RNA–Protein interactions for RNA: YBR135W

CKS1, Transcript of Cyclin-dependent protein kinase regulatory subunit and adaptor, yeast

Gene CKS1, Length 453 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CKS1	YBR135W	RFA2	P26754	273 aa	Known RBP	5.25	□□□□□ -1.57
CKS1	YBR135W	YMC1	P32331	307 aa		5.25	□□□□□ -1.57
CKS1	YBR135W	VBA2	P38358	474 aa	Known RBP	5.25	□□□□□ -1.57
CKS1	YBR135W	MSY1	P48527	492 aa		5.25	□□□□□ -1.57
CKS1	YBR135W	APM1	Q00776	475 aa	Predicted RBP	5.25	□□□□□ -1.57
CKS1	YBR135W	PSK2	Q08217	1101 aa		5.25	□□□□□ -1.57
CKS1	YBR135W	MED1	Q12321	566 aa		5.25	□□□□□ -1.57
CKS1	YBR135W	PDR12	Q02785	1511 aa		5.24	□□□□□ -1.57
CKS1	YBR135W	DNF2	Q12675	1612 aa		5.24	□□□□□ -1.57
CKS1	YBR135W	LAC1	P28496	418 aa		5.24	□□□□□ -1.57
CKS1	YBR135W	PAC2	P39937	518 aa		5.24	□□□□□ -1.57
CKS1	YBR135W	PFK26	P40433	827 aa	Known RBP	5.24	□□□□□ -1.57
CKS1	YBR135W	UBP7	P40453	1071 aa		5.24	□□□□□ -1.57
CKS1	YBR135W	ARC1	P46672	376 aa	Known RBP	5.24	□□□□□ -1.57
CKS1	YBR135W	YNR061C	P53747	219 aa		5.24	□□□□□ -1.57
CKS1	YBR135W	BSC5	P53755	489 aa		5.24	□□□□□ -1.57
CKS1	YBR135W	IMH1	Q06704	911 aa	Known RBP	5.24	□□□□□ -1.57
CKS1	YBR135W	NUS1	Q12063	375 aa		5.24	□□□□□ -1.57
CKS1	YBR135W	ENT1	Q12518	454 aa		5.24	□□□□□ -1.57
CKS1	YBR135W	IRC20	Q06554	1556 aa		5.24	□□□□□ -1.57
CKS1	YBR135W	SEC3	P33332	1336 aa	Known RBP	5.23	□□□□□ -1.57
CKS1	YBR135W	ADE5,7	P07244	802 aa	Known RBP	5.23	□□□□□ -1.57
CKS1	YBR135W	HEM1	P09950	548 aa	Predicted RBP	5.23	□□□□□ -1.57
CKS1	YBR135W	YSP3	P25036	478 aa		5.23	□□□□□ -1.57
CKS1	YBR135W	SRB5	P32585	307 aa		5.23	□□□□□ -1.57
CKS1	YBR135W	TFC3	P34111	1160 aa		5.23	□□□□□ -1.57
CKS1	YBR135W	KES1	P35844	434 aa	Known RBP	5.23	□□□□□ -1.57
CKS1	YBR135W	EXO1	P39875	702 aa		5.23	□□□□□ -1.57
CKS1	YBR135W	PHM8	P40025	321 aa		5.23	□□□□□ -1.57
CKS1	YBR135W	UBX6	P47049	396 aa		5.23	□□□□□ -1.57
CKS1	YBR135W	YRB30	P53107	440 aa	Predicted RBP	5.23	□□□□□ -1.57
CKS1	YBR135W	CYK3	Q07533	885 aa		5.23	□□□□□ -1.57
CKS1	YBR135W	SKM1	Q12469	655 aa		5.23	□□□□□ -1.57
CKS1	YBR135W	TRM3	Q07527	1436 aa		5.23	□□□□□ -1.57
CKS1	YBR135W	RPL19A	P0CX82	189 aa	Known RBP	5.22	□□□□□ -1.57
CKS1	YBR135W	RPL19B	P0CX83	189 aa	Predicted RBP	5.22	□□□□□ -1.57
CKS1	YBR135W	SPO11	P23179	398 aa		5.22	□□□□□ -1.57
CKS1	YBR135W	ADY2	P25613	283 aa		5.22	□□□□□ -1.57
CKS1	YBR135W	LYS14	P40971	790 aa		5.22	□□□□□ -1.57
CKS1	YBR135W	CIR1	P42940	261 aa		5.22	□□□□□ -1.57
CKS1	YBR135W	AAD10	P47182	288 aa		5.22	□□□□□ -1.57
CKS1	YBR135W	AAT1	Q01802	451 aa		5.22	□□□□□ -1.57
CKS1	YBR135W	YDR109C	Q04585	715 aa		5.22	□□□□□ -1.57
CKS1	YBR135W	PDR15	Q04182	1529 aa	Known RBP	5.22	□□□□□ -1.57
CKS1	YBR135W	DOP1	Q03921	1698 aa		5.21	□□□□□ -1.57
CKS1	YBR135W	IQG1	Q12280	1495 aa		5.21	□□□□□ -1.58
CKS1	YBR135W	AQY1	P0CD91	305 aa		5.21	□□□□□ -1.58
CKS1	YBR135W	CDC24	P11433	854 aa	Predicted RBP	5.21	□□□□□ -1.58
CKS1	YBR135W	PCT1	P13259	424 aa		5.21	□□□□□ -1.58
CKS1	YBR135W	RPC34	P32910	317 aa		5.21	□□□□□ -1.58
CKS1	YBR135W	ALY1	P36117	915 aa		5.21	□□□□□ -1.58
CKS1	YBR135W	ADE16	P54113	591 aa	Known RBP	5.21	□□□□□ -1.58
CKS1	YBR135W	YAT1	P80235	687 aa		5.21	□□□□□ -1.58
CKS1	YBR135W	YSA1	Q01976	231 aa		5.21	□□□□□ -1.58
CKS1	YBR135W	RAD34	Q06665	692 aa		5.21	□□□□□ -1.58
CKS1	YBR135W	ENT4	Q07872	247 aa		5.21	□□□□□ -1.58
CKS1	YBR135W	RTP1	Q12751	981 aa		5.21	□□□□□ -1.58
CKS1	YBR135W	YOR019W	Q99248	730 aa		5.21	□□□□□ -1.58
CKS1	YBR135W	GDB1	Q06625	1536 aa		5.21	□□□□□ -1.58
CKS1	YBR135W	PDR10	P51533	1564 aa		5.21	□□□□□ -1.58
CKS1	YBR135W	BUD3	P25558	1636 aa		5.2	□□□□□ -1.58
CKS1	YBR135W	NUP157	P40064	1391 aa	Known RBP	5.2	□□□□□ -1.58
CKS1	YBR135W	GSY2	P27472	705 aa		5.2	□□□□□ -1.58
CKS1	YBR135W	ESL2	P36168	1195 aa		5.2	□□□□□ -1.58
CKS1	YBR135W	SLZ1	P40167	298 aa		5.2	□□□□□ -1.58
CKS1	YBR135W	PIL1	P53252	339 aa	Known RBP	5.2	□□□□□ -1.58
CKS1	YBR135W	INN1	P53901	409 aa		5.2	□□□□□ -1.58
CKS1	YBR135W	MDM1	Q01846	1127 aa		5.2	□□□□□ -1.58
CKS1	YBR135W	MUB1	Q03162	620 aa		5.2	□□□□□ -1.58
CKS1	YBR135W	SWA2	Q06677	668 aa		5.2	□□□□□ -1.58
CKS1	YBR135W	SDH5	Q08230	162 aa		5.2	□□□□□ -1.58
CKS1	YBR135W	RTC1	Q08281	1341 aa		5.2	□□□□□ -1.58
CKS1	YBR135W	SAC6	P32599	642 aa	Known RBP	5.19	□□□□□ -1.58
CKS1	YBR135W	ESL1	P40456	1118 aa		5.19	□□□□□ -1.58
CKS1	YBR135W	IME4	P41833	600 aa		5.19	□□□□□ -1.58
CKS1	YBR135W	SWP82	P43554	623 aa		5.19	□□□□□ -1.58
CKS1	YBR135W	SAE2	P46946	345 aa		5.19	□□□□□ -1.58
CKS1	YBR135W	YJL043W	P47053	257 aa		5.19	□□□□□ -1.58
CKS1	YBR135W	DCP2	P53550	970 aa	Known RBP	5.19	□□□□□ -1.58
CKS1	YBR135W	CRN1	Q06440	651 aa		5.19	□□□□□ -1.58
CKS1	YBR135W	VIP1	Q06685	1146 aa	Known RBP	5.19	□□□□□ -1.58
CKS1	YBR135W	YOR111W	Q99210	232 aa		5.19	□□□□□ -1.58
CKS1	YBR135W	CET1	O13297	549 aa	Predicted RBP	5.18	□□□□□ -1.58
CKS1	YBR135W	ILV2	P07342	687 aa	Known RBP	5.18	□□□□□ -1.58
CKS1	YBR135W	SRP54	P20424	541 aa	Known RBP	5.18	□□□□□ -1.58
CKS1	YBR135W	NTR2	P36118	322 aa	Predicted RBP	5.18	□□□□□ -1.58
CKS1	YBR135W	NDE1	P40215	560 aa		5.18	□□□□□ -1.58
CKS1	YBR135W	DUO1	P53168	247 aa	Known RBP	5.18	□□□□□ -1.58
CKS1	YBR135W	FMP30	Q02883	468 aa		5.18	□□□□□ -1.58
CKS1	YBR135W	FCP1	Q03254	732 aa		5.18	□□□□□ -1.58
CKS1	YBR135W	RAD30	Q04049	632 aa		5.18	□□□□□ -1.58
CKS1	YBR135W	SPN1	Q06505	410 aa	Predicted RBP	5.18	□□□□□ -1.58
CKS1	YBR135W	RIX7	Q07844	837 aa	Known RBP	5.18	□□□□□ -1.58
CKS1	YBR135W	GPN2	Q08726	347 aa	Predicted RBP	5.18	□□□□□ -1.58
CKS1	YBR135W	LEA1	Q08963	238 aa	Predicted RBP	5.18	□□□□□ -1.58
CKS1	YBR135W	PTC6	P25646	442 aa		5.17	□□□□□ -1.58
CKS1	YBR135W	CDC15	P27636	974 aa		5.17	□□□□□ -1.58
CKS1	YBR135W	GSH1	P32477	678 aa		5.17	□□□□□ -1.58
CKS1	YBR135W	AAP1	P37898	856 aa	Known RBP	5.17	□□□□□ -1.58
CKS1	YBR135W	KTR3	P38130	404 aa	Predicted RBP	5.17	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 21.3 ms