RNA–Protein interactions for RNA: YCR004C

YCP4, Transcript of Protein of unknown function, yeastyeast

Gene YCP4, Length 744 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCP4YCR004C YLL056CQ12177 298 aa8.29□□□□□ -1.08
YCP4YCR004C AI5_ALPHAQ9ZZX1 630 aa8.29□□□□□ -1.08
YCP4YCR004C SEM1O94742 89 aa8.28□□□□□ -1.08
YCP4YCR004C PHO13P19881 312 aa8.28□□□□□ -1.08
YCP4YCR004C PHO84P25297 587 aaKnown RBP8.28□□□□□ -1.08
YCP4YCR004C RNQ1P25367 405 aa8.28□□□□□ -1.08
YCP4YCR004C MSH1P25846 959 aa8.28□□□□□ -1.08
YCP4YCR004C HOG1P32485 435 aa8.28□□□□□ -1.08
YCP4YCR004C CTF13P35203 478 aa8.28□□□□□ -1.08
YCP4YCR004C DBP8P38719 431 aa8.28□□□□□ -1.08
YCP4YCR004C MND2P40577 368 aa8.28□□□□□ -1.08
YCP4YCR004C RTS3P53289 263 aa8.28□□□□□ -1.08
YCP4YCR004C EFM6P53970 246 aa8.28□□□□□ -1.08
YCP4YCR004C HOS3Q02959 697 aaKnown RBP8.28□□□□□ -1.08
YCP4YCR004C BUD7Q08754 746 aa8.28□□□□□ -1.08
YCP4YCR004C GLE1Q12315 538 aa8.28□□□□□ -1.08
YCP4YCR004C IPP1P00817 287 aaKnown RBP8.27□□□□□ -1.09
YCP4YCR004C CDC13P32797 924 aaKnown RBP8.27□□□□□ -1.09
YCP4YCR004C DOM34P33309 386 aa8.27□□□□□ -1.09
YCP4YCR004C YBL055CP34220 418 aaPredicted RBP8.27□□□□□ -1.09
YCP4YCR004C SQT1P35184 431 aa8.27□□□□□ -1.09
YCP4YCR004C PHO11P35842 467 aa8.27□□□□□ -1.09
YCP4YCR004C PHO12P38693 467 aa8.27□□□□□ -1.09
YCP4YCR004C TIM17P39515 158 aa8.27□□□□□ -1.09
YCP4YCR004C YAT2P40017 923 aa8.27□□□□□ -1.09
YCP4YCR004C ARG2P40360 574 aa8.27□□□□□ -1.09
YCP4YCR004C VPS75P53853 264 aa8.27□□□□□ -1.09
YCP4YCR004C CCE1Q03702 353 aa8.27□□□□□ -1.09
YCP4YCR004C YDR132CQ03900 495 aa8.27□□□□□ -1.09
YCP4YCR004C UTP5Q04177 643 aaKnown RBP8.27□□□□□ -1.09
YCP4YCR004C ENT2Q05785 613 aa8.27□□□□□ -1.09
YCP4YCR004C VID22Q05934 901 aa8.27□□□□□ -1.09
YCP4YCR004C ESC2Q06340 456 aa8.27□□□□□ -1.09
YCP4YCR004C GUP2Q08929 609 aa8.27□□□□□ -1.09
YCP4YCR004C PNS1Q12412 539 aa8.27□□□□□ -1.09
YCP4YCR004C NTH1P32356 751 aa8.26□□□□□ -1.09
YCP4YCR004C NTR2P36118 322 aaPredicted RBP8.26□□□□□ -1.09
YCP4YCR004C LYS1P38998 373 aaRIP-Chip data8.26□□□□□ -1.09 RIP-Chip
YCP4YCR004C LSM5P40089 93 aaKnown RBP8.26□□□□□ -1.09
YCP4YCR004C ATG3P40344 310 aa8.26□□□□□ -1.09
YCP4YCR004C SPG5P42933 373 aa8.26□□□□□ -1.09
YCP4YCR004C YML6P51998 286 aa8.26□□□□□ -1.09
YCP4YCR004C GND2P53319 492 aa8.26□□□□□ -1.09
YCP4YCR004C ARE2P53629 642 aaKnown RBP8.26□□□□□ -1.09
YCP4YCR004C MET14Q02196 202 aa8.26□□□□□ -1.09
YCP4YCR004C NEW1Q08972 1196 aaKnown RBP8.26□□□□□ -1.09
YCP4YCR004C PFA4Q12006 378 aa8.26□□□□□ -1.09
YCP4YCR004C RRP12Q12754 1228 aaKnown RBP8.26□□□□□ -1.09
YCP4YCR004C AI4P03878 556 aa8.25□□□□□ -1.09
YCP4YCR004C VAN1P23642 535 aa8.25□□□□□ -1.09
YCP4YCR004C LDB16P25587 256 aa8.25□□□□□ -1.09
YCP4YCR004C NDI1P32340 513 aa8.25□□□□□ -1.09
YCP4YCR004C IMP3P32899 183 aaPredicted RBP8.25□□□□□ -1.09
YCP4YCR004C PRP18P33411 251 aaPredicted RBP8.25□□□□□ -1.09
YCP4YCR004C SET5P38890 526 aaKnown RBP8.25□□□□□ -1.09
YCP4YCR004C YJL107CP42947 387 aa8.25□□□□□ -1.09
YCP4YCR004C ALY2P47029 1046 aa8.25□□□□□ -1.09
YCP4YCR004C BRO1P48582 844 aa8.25□□□□□ -1.09
YCP4YCR004C NUP100Q02629 959 aa8.25□□□□□ -1.09
YCP4YCR004C YOL024WQ08172 172 aa8.25□□□□□ -1.09
YCP4YCR004C NHA1Q99271 985 aa8.25□□□□□ -1.09
YCP4YCR004C HRP1Q99383 534 aaKnown RBP8.25□□□□□ -1.09
YCP4YCR004C TRA1P38811 3744 aa8.25□□□□□ -1.09
YCP4YCR004C HOP1P20050 605 aa8.24□□□□□ -1.09
YCP4YCR004C MVD1P32377 396 aaKnown RBP8.24□□□□□ -1.09
YCP4YCR004C YHL008CP38750 627 aa8.24□□□□□ -1.09
YCP4YCR004C MTG2P38860 518 aa8.24□□□□□ -1.09
YCP4YCR004C NMA111P53920 997 aa8.24□□□□□ -1.09
YCP4YCR004C ARP4P80428 489 aa8.24□□□□□ -1.09
YCP4YCR004C YDR278CQ05612 105 aa8.24□□□□□ -1.09
YCP4YCR004C LDB17Q12342 491 aa8.24□□□□□ -1.09
YCP4YCR004C YLR149CQ99296 730 aa8.24□□□□□ -1.09
YCP4YCR004C MSB1P21339 1137 aaKnown RBP8.23□□□□□ -1.09
YCP4YCR004C MSP1P28737 362 aa8.23□□□□□ -1.09
YCP4YCR004C UTR2P32623 467 aa8.23□□□□□ -1.09
YCP4YCR004C SKN1P33336 771 aa8.23□□□□□ -1.09
YCP4YCR004C MRPL37P36532 105 aa8.23□□□□□ -1.09
YCP4YCR004C MAK5P38112 773 aaPredicted RBP8.23□□□□□ -1.09
YCP4YCR004C YBP1P38315 674 aa8.23□□□□□ -1.09
YCP4YCR004C YHR033WP38690 423 aa8.23□□□□□ -1.09
YCP4YCR004C PTC2P39966 464 aaKnown RBP8.23□□□□□ -1.09
YCP4YCR004C YEL073CP39974 107 aa8.23□□□□□ -1.09
YCP4YCR004C LRO1P40345 661 aa8.23□□□□□ -1.09
YCP4YCR004C ZRG17P53735 605 aa8.23□□□□□ -1.09
YCP4YCR004C ERG5P54781 538 aa8.23□□□□□ -1.09
YCP4YCR004C TRS23Q03784 219 aa8.23□□□□□ -1.09
YCP4YCR004C VTA1Q06263 330 aa8.23□□□□□ -1.09
YCP4YCR004C YLR030WQ07967 263 aa8.23□□□□□ -1.09
YCP4YCR004C YDR018CQ12185 396 aa8.23□□□□□ -1.09
YCP4YCR004C MDM35O60200 86 aa8.22□□□□□ -1.09
YCP4YCR004C RPL43AP0CX25 92 aaKnown RBP8.22□□□□□ -1.09
YCP4YCR004C RPL43BP0CX26 92 aa8.22□□□□□ -1.09
YCP4YCR004C YCR006CP25350 157 aa8.22□□□□□ -1.09
YCP4YCR004C NRP1P32770 719 aaKnown RBP RIP-Chip data8.22□□□□□ -1.09not detected
YCP4YCR004C STB6P36085 766 aa8.22□□□□□ -1.09
YCP4YCR004C YHR182WP38870 785 aa8.22□□□□□ -1.09
YCP4YCR004C CKB2P38930 258 aa8.22□□□□□ -1.09
YCP4YCR004C IME4P41833 600 aa8.22□□□□□ -1.09
YCP4YCR004C NNF1P47149 201 aa8.22□□□□□ -1.09
YCP4YCR004C RIM21P48565 533 aa8.22□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 60.3 ms