RNA–Protein interactions for RNA: YGR135W

PRE9, Transcript of Alpha 3 subunit of the 20S proteasome, yeastyeast

Gene PRE9, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE9YGR135W MFM1Q02783 413 aa4.46□□□□□ -1.7
PRE9YGR135W MSC2Q03455 724 aa4.46□□□□□ -1.7
PRE9YGR135W TAF11Q04226 346 aa4.46□□□□□ -1.7
PRE9YGR135W TAF9Q05027 157 aa4.46□□□□□ -1.7
PRE9YGR135W YAP7Q08182 245 aa4.46□□□□□ -1.7
PRE9YGR135W APL5Q08951 932 aaKnown RBP4.46□□□□□ -1.7
PRE9YGR135W TAF10Q12030 206 aa4.46□□□□□ -1.7
PRE9YGR135W NBL1Q3E7Y6 73 aa4.46□□□□□ -1.7
PRE9YGR135W URA3P03962 267 aa4.45□□□□□ -1.7
PRE9YGR135W TPK1P06244 397 aa4.45□□□□□ -1.7
PRE9YGR135W TUP1P16649 713 aa4.45□□□□□ -1.7
PRE9YGR135W PRP4P20053 465 aaKnown RBP4.45□□□□□ -1.7
PRE9YGR135W DBF4P32325 704 aa4.45□□□□□ -1.7
PRE9YGR135W NIP1P32497 812 aaKnown RBP4.45□□□□□ -1.7
PRE9YGR135W VPH1P32563 840 aaKnown RBP4.45□□□□□ -1.7
PRE9YGR135W YBR062CP38239 180 aa4.45□□□□□ -1.7
PRE9YGR135W RTS1P38903 757 aa4.45□□□□□ -1.7
PRE9YGR135W CCT3P39077 534 aaKnown RBP4.45□□□□□ -1.7
PRE9YGR135W SDP1P40479 209 aa4.45□□□□□ -1.7
PRE9YGR135W CAB2P40506 365 aa4.45□□□□□ -1.7
PRE9YGR135W AXL1P40851 1208 aa4.45□□□□□ -1.7
PRE9YGR135W IRC6P43615 237 aa4.45□□□□□ -1.7
PRE9YGR135W IRC8P47046 822 aa4.45□□□□□ -1.7
PRE9YGR135W BSC5P53755 489 aa4.45□□□□□ -1.7
PRE9YGR135W BET4Q00618 327 aa4.45□□□□□ -1.7
PRE9YGR135W USA1Q03714 838 aa4.45□□□□□ -1.7
PRE9YGR135W NSE5Q03718 556 aa4.45□□□□□ -1.7
PRE9YGR135W PPN1Q04119 674 aa4.45□□□□□ -1.7
PRE9YGR135W TRI1Q05024 226 aa4.45□□□□□ -1.7
PRE9YGR135W ORM2Q06144 216 aa4.45□□□□□ -1.7
PRE9YGR135W AAD4Q07747 329 aa4.45□□□□□ -1.7
PRE9YGR135W OSW1Q08692 278 aa4.45□□□□□ -1.7
PRE9YGR135W VTS1Q08831 523 aaKnown RBP RIP-Chip data4.45□□□□□ -1.7not detected
PRE9YGR135W HUA2Q12134 243 aa4.45□□□□□ -1.7
PRE9YGR135W RIO1Q12196 484 aaKnown RBP4.45□□□□□ -1.7
PRE9YGR135W COX17Q12287 69 aa4.45□□□□□ -1.7
PRE9YGR135W RIB2Q12362 591 aaKnown RBP4.45□□□□□ -1.7
PRE9YGR135W ZRT2Q12436 422 aa4.45□□□□□ -1.7
PRE9YGR135W POM152P39685 1337 aa4.45□□□□□ -1.7
PRE9YGR135W FBP1P09201 348 aa4.44□□□□□ -1.7
PRE9YGR135W ERG11P10614 530 aa4.44□□□□□ -1.7
PRE9YGR135W KAR3P17119 729 aa4.44□□□□□ -1.7
PRE9YGR135W CWH43P25618 953 aa4.44□□□□□ -1.7
PRE9YGR135W CTS1P29029 562 aa4.44□□□□□ -1.7
PRE9YGR135W MTH1P35198 433 aa4.44□□□□□ -1.7
PRE9YGR135W APT2P36973 181 aa4.44□□□□□ -1.7
PRE9YGR135W PIH1P38768 344 aa4.44□□□□□ -1.7
PRE9YGR135W CTF8P38877 133 aa4.44□□□□□ -1.7
PRE9YGR135W SMC2P38989 1170 aaKnown RBP4.44□□□□□ -1.7
PRE9YGR135W TPA1P40032 644 aaKnown RBP4.44□□□□□ -1.7
PRE9YGR135W ARF3P40994 183 aaRIP-Chip data4.44□□□□□ -1.7not detected
PRE9YGR135W BUD8P41698 603 aa4.44□□□□□ -1.7
PRE9YGR135W PFA3P42836 336 aa4.44□□□□□ -1.7
PRE9YGR135W RTC4P53850 401 aa4.44□□□□□ -1.7
PRE9YGR135W RPS15Q01855 142 aaKnown RBP4.44□□□□□ -1.7
PRE9YGR135W RCR2Q03446 210 aaKnown RBP4.44□□□□□ -1.7
PRE9YGR135W ROT1Q03691 256 aa4.44□□□□□ -1.7
PRE9YGR135W ARO80Q04052 950 aa4.44□□□□□ -1.7
PRE9YGR135W MUS81Q04149 632 aaPredicted RBP4.44□□□□□ -1.7
PRE9YGR135W VBA4Q04602 768 aaKnown RBP4.44□□□□□ -1.7
PRE9YGR135W FAR8Q05040 523 aa4.44□□□□□ -1.7
PRE9YGR135W ECI1Q05871 280 aa4.44□□□□□ -1.7
PRE9YGR135W MLH2Q07980 695 aa4.44□□□□□ -1.7
PRE9YGR135W NCA2Q12374 616 aa4.44□□□□□ -1.7
PRE9YGR135W CEX1Q12453 761 aa4.44□□□□□ -1.7
PRE9YGR135W YOR111WQ99210 232 aa4.44□□□□□ -1.7
PRE9YGR135W YLR302CO13544 120 aa4.43□□□□□ -1.7
PRE9YGR135W GAL10P04397 699 aa4.43□□□□□ -1.7
PRE9YGR135W SPE1P08432 466 aa4.43□□□□□ -1.7
PRE9YGR135W YMR085WP0CF18 432 aa4.43□□□□□ -1.7
PRE9YGR135W CKA1P15790 372 aa4.43□□□□□ -1.7
PRE9YGR135W SGF29P25554 259 aa4.43□□□□□ -1.7
PRE9YGR135W MVD1P32377 396 aaKnown RBP4.43□□□□□ -1.7
PRE9YGR135W ARP2P32381 391 aaKnown RBP4.43□□□□□ -1.7
PRE9YGR135W ANP1P32629 500 aa4.43□□□□□ -1.7
PRE9YGR135W UBC6P33296 250 aaPredicted RBP4.43□□□□□ -1.7
PRE9YGR135W RMA1P36001 430 aaKnown RBP4.43□□□□□ -1.7
PRE9YGR135W FZO1P38297 855 aa4.43□□□□□ -1.7
PRE9YGR135W YBR225WP38321 900 aa4.43□□□□□ -1.7
PRE9YGR135W LIN1P38852 340 aaPredicted RBP4.43□□□□□ -1.7
PRE9YGR135W YNL195CP40168 261 aa4.43□□□□□ -1.7
PRE9YGR135W SMX2P40204 77 aaKnown RBP4.43□□□□□ -1.7
PRE9YGR135W YJR061WP40355 935 aa4.43□□□□□ -1.7
PRE9YGR135W CSM2P40465 213 aa4.43□□□□□ -1.7
PRE9YGR135W IAH1P41734 238 aa4.43□□□□□ -1.7
PRE9YGR135W TDA10P42938 290 aa4.43□□□□□ -1.7
PRE9YGR135W URB2P47108 1174 aa4.43□□□□□ -1.7
PRE9YGR135W TAH11P47112 604 aa4.43□□□□□ -1.7
PRE9YGR135W PSP1P50896 841 aaKnown RBP4.43□□□□□ -1.7
PRE9YGR135W PEF1P53238 335 aa4.43□□□□□ -1.7
PRE9YGR135W YPL071CQ02864 156 aa4.43□□□□□ -1.7
PRE9YGR135W ATG21Q02887 496 aa4.43□□□□□ -1.7
PRE9YGR135W DIG1Q03063 452 aaKnown RBP4.43□□□□□ -1.7
PRE9YGR135W PRP42Q03776 544 aaKnown RBP4.43□□□□□ -1.7
PRE9YGR135W INP2Q03824 705 aa4.43□□□□□ -1.7
PRE9YGR135W SIZ1Q04195 904 aa4.43□□□□□ -1.7
PRE9YGR135W DUS4Q06063 367 aa4.43□□□□□ -1.7
PRE9YGR135W UTP21Q06078 939 aaPredicted RBP4.43□□□□□ -1.7
PRE9YGR135W VPS36Q06696 566 aa4.43□□□□□ -1.7
PRE9YGR135W CRD1Q07560 283 aa4.43□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms