RNA–Protein interactions for RNA: YGR013W

SNU71, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU71, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU71YGR013W HOF1Q05080 669 aa6.83□□□□□ -1.32
SNU71YGR013W RGC1Q06108 1083 aaKnown RBP6.83□□□□□ -1.32
SNU71YGR013W YLL032CQ07834 825 aaKnown RBP RIP-Chip data6.83□□□□□ -1.32not detected
SNU71YGR013W DIA2Q08496 732 aaPredicted RBP6.83□□□□□ -1.32
SNU71YGR013W PEX1P24004 1043 aa6.82□□□□□ -1.32
SNU71YGR013W YCR015CP25616 317 aa6.82□□□□□ -1.32
SNU71YGR013W URK1P27515 501 aa6.82□□□□□ -1.32
SNU71YGR013W UIP5P36137 443 aa6.82□□□□□ -1.32
SNU71YGR013W CST26P38226 397 aa6.82□□□□□ -1.32
SNU71YGR013W YJL193WP39542 402 aa6.82□□□□□ -1.32
SNU71YGR013W YIL077CP40508 320 aa6.82□□□□□ -1.32
SNU71YGR013W FYV8P46949 817 aaKnown RBP6.82□□□□□ -1.32
SNU71YGR013W IDS2P46958 469 aa6.82□□□□□ -1.32
SNU71YGR013W YFT2Q06676 274 aa6.82□□□□□ -1.32
SNU71YGR013W SPE3Q12074 293 aaKnown RBP6.82□□□□□ -1.32
SNU71YGR013W YPT6Q99260 215 aa6.82□□□□□ -1.32
SNU71YGR013W REC107P21651 314 aa6.81□□□□□ -1.32
SNU71YGR013W ERV1P27882 189 aa6.81□□□□□ -1.32
SNU71YGR013W SMI1P32566 505 aa6.81□□□□□ -1.32
SNU71YGR013W RPP1P38786 293 aa6.81□□□□□ -1.32
SNU71YGR013W CCT6P39079 546 aa6.81□□□□□ -1.32
SNU71YGR013W MTL1P53214 551 aa6.81□□□□□ -1.32
SNU71YGR013W GTF1P53260 183 aaPredicted RBP6.81□□□□□ -1.32
SNU71YGR013W NRG1Q03125 231 aa6.81□□□□□ -1.32
SNU71YGR013W MTG1Q03151 367 aaPredicted RBP6.81□□□□□ -1.32
SNU71YGR013W BUD7Q08754 746 aa6.81□□□□□ -1.32
SNU71YGR013W DFR1P07807 211 aaKnown RBP RIP-Chip data6.81□□□□□ -1.32not detected
SNU71YGR013W GND1P38720 489 aaKnown RBP6.81□□□□□ -1.32
SNU71YGR013W TMN3P40071 706 aa6.81□□□□□ -1.32
SNU71YGR013W YIL161WP40449 235 aaKnown RBP6.81□□□□□ -1.32
SNU71YGR013W IME4P41833 600 aa6.81□□□□□ -1.32
SNU71YGR013W YNR014WP53719 212 aa6.81□□□□□ -1.32
SNU71YGR013W EOS1P53938 366 aa6.81□□□□□ -1.32
SNU71YGR013W YML037CQ03703 340 aa6.81□□□□□ -1.32
SNU71YGR013W ROY1Q04847 553 aa6.81□□□□□ -1.32
SNU71YGR013W FEN2P25621 512 aaKnown RBP6.8□□□□□ -1.32
SNU71YGR013W DSS4P32601 143 aa6.8□□□□□ -1.32
SNU71YGR013W YHR218WP38899 603 aa6.8□□□□□ -1.32
SNU71YGR013W YGL036WP53185 909 aaPredicted RBP6.8□□□□□ -1.32
SNU71YGR013W CUL3P53202 744 aa6.8□□□□□ -1.32
SNU71YGR013W YGR066CP53242 292 aa6.8□□□□□ -1.32
SNU71YGR013W TOF1P53840 1238 aa6.8□□□□□ -1.32
SNU71YGR013W GTB1Q04924 702 aa6.8□□□□□ -1.32
SNU71YGR013W PEX19Q07418 342 aa6.8□□□□□ -1.32
SNU71YGR013W TCO89Q08921 799 aa6.8□□□□□ -1.32
SNU71YGR013W YPL272CQ08984 517 aa6.8□□□□□ -1.32
SNU71YGR013W AFI1Q99222 893 aa6.8□□□□□ -1.32
SNU71YGR013W CPR2P23285 205 aa6.79□□□□□ -1.32
SNU71YGR013W KES1P35844 434 aaKnown RBP6.79□□□□□ -1.32
SNU71YGR013W SIF2P38262 535 aa6.79□□□□□ -1.32
SNU71YGR013W PCL7P40186 285 aa6.79□□□□□ -1.32
SNU71YGR013W PLB2Q03674 706 aa6.79□□□□□ -1.32
SNU71YGR013W CTK1Q03957 528 aaKnown RBP6.79□□□□□ -1.32
SNU71YGR013W CRF1Q04930 467 aa6.79□□□□□ -1.32
SNU71YGR013W MRD1Q06106 887 aaKnown RBP6.79□□□□□ -1.32
SNU71YGR013W MMR1Q06324 491 aa6.79□□□□□ -1.32
SNU71YGR013W SWT1Q12104 458 aa6.79□□□□□ -1.32
SNU71YGR013W LPX1Q12405 387 aaKnown RBP6.79□□□□□ -1.32
SNU71YGR013W HIS5P07172 385 aa6.79□□□□□ -1.32
SNU71YGR013W LAT1P12695 482 aaKnown RBP6.79□□□□□ -1.32
SNU71YGR013W PRE10P21242 288 aaKnown RBP RIP-Chip data6.79□□□□□ -1.32not detected
SNU71YGR013W YCR061WP25639 631 aa6.79□□□□□ -1.32
SNU71YGR013W POL12P38121 705 aaPredicted RBP6.79□□□□□ -1.32
SNU71YGR013W NAS2P40555 220 aa6.79□□□□□ -1.32
SNU71YGR013W VMA13P41807 478 aaKnown RBP6.79□□□□□ -1.32
SNU71YGR013W CHA4P43634 648 aa6.79□□□□□ -1.32
SNU71YGR013W RPA49Q01080 415 aaPredicted RBP6.79□□□□□ -1.32
SNU71YGR013W DPB4Q04603 196 aaKnown RBP6.79□□□□□ -1.32
SNU71YGR013W PAP1P29468 568 aaKnown RBP6.78□□□□□ -1.32
SNU71YGR013W HEL1P36113 551 aa6.78□□□□□ -1.32
SNU71YGR013W TIF4631P39935 952 aaKnown RBP6.78□□□□□ -1.32
SNU71YGR013W PRY1P47032 299 aa6.78□□□□□ -1.32
SNU71YGR013W YGR054WP53235 642 aaKnown RBP6.78□□□□□ -1.32
SNU71YGR013W NUP188P52593 1655 aaKnown RBP6.78□□□□□ -1.32
SNU71YGR013W RPC40P07703 335 aaKnown RBP6.77□□□□□ -1.33
SNU71YGR013W YML003WP0CF16 290 aa6.77□□□□□ -1.33
SNU71YGR013W BCS1P32839 456 aa6.77□□□□□ -1.33
SNU71YGR013W SWH1P35845 1188 aa6.77□□□□□ -1.33
SNU71YGR013W SEC24P40482 926 aaKnown RBP6.77□□□□□ -1.33
SNU71YGR013W RFX1P48743 811 aa6.77□□□□□ -1.33
SNU71YGR013W ATG29Q12092 213 aa6.77□□□□□ -1.33
SNU71YGR013W RPN5Q12250 445 aaKnown RBP6.77□□□□□ -1.33
SNU71YGR013W VPS34P22543 875 aa6.77□□□□□ -1.33
SNU71YGR013W SRB5P32585 307 aa6.77□□□□□ -1.33
SNU71YGR013W GYP6P32806 458 aa6.77□□□□□ -1.33
SNU71YGR013W TAT1P38085 619 aa6.77□□□□□ -1.33
SNU71YGR013W SAF1P38352 637 aa6.77□□□□□ -1.33
SNU71YGR013W YHR097CP38809 366 aaKnown RBP6.77□□□□□ -1.33
SNU71YGR013W FET5P43561 622 aa6.77□□□□□ -1.33
SNU71YGR013W PRS5Q12265 496 aaKnown RBP6.77□□□□□ -1.33
SNU71YGR013W TRM11Q12463 433 aa6.77□□□□□ -1.33
SNU71YGR013W GCD1P09032 578 aaPredicted RBP6.76□□□□□ -1.33
SNU71YGR013W EFR3Q03653 782 aaKnown RBP6.76□□□□□ -1.33
SNU71YGR013W RPC11Q04307 110 aaPredicted RBP6.76□□□□□ -1.33
SNU71YGR013W VPS38Q05919 439 aa6.76□□□□□ -1.33
SNU71YGR013W RRP36Q12481 300 aaPredicted RBP6.76□□□□□ -1.33
SNU71YGR013W IML1P47170 1584 aa6.75□□□□□ -1.33
SNU71YGR013W LRE1P25579 583 aaKnown RBP6.75□□□□□ -1.33
SNU71YGR013W SYN8P31377 255 aa6.75□□□□□ -1.33
SNU71YGR013W MSS1P32559 526 aaPredicted RBP6.75□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 18 ms