RNA–Protein interactions for RNA: YDR062W

LCB2, Transcript of Component of serine palmitoyltransferase, yeast

Gene LCB2, Length 1,686 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCB2	YDR062W	HPF1	Q05164	967 aa		5.44	□□□□□ -1.54
LCB2	YDR062W	KEL3	Q08979	651 aa	Predicted RBP	5.44	□□□□□ -1.54
LCB2	YDR062W	NPC2	Q12408	173 aa		5.44	□□□□□ -1.54
LCB2	YDR062W	YOR019W	Q99248	730 aa		5.44	□□□□□ -1.54
LCB2	YDR062W	YCR061W	P25639	631 aa		5.43	□□□□□ -1.54
LCB2	YDR062W	URA7	P28274	579 aa	Known RBP	5.43	□□□□□ -1.54
LCB2	YDR062W	SWH1	P35845	1188 aa		5.43	□□□□□ -1.54
LCB2	YDR062W	BUD16	P39988	312 aa		5.43	□□□□□ -1.54
LCB2	YDR062W	IME4	P41833	600 aa		5.43	□□□□□ -1.54
LCB2	YDR062W	EOS1	P53938	366 aa		5.43	□□□□□ -1.54
LCB2	YDR062W	CRF1	Q04930	467 aa		5.43	□□□□□ -1.54
LCB2	YDR062W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	5.43	□□□□□ -1.54	not detected
LCB2	YDR062W	SKS1	Q12505	502 aa		5.43	□□□□□ -1.54
LCB2	YDR062W	YPT6	Q99260	215 aa		5.43	□□□□□ -1.54
LCB2	YDR062W	AI1	P03875	834 aa		5.43	□□□□□ -1.54
LCB2	YDR062W	GCD1	P09032	578 aa	Predicted RBP	5.43	□□□□□ -1.54
LCB2	YDR062W	UIP5	P36137	443 aa		5.43	□□□□□ -1.54
LCB2	YDR062W	OTU2	P38747	307 aa	Known RBP	5.43	□□□□□ -1.54
LCB2	YDR062W	YJL206C	P39529	758 aa		5.43	□□□□□ -1.54
LCB2	YDR062W	PRP43	P53131	767 aa	Known RBP	5.43	□□□□□ -1.54
LCB2	YDR062W	YGR054W	P53235	642 aa	Known RBP	5.43	□□□□□ -1.54
LCB2	YDR062W	PLB2	Q03674	706 aa		5.43	□□□□□ -1.54
LCB2	YDR062W	FMP45	Q07651	309 aa		5.43	□□□□□ -1.54
LCB2	YDR062W	BUD7	Q08754	746 aa		5.43	□□□□□ -1.54
LCB2	YDR062W	HMI1	Q12039	706 aa		5.43	□□□□□ -1.54
LCB2	YDR062W	GPM3	Q12326	303 aa		5.43	□□□□□ -1.54
LCB2	YDR062W	CHC1	P22137	1653 aa	Known RBP	5.42	□□□□□ -1.54
LCB2	YDR062W	LRE1	P25579	583 aa	Known RBP	5.42	□□□□□ -1.54
LCB2	YDR062W	POT1	P27796	417 aa	Known RBP RIP-Chip data	5.42	□□□□□ -1.54	not detected
LCB2	YDR062W	PAP1	P29468	568 aa	Known RBP	5.42	□□□□□ -1.54
LCB2	YDR062W	SMI1	P32566	505 aa		5.42	□□□□□ -1.54
LCB2	YDR062W	BCS1	P32839	456 aa		5.42	□□□□□ -1.54
LCB2	YDR062W	LAS1	P36146	502 aa	Predicted RBP	5.42	□□□□□ -1.54
LCB2	YDR062W	POL12	P38121	705 aa	Predicted RBP	5.42	□□□□□ -1.54
LCB2	YDR062W	MCX1	P38323	520 aa	Predicted RBP	5.42	□□□□□ -1.54
LCB2	YDR062W	CCT6	P39079	546 aa		5.42	□□□□□ -1.54
LCB2	YDR062W	LSB3	P43603	459 aa	Known RBP	5.42	□□□□□ -1.54
LCB2	YDR062W	TCB2	P48231	1178 aa		5.42	□□□□□ -1.54
LCB2	YDR062W	RFX1	P48743	811 aa		5.42	□□□□□ -1.54
LCB2	YDR062W	LYS4	P49367	693 aa	Predicted RBP	5.42	□□□□□ -1.54
LCB2	YDR062W	CUL3	P53202	744 aa		5.42	□□□□□ -1.54
LCB2	YDR062W	ROY1	Q04847	553 aa		5.42	□□□□□ -1.54
LCB2	YDR062W	SPE3	Q12074	293 aa	Known RBP	5.42	□□□□□ -1.54
LCB2	YDR062W	ATG29	Q12092	213 aa		5.42	□□□□□ -1.54
LCB2	YDR062W	AFI1	Q99222	893 aa		5.42	□□□□□ -1.54
LCB2	YDR062W	ISN1	Q99312	450 aa		5.42	□□□□□ -1.54
LCB2	YDR062W	NUP157	P40064	1391 aa	Known RBP	5.41	□□□□□ -1.54
LCB2	YDR062W	CPR2	P23285	205 aa		5.41	□□□□□ -1.54
LCB2	YDR062W	EMC1	P25574	760 aa		5.41	□□□□□ -1.54
LCB2	YDR062W	SRB5	P32585	307 aa		5.41	□□□□□ -1.54
LCB2	YDR062W	TAT1	P38085	619 aa		5.41	□□□□□ -1.54
LCB2	YDR062W	PIG2	P40187	538 aa		5.41	□□□□□ -1.54
LCB2	YDR062W	EFM4	P40516	257 aa		5.41	□□□□□ -1.54
LCB2	YDR062W	FYV8	P46949	817 aa	Known RBP	5.41	□□□□□ -1.54
LCB2	YDR062W	CTH1	P47976	325 aa		5.41	□□□□□ -1.54
LCB2	YDR062W	ROT1	Q03691	256 aa		5.41	□□□□□ -1.54
LCB2	YDR062W	MRD1	Q06106	887 aa	Known RBP	5.41	□□□□□ -1.54
LCB2	YDR062W	ATG23	Q06671	453 aa		5.41	□□□□□ -1.54
LCB2	YDR062W	YBR085C-A	O43137	85 aa		5.4	□□□□□ -1.54
LCB2	YDR062W	LAT1	P12695	482 aa	Known RBP	5.4	□□□□□ -1.54
LCB2	YDR062W	CAF20	P12962	161 aa	Known RBP	5.4	□□□□□ -1.54
LCB2	YDR062W	COQ2	P32378	372 aa		5.4	□□□□□ -1.54
LCB2	YDR062W	FMO1	P38866	432 aa		5.4	□□□□□ -1.54
LCB2	YDR062W	NUP60	P39705	539 aa		5.4	□□□□□ -1.54
LCB2	YDR062W	TIF4631	P39935	952 aa	Known RBP	5.4	□□□□□ -1.54
LCB2	YDR062W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	5.4	□□□□□ -1.54	not detected
LCB2	YDR062W	BAP3	P41815	604 aa		5.4	□□□□□ -1.54
LCB2	YDR062W	YGL036W	P53185	909 aa	Predicted RBP	5.4	□□□□□ -1.54
LCB2	YDR062W	YNL058C	P53947	316 aa		5.4	□□□□□ -1.54
LCB2	YDR062W	ARX1	Q03862	593 aa	Known RBP	5.4	□□□□□ -1.54
LCB2	YDR062W	RGC1	Q06108	1083 aa	Known RBP	5.4	□□□□□ -1.54
LCB2	YDR062W	CHS5	Q12114	671 aa	Known RBP	5.4	□□□□□ -1.54
LCB2	YDR062W	YML003W	P0CF16	290 aa		5.4	□□□□□ -1.55
LCB2	YDR062W	YIH1	P25637	258 aa		5.4	□□□□□ -1.55
LCB2	YDR062W	CDC15	P27636	974 aa		5.4	□□□□□ -1.55
LCB2	YDR062W	SEC24	P40482	926 aa	Known RBP	5.4	□□□□□ -1.55
LCB2	YDR062W	TOF1	P53840	1238 aa		5.4	□□□□□ -1.55
LCB2	YDR062W	ORC3	P54790	616 aa		5.4	□□□□□ -1.55
LCB2	YDR062W	GTB1	Q04924	702 aa		5.4	□□□□□ -1.55
LCB2	YDR062W	RQC1	Q05468	723 aa	Known RBP	5.4	□□□□□ -1.55
LCB2	YDR062W	TDA6	Q06466	467 aa		5.4	□□□□□ -1.55
LCB2	YDR062W	YPL272C	Q08984	517 aa		5.4	□□□□□ -1.55
LCB2	YDR062W	YDL176W	Q12027	708 aa		5.4	□□□□□ -1.55
LCB2	YDR062W	PDR15	Q04182	1529 aa	Known RBP	5.4	□□□□□ -1.55
LCB2	YDR062W	CDC6	P09119	513 aa		5.39	□□□□□ -1.55
LCB2	YDR062W	PDE1	P22434	369 aa		5.39	□□□□□ -1.55
LCB2	YDR062W	PRP28	P23394	588 aa		5.39	□□□□□ -1.55
LCB2	YDR062W	ERV1	P27882	189 aa		5.39	□□□□□ -1.55
LCB2	YDR062W	SYN8	P31377	255 aa		5.39	□□□□□ -1.55
LCB2	YDR062W	TFB1	P32776	642 aa		5.39	□□□□□ -1.55
LCB2	YDR062W	AGP2	P38090	596 aa		5.39	□□□□□ -1.55
LCB2	YDR062W	SIF2	P38262	535 aa		5.39	□□□□□ -1.55
LCB2	YDR062W	ERC1	P38767	581 aa		5.39	□□□□□ -1.55
LCB2	YDR062W	FKH2	P41813	862 aa		5.39	□□□□□ -1.55
LCB2	YDR062W	VPS62	P53285	467 aa		5.39	□□□□□ -1.55
LCB2	YDR062W	RPA49	Q01080	415 aa	Predicted RBP	5.39	□□□□□ -1.55
LCB2	YDR062W	EFR3	Q03653	782 aa	Known RBP	5.39	□□□□□ -1.55
LCB2	YDR062W	BUD22	Q04347	519 aa	Known RBP	5.39	□□□□□ -1.55
LCB2	YDR062W	VPS38	Q05919	439 aa		5.39	□□□□□ -1.55
LCB2	YDR062W	NOP12	Q08208	459 aa	Known RBP	5.39	□□□□□ -1.55

Retrieved 100 of 5,963 RNA–protein pairs in 26 ms