RNA–Protein interactions for RNA: YDL154W

MSH5, Transcript of Protein of the MutS family, yeastyeast

Gene MSH5, Length 2,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH5YDL154W HSP33Q08914 237 aaKnown RBP1.89□□□□□ -2.11
MSH5YDL154W HSP32Q08992 237 aa1.89□□□□□ -2.11
MSH5YDL154W SWT1Q12104 458 aa1.89□□□□□ -2.11
MSH5YDL154W TY2A-BQ12260 438 aa1.89□□□□□ -2.11
MSH5YDL154W TY2A-OR2Q12293 438 aa1.89□□□□□ -2.11
MSH5YDL154W TAF3Q12297 353 aa1.89□□□□□ -2.11
MSH5YDL154W TY2A-DR1Q12392 438 aa1.89□□□□□ -2.11
MSH5YDL154W TY2A-OR1Q12439 438 aa1.89□□□□□ -2.11
MSH5YDL154W PCD1Q12524 340 aa1.89□□□□□ -2.11
MSH5YDL154W TY2A-DR3Q99303 438 aa1.89□□□□□ -2.11
MSH5YDL154W SUI3P09064 285 aaKnown RBP1.89□□□□□ -2.11
MSH5YDL154W URK1P27515 501 aa1.89□□□□□ -2.11
MSH5YDL154W GDA1P32621 518 aa1.89□□□□□ -2.11
MSH5YDL154W UGP1P32861 499 aaKnown RBP1.89□□□□□ -2.11
MSH5YDL154W SKI2P35207 1287 aaKnown RBP RIP-Chip data1.89□□□□□ -2.11not detected
MSH5YDL154W JNM1P36224 373 aa1.89□□□□□ -2.11
MSH5YDL154W MIT1P40002 666 aa1.89□□□□□ -2.11
MSH5YDL154W PFK26P40433 827 aaKnown RBP1.89□□□□□ -2.11
MSH5YDL154W RPN11P43588 306 aaKnown RBP1.89□□□□□ -2.11
MSH5YDL154W PSP1P50896 841 aaKnown RBP1.89□□□□□ -2.11
MSH5YDL154W YDR109CQ04585 715 aa1.89□□□□□ -2.11
MSH5YDL154W COG4Q06096 861 aa1.89□□□□□ -2.11
MSH5YDL154W ORM2Q06144 216 aa1.89□□□□□ -2.11
MSH5YDL154W TMA16Q08687 178 aa1.89□□□□□ -2.11
MSH5YDL154W ULA1Q12059 462 aa1.89□□□□□ -2.11
MSH5YDL154W HUA2Q12134 243 aa1.89□□□□□ -2.11
MSH5YDL154W YBR255C-AQ3E776 120 aa1.89□□□□□ -2.11
MSH5YDL154W YOR111WQ99210 232 aa1.89□□□□□ -2.11
MSH5YDL154W COX1P00401 534 aa1.88□□□□□ -2.11
MSH5YDL154W RPL7AP05737 244 aaKnown RBP1.88□□□□□ -2.11
MSH5YDL154W RPC34P32910 317 aa1.88□□□□□ -2.11
MSH5YDL154W AFG3P39925 761 aa1.88□□□□□ -2.11
MSH5YDL154W YEL020CP39994 560 aa1.88□□□□□ -2.11
MSH5YDL154W YER010CP40011 234 aa1.88□□□□□ -2.11
MSH5YDL154W YJR061WP40355 935 aa1.88□□□□□ -2.11
MSH5YDL154W LYS4P49367 693 aaPredicted RBP1.88□□□□□ -2.11
MSH5YDL154W PLM2Q04383 521 aa1.88□□□□□ -2.11
MSH5YDL154W RPL7BQ12213 244 aaKnown RBP1.88□□□□□ -2.11
MSH5YDL154W AI5_ALPHAQ9ZZX1 630 aa1.88□□□□□ -2.11
MSH5YDL154W SEC16P48415 2195 aaKnown RBP1.88□□□□□ -2.11
MSH5YDL154W BIK1P11709 440 aa1.88□□□□□ -2.11
MSH5YDL154W AAD3P25612 363 aa1.88□□□□□ -2.11
MSH5YDL154W LAC1P28496 418 aa1.88□□□□□ -2.11
MSH5YDL154W YBL029WP38201 376 aa1.88□□□□□ -2.11
MSH5YDL154W LYS14P40971 790 aa1.88□□□□□ -2.11
MSH5YDL154W BSC5P53755 489 aa1.88□□□□□ -2.11
MSH5YDL154W RPS15Q01855 142 aaKnown RBP1.88□□□□□ -2.11
MSH5YDL154W YPL071CQ02864 156 aa1.88□□□□□ -2.11
MSH5YDL154W YML119WQ03208 357 aa1.88□□□□□ -2.11
MSH5YDL154W USA1Q03714 838 aa1.88□□□□□ -2.11
MSH5YDL154W VAM6Q07468 1049 aa1.88□□□□□ -2.11
MSH5YDL154W TRM8Q12009 286 aa1.88□□□□□ -2.11
MSH5YDL154W YDR056CQ12025 205 aa1.88□□□□□ -2.11
MSH5YDL154W SEC3P33332 1336 aaKnown RBP1.87□□□□□ -2.11
MSH5YDL154W FUM1P08417 488 aaKnown RBP1.87□□□□□ -2.11
MSH5YDL154W RFA2P26754 273 aaKnown RBP1.87□□□□□ -2.11
MSH5YDL154W LHS1P36016 881 aa1.87□□□□□ -2.11
MSH5YDL154W DJP1P40564 432 aa1.87□□□□□ -2.11
MSH5YDL154W YFL015CP43578 164 aa1.87□□□□□ -2.11
MSH5YDL154W RRT6P53117 311 aaPredicted RBP1.87□□□□□ -2.11
MSH5YDL154W YGL117WP53133 265 aa1.87□□□□□ -2.11
MSH5YDL154W YNL058CP53947 316 aa1.87□□□□□ -2.11
MSH5YDL154W ATG23Q06671 453 aa1.87□□□□□ -2.11
MSH5YDL154W TSR2Q06672 205 aaKnown RBP1.87□□□□□ -2.11
MSH5YDL154W CHO2P05374 869 aaKnown RBP1.87□□□□□ -2.11
MSH5YDL154W CDC24P11433 854 aaPredicted RBP1.87□□□□□ -2.11
MSH5YDL154W AMD2P22580 549 aa1.87□□□□□ -2.11
MSH5YDL154W RRP43P25359 394 aaPredicted RBP1.87□□□□□ -2.11
MSH5YDL154W MSS51P32335 436 aa1.87□□□□□ -2.11
MSH5YDL154W PDR3P33200 976 aa1.87□□□□□ -2.11
MSH5YDL154W MUD2P36084 527 aaKnown RBP1.87□□□□□ -2.11
MSH5YDL154W ERC1P38767 581 aa1.87□□□□□ -2.11
MSH5YDL154W DPH1P40487 425 aaKnown RBP1.87□□□□□ -2.11
MSH5YDL154W CIR1P42940 261 aa1.87□□□□□ -2.11
MSH5YDL154W DCP2P53550 970 aaKnown RBP1.87□□□□□ -2.11
MSH5YDL154W PCL8Q08966 492 aa1.87□□□□□ -2.11
MSH5YDL154W LCB4Q12246 624 aa1.87□□□□□ -2.11
MSH5YDL154W YBR126W-AQ8TGU7 68 aa1.87□□□□□ -2.11
MSH5YDL154W RTC1Q08281 1341 aa1.86□□□□□ -2.11
MSH5YDL154W YBR085C-AO43137 85 aa1.86□□□□□ -2.11
MSH5YDL154W ERG8P24521 451 aa1.86□□□□□ -2.11
MSH5YDL154W SOF1P33750 489 aaKnown RBP1.86□□□□□ -2.11
MSH5YDL154W VBA2P38358 474 aaKnown RBP1.86□□□□□ -2.11
MSH5YDL154W ASG1P40467 964 aa1.86□□□□□ -2.11
MSH5YDL154W CSL4P53859 292 aaPredicted RBP1.86□□□□□ -2.11
MSH5YDL154W RPT6Q01939 405 aaKnown RBP1.86□□□□□ -2.11
MSH5YDL154W GIS1Q03833 894 aa1.86□□□□□ -2.11
MSH5YDL154W GTB1Q04924 702 aa1.86□□□□□ -2.11
MSH5YDL154W YDL242WQ07746 117 aa1.86□□□□□ -2.11
MSH5YDL154W TCO89Q08921 799 aa1.86□□□□□ -2.11
MSH5YDL154W MRN1Q08925 612 aaKnown RBP RIP-Chip data1.86□□□□□ -2.11not detected
MSH5YDL154W YOL087CQ99247 1116 aa1.86□□□□□ -2.11
MSH5YDL154W RAD9P14737 1309 aa1.86□□□□□ -2.11
MSH5YDL154W SAN1P22470 610 aa1.86□□□□□ -2.11
MSH5YDL154W LRE1P25579 583 aaKnown RBP1.86□□□□□ -2.11
MSH5YDL154W PEP3P27801 918 aa1.86□□□□□ -2.11
MSH5YDL154W PAH1P32567 862 aa1.86□□□□□ -2.11
MSH5YDL154W ALY1P36117 915 aa1.86□□□□□ -2.11
MSH5YDL154W YPT10P38146 199 aa1.86□□□□□ -2.11
MSH5YDL154W RTS1P38903 757 aa1.86□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 22 ms