RNA–Protein interactions for RNA: YGR116W

SPT6, Transcript of Nucleosome remodeling protein, yeastyeast

Gene SPT6, Length 4,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT6YGR116W PDE2P06776 526 aa3.69□□□□□ -1.82
SPT6YGR116W HMG1P12683 1054 aa3.69□□□□□ -1.82
SPT6YGR116W KGD1P20967 1014 aaKnown RBP3.69□□□□□ -1.82
SPT6YGR116W PHO3P24031 467 aa3.69□□□□□ -1.82
SPT6YGR116W UTP30P36144 274 aaKnown RBP3.69□□□□□ -1.82
SPT6YGR116W IFA38P38286 347 aa3.69□□□□□ -1.82
SPT6YGR116W YJL045WP47052 634 aa3.69□□□□□ -1.82
SPT6YGR116W TAH11P47112 604 aa3.69□□□□□ -1.82
SPT6YGR116W EFM3P47163 339 aa3.69□□□□□ -1.82
SPT6YGR116W ARO8P53090 500 aaKnown RBP3.69□□□□□ -1.82
SPT6YGR116W TWF1P53250 332 aa3.69□□□□□ -1.82
SPT6YGR116W ARK1P53974 638 aa3.69□□□□□ -1.82
SPT6YGR116W CDC55Q00362 526 aa3.69□□□□□ -1.82
SPT6YGR116W MUK1Q02866 612 aa3.69□□□□□ -1.82
SPT6YGR116W SLD5Q03406 294 aa3.69□□□□□ -1.82
SPT6YGR116W PEX12Q04370 399 aa3.69□□□□□ -1.82
SPT6YGR116W DTD1Q07648 150 aaKnown RBP3.69□□□□□ -1.82
SPT6YGR116W FMP25Q08023 583 aa3.69□□□□□ -1.82
SPT6YGR116W NGL1Q08213 363 aaKnown RBP3.69□□□□□ -1.82
SPT6YGR116W TRE2Q08693 809 aa3.69□□□□□ -1.82
SPT6YGR116W SAM3Q08986 587 aa3.69□□□□□ -1.82
SPT6YGR116W CCP1P00431 361 aa3.69□□□□□ -1.82
SPT6YGR116W ASF2P32448 525 aaPredicted RBP3.69□□□□□ -1.82
SPT6YGR116W COT1P32798 439 aa3.69□□□□□ -1.82
SPT6YGR116W NIC96P34077 839 aa3.69□□□□□ -1.82
SPT6YGR116W EAP1P36041 632 aaKnown RBP3.69□□□□□ -1.82
SPT6YGR116W NOP4P37838 685 aaKnown RBP3.69□□□□□ -1.82
SPT6YGR116W ECM10P39987 644 aa3.69□□□□□ -1.82
SPT6YGR116W MND2P40577 368 aa3.69□□□□□ -1.82
SPT6YGR116W IML2P47031 731 aa3.69□□□□□ -1.82
SPT6YGR116W VTC4P47075 721 aa3.69□□□□□ -1.82
SPT6YGR116W IMA1P53051 589 aa3.69□□□□□ -1.82
SPT6YGR116W MON1P53129 644 aa3.69□□□□□ -1.82
SPT6YGR116W RAX1Q08760 435 aa3.69□□□□□ -1.82
SPT6YGR116W SMF3Q12078 473 aaPredicted RBP3.69□□□□□ -1.82
SPT6YGR116W CMR1Q12510 522 aaKnown RBP3.69□□□□□ -1.82
SPT6YGR116W PCD1Q12524 340 aa3.69□□□□□ -1.82
SPT6YGR116W ATP6P00854 259 aa3.69□□□□□ -1.82
SPT6YGR116W SIT4P20604 311 aa3.69□□□□□ -1.82
SPT6YGR116W SAR1P20606 190 aaKnown RBP3.69□□□□□ -1.82
SPT6YGR116W PTC6P25646 442 aa3.69□□□□□ -1.82
SPT6YGR116W ACH1P32316 526 aa3.69□□□□□ -1.82
SPT6YGR116W HXT3P32466 567 aaKnown RBP3.69□□□□□ -1.82
SPT6YGR116W ARA1P38115 344 aa3.69□□□□□ -1.82
SPT6YGR116W DDI1P40087 428 aa3.69□□□□□ -1.82
SPT6YGR116W IMA5P40884 581 aa3.69□□□□□ -1.82
SPT6YGR116W MET12P46151 657 aa3.69□□□□□ -1.82
SPT6YGR116W MTR3P48240 250 aaPredicted RBP3.69□□□□□ -1.82
SPT6YGR116W RAI1P53063 387 aaKnown RBP3.69□□□□□ -1.82
SPT6YGR116W TAM41P53230 385 aa3.69□□□□□ -1.82
SPT6YGR116W IPI3P53877 555 aa3.69□□□□□ -1.82
SPT6YGR116W SLM2P53955 656 aa3.69□□□□□ -1.82
SPT6YGR116W RKM2Q03942 479 aa3.69□□□□□ -1.82
SPT6YGR116W TPO1Q07824 586 aa3.69□□□□□ -1.82
SPT6YGR116W APC9Q12107 265 aa3.69□□□□□ -1.82
SPT6YGR116W YRR1Q12172 810 aa3.69□□□□□ -1.82
SPT6YGR116W ATG31Q12421 196 aa3.69□□□□□ -1.82
SPT6YGR116W MHF1Q3E835 90 aa3.69□□□□□ -1.82
SPT6YGR116W TPK1P06244 397 aa3.68□□□□□ -1.82
SPT6YGR116W WHI2P12611 486 aa3.68□□□□□ -1.82
SPT6YGR116W YAP1P19880 650 aaKnown RBP3.68□□□□□ -1.82
SPT6YGR116W VPS33P20795 691 aa3.68□□□□□ -1.82
SPT6YGR116W CCA1P21269 546 aa3.68□□□□□ -1.82
SPT6YGR116W CLG1P35190 452 aa3.68□□□□□ -1.82
SPT6YGR116W RBG1P39729 369 aa3.68□□□□□ -1.82
SPT6YGR116W ECL1P48235 211 aa3.68□□□□□ -1.82
SPT6YGR116W DIE2P50076 525 aa3.68□□□□□ -1.82
SPT6YGR116W CWC23P52868 283 aaPredicted RBP3.68□□□□□ -1.82
SPT6YGR116W YPL107WQ02873 248 aa3.68□□□□□ -1.82
SPT6YGR116W YDR090CQ03193 310 aa3.68□□□□□ -1.82
SPT6YGR116W SPH1Q06160 661 aa3.68□□□□□ -1.82
SPT6YGR116W CRD1Q07560 283 aa3.68□□□□□ -1.82
SPT6YGR116W AIM39Q08223 395 aa3.68□□□□□ -1.82
SPT6YGR116W GIS3Q12418 502 aa3.68□□□□□ -1.82
SPT6YGR116W YOL159C-AQ3E769 90 aa3.68□□□□□ -1.82
SPT6YGR116W YEL077CQ3E7X8 1277 aa3.68□□□□□ -1.82
SPT6YGR116W ECM3Q99252 613 aa3.68□□□□□ -1.82
SPT6YGR116W SAS5Q99314 248 aa3.68□□□□□ -1.82
SPT6YGR116W PET494P07390 489 aaPredicted RBP3.68□□□□□ -1.82
SPT6YGR116W NFT1P0CE68 1218 aa3.68□□□□□ -1.82
SPT6YGR116W CAP2P13517 287 aa3.68□□□□□ -1.82
SPT6YGR116W UBC8P28263 218 aa3.68□□□□□ -1.82
SPT6YGR116W TMT1P32643 299 aa3.68□□□□□ -1.82
SPT6YGR116W UGA4P32837 571 aa3.68□□□□□ -1.82
SPT6YGR116W RGT1P32862 1170 aa3.68□□□□□ -1.82
SPT6YGR116W TYE7P33122 291 aaPredicted RBP3.68□□□□□ -1.82
SPT6YGR116W YBL028CP38202 106 aa3.68□□□□□ -1.82
SPT6YGR116W YJR061WP40355 935 aa3.68□□□□□ -1.82
SPT6YGR116W YIL054WP40524 105 aa3.68□□□□□ -1.82
SPT6YGR116W GSM1P42950 618 aa3.68□□□□□ -1.82
SPT6YGR116W FET5P43561 622 aa3.68□□□□□ -1.82
SPT6YGR116W LIF1P53150 421 aa3.68□□□□□ -1.82
SPT6YGR116W YPR003CP53394 754 aa3.68□□□□□ -1.82
SPT6YGR116W DID2P69771 204 aa3.68□□□□□ -1.82
SPT6YGR116W MRPL13Q02204 264 aa3.68□□□□□ -1.82
SPT6YGR116W RSC2Q06488 889 aa3.68□□□□□ -1.82
SPT6YGR116W VPS36Q06696 566 aa3.68□□□□□ -1.82
SPT6YGR116W LAP2Q10740 671 aa3.68□□□□□ -1.82
SPT6YGR116W COX6P00427 148 aa3.68□□□□□ -1.82
SPT6YGR116W TOP3P13099 656 aa3.68□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms