RNA–Protein interactions for RNA: YIL148W

RPL40A, Transcript of Ubiquitin-ribosomal 60S subunit protein L40A fusion protein, yeastyeast

Gene RPL40A, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40AYIL148W NOP16P40007 231 aaKnown RBP2.53□□□□□ -2
RPL40AYIL148W SLZ1P40167 298 aa2.53□□□□□ -2
RPL40AYIL148W IME4P41833 600 aa2.53□□□□□ -2
RPL40AYIL148W STB2P46679 850 aa2.53□□□□□ -2
RPL40AYIL148W NET1P47035 1189 aa2.53□□□□□ -2
RPL40AYIL148W MSY1P48527 492 aa2.53□□□□□ -2
RPL40AYIL148W ORC5P50874 479 aa2.53□□□□□ -2
RPL40AYIL148W IST1P53843 298 aaPredicted RBP2.53□□□□□ -2
RPL40AYIL148W MPS1P54199 764 aa2.53□□□□□ -2
RPL40AYIL148W SNU56Q03782 492 aaKnown RBP2.53□□□□□ -2
RPL40AYIL148W ARP9Q05123 467 aa2.53□□□□□ -2
RPL40AYIL148W HRD3Q05787 833 aa2.53□□□□□ -2
RPL40AYIL148W SKG3Q06315 1026 aa2.53□□□□□ -2
RPL40AYIL148W THI3Q07471 609 aa2.53□□□□□ -2
RPL40AYIL148W PSR1Q07800 427 aa2.53□□□□□ -2
RPL40AYIL148W CIR2Q08822 631 aa2.53□□□□□ -2
RPL40AYIL148W PRS5Q12265 496 aaKnown RBP2.53□□□□□ -2
RPL40AYIL148W YBR126W-AQ8TGU7 68 aa2.53□□□□□ -2
RPL40AYIL148W YOR019WQ99248 730 aa2.53□□□□□ -2
RPL40AYIL148W VCX1Q99385 411 aa2.53□□□□□ -2
RPL40AYIL148W RPB2P08518 1224 aaKnown RBP2.52□□□□□ -2.01
RPL40AYIL148W AAC3P18238 307 aa2.52□□□□□ -2.01
RPL40AYIL148W NUP1P20676 1076 aa2.52□□□□□ -2.01
RPL40AYIL148W SAN1P22470 610 aa2.52□□□□□ -2.01
RPL40AYIL148W GSY2P27472 705 aa2.52□□□□□ -2.01
RPL40AYIL148W NOC2P39744 710 aaKnown RBP2.52□□□□□ -2.01
RPL40AYIL148W DPH1P40487 425 aaKnown RBP2.52□□□□□ -2.01
RPL40AYIL148W SNO3P43544 222 aa2.52□□□□□ -2.01
RPL40AYIL148W RMD8P43620 662 aa2.52□□□□□ -2.01
RPL40AYIL148W NNF2P53253 936 aa2.52□□□□□ -2.01
RPL40AYIL148W RPT6Q01939 405 aaKnown RBP2.52□□□□□ -2.01
RPL40AYIL148W SVL3Q03088 825 aaKnown RBP2.52□□□□□ -2.01
RPL40AYIL148W RSM28Q03430 361 aa2.52□□□□□ -2.01
RPL40AYIL148W RAD30Q04049 632 aa2.52□□□□□ -2.01
RPL40AYIL148W TFC6Q06339 672 aa2.52□□□□□ -2.01
RPL40AYIL148W BSP1Q06604 576 aa2.52□□□□□ -2.01
RPL40AYIL148W RRI2Q12348 645 aa2.52□□□□□ -2.01
RPL40AYIL148W RAP1P11938 827 aa2.51□□□□□ -2.01
RPL40AYIL148W MRP7P12687 371 aa2.51□□□□□ -2.01
RPL40AYIL148W HSC82P15108 705 aaKnown RBP2.51□□□□□ -2.01
RPL40AYIL148W YCR006CP25350 157 aa2.51□□□□□ -2.01
RPL40AYIL148W YJU2P28320 278 aaPredicted RBP2.51□□□□□ -2.01
RPL40AYIL148W SAC6P32599 642 aaKnown RBP2.51□□□□□ -2.01
RPL40AYIL148W NTR2P36118 322 aaPredicted RBP2.51□□□□□ -2.01
RPL40AYIL148W ESL2P36168 1195 aa2.51□□□□□ -2.01
RPL40AYIL148W AAP1P37898 856 aaKnown RBP2.51□□□□□ -2.01
RPL40AYIL148W SEC31P38968 1273 aaKnown RBP2.51□□□□□ -2.01
RPL40AYIL148W BUR6P40096 142 aa2.51□□□□□ -2.01
RPL40AYIL148W XBP1P40489 647 aa2.51□□□□□ -2.01
RPL40AYIL148W IRC7P43623 340 aa2.51□□□□□ -2.01
RPL40AYIL148W SAE2P46946 345 aa2.51□□□□□ -2.01
RPL40AYIL148W AAD10P47182 288 aa2.51□□□□□ -2.01
RPL40AYIL148W UBP8P50102 471 aa2.51□□□□□ -2.01
RPL40AYIL148W ZDS2P54786 942 aa2.51□□□□□ -2.01
RPL40AYIL148W ERG13P54839 491 aaKnown RBP2.51□□□□□ -2.01
RPL40AYIL148W PFA5Q03289 374 aa2.51□□□□□ -2.01
RPL40AYIL148W BUD22Q04347 519 aaKnown RBP2.51□□□□□ -2.01
RPL40AYIL148W SPN1Q06505 410 aaPredicted RBP2.51□□□□□ -2.01
RPL40AYIL148W ENT4Q07872 247 aa2.51□□□□□ -2.01
RPL40AYIL148W PSK2Q08217 1101 aa2.51□□□□□ -2.01
RPL40AYIL148W APL4Q12028 832 aa2.51□□□□□ -2.01
RPL40AYIL148W NOP58Q12499 511 aaKnown RBP2.51□□□□□ -2.01
RPL40AYIL148W CET1O13297 549 aaPredicted RBP2.5□□□□□ -2.01
RPL40AYIL148W SEM1O94742 89 aa2.5□□□□□ -2.01
RPL40AYIL148W IMP2'P32351 346 aa2.5□□□□□ -2.01
RPL40AYIL148W GSH1P32477 678 aa2.5□□□□□ -2.01
RPL40AYIL148W YKL050CP35736 922 aa2.5□□□□□ -2.01
RPL40AYIL148W ADE17P38009 592 aaKnown RBP2.5□□□□□ -2.01
RPL40AYIL148W SCO2P38072 301 aa2.5□□□□□ -2.01
RPL40AYIL148W MAL33P38157 468 aa2.5□□□□□ -2.01
RPL40AYIL148W PSD1P39006 500 aa2.5□□□□□ -2.01
RPL40AYIL148W PHM8P40025 321 aa2.5□□□□□ -2.01
RPL40AYIL148W LTP1P40347 161 aa2.5□□□□□ -2.01
RPL40AYIL148W ARF3P40994 183 aaRIP-Chip data2.5□□□□□ -2.01not detected
RPL40AYIL148W SIP4P46954 829 aa2.5□□□□□ -2.01
RPL40AYIL148W DPB11P47027 764 aaPredicted RBP2.5□□□□□ -2.01
RPL40AYIL148W SMC3P47037 1230 aa2.5□□□□□ -2.01
RPL40AYIL148W DIA3P52290 468 aa2.5□□□□□ -2.01
RPL40AYIL148W RBG2P53295 368 aaKnown RBP2.5□□□□□ -2.01
RPL40AYIL148W YNL144CP53907 740 aa2.5□□□□□ -2.01
RPL40AYIL148W MDM1Q01846 1127 aa2.5□□□□□ -2.01
RPL40AYIL148W RIX7Q07844 837 aaKnown RBP2.5□□□□□ -2.01
RPL40AYIL148W RCN2Q12044 265 aa2.5□□□□□ -2.01
RPL40AYIL148W RTP1Q12751 981 aa2.5□□□□□ -2.01
RPL40AYIL148W GCN4P03069 281 aa2.49□□□□□ -2.01
RPL40AYIL148W YCK1P23291 538 aa2.49□□□□□ -2.01
RPL40AYIL148W LCB1P25045 558 aaKnown RBP2.49□□□□□ -2.01
RPL40AYIL148W AUR1P36107 401 aaPredicted RBP2.49□□□□□ -2.01
RPL40AYIL148W UBP13P38187 747 aa2.49□□□□□ -2.01
RPL40AYIL148W REG2P38232 338 aa2.49□□□□□ -2.01
RPL40AYIL148W ECM10P39987 644 aa2.49□□□□□ -2.01
RPL40AYIL148W JHD1P40034 492 aa2.49□□□□□ -2.01
RPL40AYIL148W VRG4P40107 337 aa2.49□□□□□ -2.01
RPL40AYIL148W SEC24P40482 926 aaKnown RBP2.49□□□□□ -2.01
RPL40AYIL148W PTR3P43606 678 aa2.49□□□□□ -2.01
RPL40AYIL148W CTK2P46962 323 aa2.49□□□□□ -2.01
RPL40AYIL148W DUO1P53168 247 aaKnown RBP2.49□□□□□ -2.01
RPL40AYIL148W YGR127WP53275 312 aa2.49□□□□□ -2.01
RPL40AYIL148W YSA1Q01976 231 aa2.49□□□□□ -2.01
RPL40AYIL148W SPC19Q03954 165 aa2.49□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms