBF1YJR060W RPD3P32561 433 aa5.51□□□□□ -1.53
CBF1YJR060W DSS4P32601 143 aa5.51□□□□□ -1.53
CBF1YJR060W MRP4P32902 394 aa5.51□□□□□ -1.53
CBF1YJR060W LST4P34239 828 aa5.51□□□□□ -1.53
CBF1YJR060W YKL050CP35736 922 aa5.51□□□□□ -1.53
CBF1YJR060W SFB3P38810 929 aa5.51□□□□□ -1.53
CBF1YJR060W YHR131CP38835 850 aa5.51□□□□□ -1.53
CBF1YJR060W HIS6P40545 261 aa5.51□□□□□ -1.53
CBF1YJR060W MAF1P41910 395 aa5.51□□□□□ -1.53
CBF1YJR060W BNA2P47125 453 aa5.51□□□□□ -1.53
CBF1YJR060W SLG1P54867 378 aa5.51□□□□□ -1.53
CBF1YJR060W LEE1Q02799 301 aaKnown RBP5.51□□□□□ -1.53
CBF1YJR060W DAS2Q12084 232 aa5.51□□□□□ -1.53
CBF1YJR060W RPS21BQ3E754 87 aaKnown RBP5.51□□□□□ -1.53
CBF1YJR060W Q0142Q9ZZW4 58 aa5.51□□□□□ -1.53
CBF1YJR060W FAB1P34756 2278 aa5.5□□□□□ -1.53
CBF1YJR060W GFA1P14742 717 aaKnown RBP5.5□□□□□ -1.53
CBF1YJR060W PUT4P15380 627 aa5.5□□□□□ -1.53
CBF1YJR060W RAD16P31244 790 aa5.5□□□□□ -1.53
CBF1YJR060W CBR1P38626 284 aaKnown RBP5.5□□□□□ -1.53
CBF1YJR060W RPT2P40327 437 aaKnown RBP5.5□□□□□ -1.53
CBF1YJR060W YIL108WP40483 696 aaKnown RBP5.5□□□□□ -1.53
CBF1YJR060W RNR4P49723 345 aaKnown RBP5.5□□□□□ -1.53
CBF1YJR060W CEG1Q01159 459 aaPredicted RBP5.5□□□□□ -1.53
CBF1YJR060W MTD1Q02046 320 aaKnown RBP5.5□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms