RNA–Protein interactions for RNA: YDL225W

SHS1, Transcript of Component of the septin ring that is required for cytokinesis, yeastyeast

Gene SHS1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHS1YDL225W ARN1P38731 627 aa3.2□□□□□ -1.9
SHS1YDL225W SEC31P38968 1273 aaKnown RBP3.2□□□□□ -1.9
SHS1YDL225W MRX1P40050 688 aa3.2□□□□□ -1.9
SHS1YDL225W FMP10P40098 244 aa3.2□□□□□ -1.9
SHS1YDL225W YJR061WP40355 935 aa3.2□□□□□ -1.9
SHS1YDL225W ULP2P40537 1034 aaPredicted RBP3.2□□□□□ -1.9
SHS1YDL225W SNM1P40993 198 aa3.2□□□□□ -1.9
SHS1YDL225W IME4P41833 600 aa3.2□□□□□ -1.9
SHS1YDL225W SIP4P46954 829 aa3.2□□□□□ -1.9
SHS1YDL225W MUB1Q03162 620 aa3.2□□□□□ -1.9
SHS1YDL225W PDR8Q06149 701 aa3.2□□□□□ -1.9
SHS1YDL225W PFA4Q12006 378 aa3.2□□□□□ -1.9
SHS1YDL225W GET3Q12154 354 aaKnown RBP3.2□□□□□ -1.9
SHS1YDL225W NKP1Q12493 238 aa3.2□□□□□ -1.9
SHS1YDL225W CHS3P29465 1165 aa3.19□□□□□ -1.9
SHS1YDL225W OCT1P35999 772 aa3.19□□□□□ -1.9
SHS1YDL225W ALY1P36117 915 aa3.19□□□□□ -1.9
SHS1YDL225W MNT3P40549 630 aa3.19□□□□□ -1.9
SHS1YDL225W PIL1P53252 339 aaKnown RBP3.19□□□□□ -1.9
SHS1YDL225W BSC5P53755 489 aa3.19□□□□□ -1.9
SHS1YDL225W SUB1P54000 292 aaKnown RBP3.19□□□□□ -1.9
SHS1YDL225W VIP1Q06685 1146 aaKnown RBP3.19□□□□□ -1.9
SHS1YDL225W GPN2Q08726 347 aaPredicted RBP3.19□□□□□ -1.9
SHS1YDL225W YDR056CQ12025 205 aa3.19□□□□□ -1.9
SHS1YDL225W SKM1Q12469 655 aa3.19□□□□□ -1.9
SHS1YDL225W YER145C-AA0A023PYF4 145 aa3.18□□□□□ -1.9
SHS1YDL225W GAL4P04386 881 aa3.18□□□□□ -1.9
SHS1YDL225W YAP1P19880 650 aaKnown RBP3.18□□□□□ -1.9
SHS1YDL225W GFD2P25370 566 aaKnown RBP3.18□□□□□ -1.9
SHS1YDL225W MUD2P36084 527 aaKnown RBP3.18□□□□□ -1.9
SHS1YDL225W KTR3P38130 404 aaPredicted RBP3.18□□□□□ -1.9
SHS1YDL225W YEL068CP39977 110 aa3.18□□□□□ -1.9
SHS1YDL225W SLZ1P40167 298 aa3.18□□□□□ -1.9
SHS1YDL225W LTP1P40347 161 aa3.18□□□□□ -1.9
SHS1YDL225W PSA1P41940 361 aaKnown RBP3.18□□□□□ -1.9
SHS1YDL225W NET1P47035 1189 aa3.18□□□□□ -1.9
SHS1YDL225W INN1P53901 409 aa3.18□□□□□ -1.9
SHS1YDL225W YLR455WQ06188 304 aa3.18□□□□□ -1.9
SHS1YDL225W MCH4Q08268 501 aa3.18□□□□□ -1.9
SHS1YDL225W YLR049CQ12110 428 aa3.18□□□□□ -1.9
SHS1YDL225W CRC1Q12289 327 aa3.18□□□□□ -1.9
SHS1YDL225W YBR085C-AO43137 85 aa3.17□□□□□ -1.9
SHS1YDL225W CHO1P08456 276 aa3.17□□□□□ -1.9
SHS1YDL225W ECM10P39987 644 aa3.17□□□□□ -1.9
SHS1YDL225W TPA1P40032 644 aaKnown RBP3.17□□□□□ -1.9
SHS1YDL225W SEC24P40482 926 aaKnown RBP3.17□□□□□ -1.9
SHS1YDL225W YIL024CP40543 189 aa3.17□□□□□ -1.9
SHS1YDL225W CTK2P46962 323 aa3.17□□□□□ -1.9
SHS1YDL225W COP1P53622 1201 aaKnown RBP3.17□□□□□ -1.9
SHS1YDL225W SEC5P89102 971 aa3.17□□□□□ -1.9
SHS1YDL225W PIG1Q06216 648 aa3.17□□□□□ -1.9
SHS1YDL225W ENT4Q07872 247 aa3.17□□□□□ -1.9
SHS1YDL225W GPA1P08539 472 aa3.17□□□□□ -1.9
SHS1YDL225W CDC24P11433 854 aaPredicted RBP3.17□□□□□ -1.9
SHS1YDL225W TKL1P23254 680 aaKnown RBP3.17□□□□□ -1.9
SHS1YDL225W CNA1P23287 553 aa3.17□□□□□ -1.9
SHS1YDL225W ESL2P36168 1195 aa3.17□□□□□ -1.9
SHS1YDL225W FLO5P38894 1075 aa3.17□□□□□ -1.9
SHS1YDL225W VPS41P38959 992 aa3.17□□□□□ -1.9
SHS1YDL225W CFD1P40558 293 aa3.17□□□□□ -1.9
SHS1YDL225W RPN11P43588 306 aaKnown RBP3.17□□□□□ -1.9
SHS1YDL225W YFR020WP43600 232 aa3.17□□□□□ -1.9
SHS1YDL225W AAD10P47182 288 aa3.17□□□□□ -1.9
SHS1YDL225W GLO1P50107 326 aa3.17□□□□□ -1.9
SHS1YDL225W ECM22Q05958 814 aaPredicted RBP3.17□□□□□ -1.9
SHS1YDL225W FRE3Q08905 711 aa3.17□□□□□ -1.9
SHS1YDL225W RRI1Q12468 440 aa3.17□□□□□ -1.9
SHS1YDL225W ENT1Q12518 454 aa3.17□□□□□ -1.9
SHS1YDL225W CDC16P09798 840 aa3.16□□□□□ -1.9
SHS1YDL225W SWE1P32944 819 aa3.16□□□□□ -1.9
SHS1YDL225W TMA108P40462 946 aa3.16□□□□□ -1.9
SHS1YDL225W LYS14P40971 790 aa3.16□□□□□ -1.9
SHS1YDL225W ARC1P46672 376 aaKnown RBP3.16□□□□□ -1.9
SHS1YDL225W YGL036WP53185 909 aaPredicted RBP3.16□□□□□ -1.9
SHS1YDL225W IST1P53843 298 aaPredicted RBP3.16□□□□□ -1.9
SHS1YDL225W EAF7P53911 425 aaKnown RBP3.16□□□□□ -1.9
SHS1YDL225W PFA5Q03289 374 aa3.16□□□□□ -1.9
SHS1YDL225W RAD30Q04049 632 aa3.16□□□□□ -1.9
SHS1YDL225W SKG3Q06315 1026 aa3.16□□□□□ -1.9
SHS1YDL225W HXK2P04807 486 aaKnown RBP3.15□□□□□ -1.9
SHS1YDL225W PRE8P23639 250 aa3.15□□□□□ -1.9
SHS1YDL225W PXL1P36166 706 aa3.15□□□□□ -1.9
SHS1YDL225W UBP8P50102 471 aa3.15□□□□□ -1.9
SHS1YDL225W STP1Q00947 519 aa3.15□□□□□ -1.9
SHS1YDL225W YSA1Q01976 231 aa3.15□□□□□ -1.9
SHS1YDL225W RPL19AP0CX82 189 aaKnown RBP3.14□□□□□ -1.91
SHS1YDL225W RPL19BP0CX83 189 aaPredicted RBP3.14□□□□□ -1.91
SHS1YDL225W YER190C-BP0CX94 160 aa3.14□□□□□ -1.91
SHS1YDL225W YEL077W-AP0CX95 160 aa3.14□□□□□ -1.91
SHS1YDL225W YGR296C-BP0CX96 160 aa3.14□□□□□ -1.91
SHS1YDL225W YPL283W-BP0CX97 160 aa3.14□□□□□ -1.91
SHS1YDL225W YPR204C-AP0CX98 160 aa3.14□□□□□ -1.91
SHS1YDL225W SAN1P22470 610 aa3.14□□□□□ -1.91
SHS1YDL225W ECM32P32644 1121 aaKnown RBP3.14□□□□□ -1.91
SHS1YDL225W RTS1P38903 757 aa3.14□□□□□ -1.91
SHS1YDL225W JHD1P40034 492 aa3.14□□□□□ -1.91
SHS1YDL225W BUR6P40096 142 aa3.14□□□□□ -1.91
SHS1YDL225W INA17Q02888 182 aa3.14□□□□□ -1.91
SHS1YDL225W YKU80Q04437 629 aa3.14□□□□□ -1.91
SHS1YDL225W SWF1Q04629 336 aa3.14□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 292.3 ms