RNA–Protein interactions for RNA: YBR170C

NPL4, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene NPL4, Length 1,743 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NPL4YBR170C SPT7P35177 1332 aa4.59□□□□□ -1.68
NPL4YBR170C PMA1P05030 918 aaKnown RBP4.58□□□□□ -1.68
NPL4YBR170C TPM1P17536 199 aaKnown RBP4.58□□□□□ -1.68
NPL4YBR170C STE4P18851 423 aa4.58□□□□□ -1.68
NPL4YBR170C CDC15P27636 974 aa4.58□□□□□ -1.68
NPL4YBR170C DPH2P32461 534 aa4.58□□□□□ -1.68
NPL4YBR170C ANP1P32629 500 aa4.58□□□□□ -1.68
NPL4YBR170C SAS3P34218 831 aa4.58□□□□□ -1.68
NPL4YBR170C GCS1P35197 352 aa4.58□□□□□ -1.68
NPL4YBR170C SGN1P40561 250 aaKnown RBP RIP-Chip data4.58□□□□□ -1.68not detected
NPL4YBR170C RIA1P53893 1110 aa4.58□□□□□ -1.68
NPL4YBR170C VPS9P54787 451 aa4.58□□□□□ -1.68
NPL4YBR170C CRN1Q06440 651 aa4.58□□□□□ -1.68
NPL4YBR170C YDL242WQ07746 117 aa4.58□□□□□ -1.68
NPL4YBR170C TGS1Q12052 315 aa4.58□□□□□ -1.68
NPL4YBR170C ALG7P07286 448 aa4.58□□□□□ -1.68
NPL4YBR170C PDB1P32473 366 aaKnown RBP4.58□□□□□ -1.68
NPL4YBR170C LOT5P34234 306 aa4.58□□□□□ -1.68
NPL4YBR170C VID24P38263 362 aa4.58□□□□□ -1.68
NPL4YBR170C DOT5P40553 215 aa4.58□□□□□ -1.68
NPL4YBR170C SWP82P43554 623 aa4.58□□□□□ -1.68
NPL4YBR170C NPA3P47122 385 aa4.58□□□□□ -1.68
NPL4YBR170C ATG4P53867 494 aa4.58□□□□□ -1.68
NPL4YBR170C YAT1P80235 687 aa4.58□□□□□ -1.68
NPL4YBR170C CIK1Q01649 594 aa4.58□□□□□ -1.68
NPL4YBR170C RNT1Q02555 471 aa4.58□□□□□ -1.68
NPL4YBR170C ERB1Q04660 807 aaKnown RBP4.58□□□□□ -1.68
NPL4YBR170C MRN1Q08925 612 aaKnown RBP RIP-Chip data4.58□□□□□ -1.68not detected
NPL4YBR170C BAG7Q12128 409 aa4.58□□□□□ -1.68
NPL4YBR170C COX1P00401 534 aa4.57□□□□□ -1.68
NPL4YBR170C AAC1P04710 309 aa4.57□□□□□ -1.68
NPL4YBR170C CLB3P24870 427 aa4.57□□□□□ -1.68
NPL4YBR170C STE50P25344 346 aa4.57□□□□□ -1.68
NPL4YBR170C SIP1P32578 815 aa4.57□□□□□ -1.68
NPL4YBR170C HES1P35843 434 aa4.57□□□□□ -1.68
NPL4YBR170C STB6P36085 766 aa4.57□□□□□ -1.68
NPL4YBR170C CST26P38226 397 aa4.57□□□□□ -1.68
NPL4YBR170C RXT2P38255 430 aa4.57□□□□□ -1.68
NPL4YBR170C ERC1P38767 581 aa4.57□□□□□ -1.68
NPL4YBR170C YNG2P38806 282 aaKnown RBP4.57□□□□□ -1.68
NPL4YBR170C FUN12P39730 1002 aaKnown RBP4.57□□□□□ -1.68
NPL4YBR170C MSY1P48527 492 aa4.57□□□□□ -1.68
NPL4YBR170C STR3P53101 465 aaKnown RBP4.57□□□□□ -1.68
NPL4YBR170C UBP16Q02863 499 aa4.57□□□□□ -1.68
NPL4YBR170C TRS23Q03784 219 aa4.57□□□□□ -1.68
NPL4YBR170C AI5_ALPHAQ9ZZX1 630 aa4.57□□□□□ -1.68
NPL4YBR170C CHO2P05374 869 aaKnown RBP4.56□□□□□ -1.68
NPL4YBR170C PPR1P07272 904 aaPredicted RBP4.56□□□□□ -1.68
NPL4YBR170C SES1P07284 462 aaKnown RBP4.56□□□□□ -1.68
NPL4YBR170C ARD1P07347 238 aaPredicted RBP4.56□□□□□ -1.68
NPL4YBR170C YIH1P25637 258 aa4.56□□□□□ -1.68
NPL4YBR170C AGP2P38090 596 aa4.56□□□□□ -1.68
NPL4YBR170C CHS7P38843 316 aa4.56□□□□□ -1.68
NPL4YBR170C MAM1P40065 302 aa4.56□□□□□ -1.68
NPL4YBR170C SSU1P41930 458 aa4.56□□□□□ -1.68
NPL4YBR170C CTK2P46962 323 aa4.56□□□□□ -1.68
NPL4YBR170C PHO23P50947 330 aa4.56□□□□□ -1.68
NPL4YBR170C AIM32Q04689 311 aa4.56□□□□□ -1.68
NPL4YBR170C MRD1Q06106 887 aaKnown RBP4.56□□□□□ -1.68
NPL4YBR170C SWA2Q06677 668 aa4.56□□□□□ -1.68
NPL4YBR170C BMS1Q08965 1183 aaKnown RBP4.56□□□□□ -1.68
NPL4YBR170C LAM4P38800 1345 aa4.56□□□□□ -1.68
NPL4YBR170C STE12P13574 688 aa4.55□□□□□ -1.68
NPL4YBR170C APE1P14904 514 aa4.55□□□□□ -1.68
NPL4YBR170C SRP54P20424 541 aaKnown RBP4.55□□□□□ -1.68
NPL4YBR170C MNE1P24720 663 aa4.55□□□□□ -1.68
NPL4YBR170C NTR2P36118 322 aaPredicted RBP4.55□□□□□ -1.68
NPL4YBR170C RPF2P36160 344 aaKnown RBP4.55□□□□□ -1.68
NPL4YBR170C PPS1P38148 807 aa4.55□□□□□ -1.68
NPL4YBR170C BNI5P53890 448 aaKnown RBP4.55□□□□□ -1.68
NPL4YBR170C BUD22Q04347 519 aaKnown RBP4.55□□□□□ -1.68
NPL4YBR170C YDR286CQ05530 114 aa4.55□□□□□ -1.68
NPL4YBR170C VPS38Q05919 439 aa4.55□□□□□ -1.68
NPL4YBR170C YLR040CQ07988 224 aa4.55□□□□□ -1.68
NPL4YBR170C Q0010Q9ZZX9 128 aa4.55□□□□□ -1.68
NPL4YBR170C YRF1-4O13559 1382 aa4.55□□□□□ -1.68
NPL4YBR170C CLB1P24868 471 aa4.55□□□□□ -1.68
NPL4YBR170C KRR1P25586 316 aaPredicted RBP4.55□□□□□ -1.68
NPL4YBR170C HRR25P29295 494 aaKnown RBP4.55□□□□□ -1.68
NPL4YBR170C MDL1P33310 695 aa4.55□□□□□ -1.68
NPL4YBR170C UBX6P47049 396 aa4.55□□□□□ -1.68
NPL4YBR170C ATP22P50273 684 aaPredicted RBP4.55□□□□□ -1.68
NPL4YBR170C ART5P53244 586 aaKnown RBP4.55□□□□□ -1.68
NPL4YBR170C DCP2P53550 970 aaKnown RBP4.55□□□□□ -1.68
NPL4YBR170C YDR109CQ04585 715 aa4.55□□□□□ -1.68
NPL4YBR170C CRT10Q08226 957 aa4.55□□□□□ -1.68
NPL4YBR170C ATG29Q12092 213 aa4.55□□□□□ -1.68
NPL4YBR170C LCB4Q12246 624 aa4.55□□□□□ -1.68
NPL4YBR170C PAR32Q12515 295 aaKnown RBP4.55□□□□□ -1.68
NPL4YBR170C ISN1Q99312 450 aa4.55□□□□□ -1.68
NPL4YBR170C PCT1P13259 424 aa4.54□□□□□ -1.68
NPL4YBR170C AAP1P37898 856 aaKnown RBP4.54□□□□□ -1.68
NPL4YBR170C MNN2P38069 597 aa4.54□□□□□ -1.68
NPL4YBR170C RFC1P38630 861 aaKnown RBP4.54□□□□□ -1.68
NPL4YBR170C MTG2P38860 518 aa4.54□□□□□ -1.68
NPL4YBR170C MAF1P41910 395 aa4.54□□□□□ -1.68
NPL4YBR170C PMT6P42934 759 aa4.54□□□□□ -1.68
NPL4YBR170C BTN2P53286 410 aa4.54□□□□□ -1.68
NPL4YBR170C RPC11Q04307 110 aaPredicted RBP4.54□□□□□ -1.68
NPL4YBR170C YDL073WQ07454 984 aa4.54□□□□□ -1.68
Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms