RNA–Protein interactions for RNA: YPR049C

ATG11, Transcript of Adapter protein for pexophagy and the Cvt targeting pathway, yeastyeast

Gene ATG11, Length 3,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG11YPR049C SUR7P54003 302 aa2.28□□□□□ -2.04
ATG11YPR049C GAD1Q04792 585 aa2.28□□□□□ -2.04
ATG11YPR049C STP4Q07351 490 aa2.28□□□□□ -2.04
ATG11YPR049C YOL073CQ08232 322 aa2.28□□□□□ -2.04
ATG11YPR049C NDD1Q08887 554 aa2.28□□□□□ -2.04
ATG11YPR049C TMS1Q12116 473 aa2.28□□□□□ -2.04
ATG11YPR049C COX11P19516 300 aaKnown RBP2.28□□□□□ -2.05
ATG11YPR049C SAT4P25333 603 aaKnown RBP2.28□□□□□ -2.05
ATG11YPR049C URA1P28272 314 aaPredicted RBP2.28□□□□□ -2.05
ATG11YPR049C RPD3P32561 433 aa2.28□□□□□ -2.05
ATG11YPR049C STE13P33894 931 aa2.28□□□□□ -2.05
ATG11YPR049C STO1P34160 861 aaKnown RBP2.28□□□□□ -2.05
ATG11YPR049C LRG1P35688 1017 aa2.28□□□□□ -2.05
ATG11YPR049C SHM2P37291 469 aaKnown RBP2.28□□□□□ -2.05
ATG11YPR049C YHR078WP38799 552 aa2.28□□□□□ -2.05
ATG11YPR049C GCN5Q03330 439 aa2.28□□□□□ -2.05
ATG11YPR049C ZPS1Q12512 249 aa2.28□□□□□ -2.05
ATG11YPR049C VBA3P25594 458 aa2.27□□□□□ -2.05
ATG11YPR049C FMP45Q07651 309 aa2.27□□□□□ -2.05
ATG11YPR049C YOR387CQ08910 206 aa2.27□□□□□ -2.05
ATG11YPR049C MSL5Q12186 476 aaKnown RBP RIP-Chip data2.27□□□□□ -2.05not detected
ATG11YPR049C SKM1Q12469 655 aa2.27□□□□□ -2.05
ATG11YPR049C CDC42P19073 191 aa2.27□□□□□ -2.05
ATG11YPR049C SEC62P21825 274 aa2.27□□□□□ -2.05
ATG11YPR049C SEF1P34228 1148 aa2.27□□□□□ -2.05
ATG11YPR049C CCT6P39079 546 aa2.27□□□□□ -2.05
ATG11YPR049C PLB1P39105 664 aa2.27□□□□□ -2.05
ATG11YPR049C MNN1P39106 762 aa2.27□□□□□ -2.05
ATG11YPR049C RSP5P39940 809 aaKnown RBP2.27□□□□□ -2.05
ATG11YPR049C SGF73P53165 657 aa2.27□□□□□ -2.05
ATG11YPR049C BNI5P53890 448 aaKnown RBP2.27□□□□□ -2.05
ATG11YPR049C YLR224WQ05947 369 aa2.27□□□□□ -2.05
ATG11YPR049C CSR1Q06705 408 aaKnown RBP2.27□□□□□ -2.05
ATG11YPR049C NAG1Q8TGN9 163 aa2.27□□□□□ -2.05
ATG11YPR049C MSF1P08425 469 aa2.26□□□□□ -2.05
ATG11YPR049C RPL4AP10664 362 aaKnown RBP2.26□□□□□ -2.05
ATG11YPR049C PYC1P11154 1178 aaKnown RBP2.26□□□□□ -2.05
ATG11YPR049C SEC63P14906 663 aa2.26□□□□□ -2.05
ATG11YPR049C IME1P21190 360 aa2.26□□□□□ -2.05
ATG11YPR049C SCL1P21243 252 aaKnown RBP2.26□□□□□ -2.05
ATG11YPR049C MRP4P32902 394 aa2.26□□□□□ -2.05
ATG11YPR049C APM3P38153 483 aa2.26□□□□□ -2.05
ATG11YPR049C MED6P38782 295 aa2.26□□□□□ -2.05
ATG11YPR049C MEF2P39677 819 aa2.26□□□□□ -2.05
ATG11YPR049C RPL4BP49626 362 aaKnown RBP2.26□□□□□ -2.05
ATG11YPR049C ADY4Q05955 493 aa2.26□□□□□ -2.05
ATG11YPR049C RCL1Q08096 367 aaPredicted RBP2.26□□□□□ -2.05
ATG11YPR049C ILV1P00927 576 aaKnown RBP2.26□□□□□ -2.05
ATG11YPR049C RPC82P32349 654 aa2.26□□□□□ -2.05
ATG11YPR049C PRP19P32523 503 aaKnown RBP2.26□□□□□ -2.05
ATG11YPR049C PBP2P38151 413 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05not detected
ATG11YPR049C FUI1P38196 639 aa2.26□□□□□ -2.05
ATG11YPR049C CTM1P38818 585 aa2.26□□□□□ -2.05
ATG11YPR049C PEX7P39108 375 aa2.26□□□□□ -2.05
ATG11YPR049C VTC2P43585 828 aa2.26□□□□□ -2.05
ATG11YPR049C TAD1P53065 400 aa2.26□□□□□ -2.05
ATG11YPR049C TFB2Q02939 513 aa2.26□□□□□ -2.05
ATG11YPR049C YML096WQ04489 525 aa2.26□□□□□ -2.05
ATG11YPR049C CDD1Q06549 142 aa2.26□□□□□ -2.05
ATG11YPR049C HBT1Q07653 1046 aaKnown RBP2.26□□□□□ -2.05
ATG11YPR049C RLP24Q07915 199 aaKnown RBP2.26□□□□□ -2.05
ATG11YPR049C THR4P16120 514 aaKnown RBP2.26□□□□□ -2.05
ATG11YPR049C RPC53P25441 422 aa2.26□□□□□ -2.05
ATG11YPR049C ATG15P25641 520 aa2.26□□□□□ -2.05
ATG11YPR049C BEM1P29366 551 aa2.26□□□□□ -2.05
ATG11YPR049C PEX6P33760 1030 aa2.26□□□□□ -2.05
ATG11YPR049C SAS3P34218 831 aa2.26□□□□□ -2.05
ATG11YPR049C SIP3P38717 1229 aa2.26□□□□□ -2.05
ATG11YPR049C AIM33Q04516 312 aa2.26□□□□□ -2.05
ATG11YPR049C ORM2Q06144 216 aa2.26□□□□□ -2.05
ATG11YPR049C YCG1Q06680 1035 aa2.26□□□□□ -2.05
ATG11YPR049C TGL5Q12043 749 aa2.26□□□□□ -2.05
ATG11YPR049C IPP1P00817 287 aaKnown RBP2.25□□□□□ -2.05
ATG11YPR049C KAR1P11927 433 aa2.25□□□□□ -2.05
ATG11YPR049C RPA135P22138 1203 aaKnown RBP2.25□□□□□ -2.05
ATG11YPR049C SEA4P38164 1038 aa2.25□□□□□ -2.05
ATG11YPR049C REV7P38927 245 aa2.25□□□□□ -2.05
ATG11YPR049C SPG5P42933 373 aa2.25□□□□□ -2.05
ATG11YPR049C EPL1P43572 832 aa2.25□□□□□ -2.05
ATG11YPR049C PRM1P53835 661 aa2.25□□□□□ -2.05
ATG11YPR049C TIP41Q12199 356 aa2.25□□□□□ -2.05
ATG11YPR049C PRP8P33334 2413 aaKnown RBP2.25□□□□□ -2.05
ATG11YPR049C FTR1P40088 404 aa2.25□□□□□ -2.05
ATG11YPR049C YPS6P40583 537 aa2.25□□□□□ -2.05
ATG11YPR049C YMR210WQ03649 449 aa2.25□□□□□ -2.05
ATG11YPR049C RKM5Q12367 367 aa2.25□□□□□ -2.05
ATG11YPR049C PRR1P28708 518 aa2.25□□□□□ -2.05
ATG11YPR049C NPR3P38742 1146 aa2.25□□□□□ -2.05
ATG11YPR049C PCL5P38794 229 aa2.25□□□□□ -2.05
ATG11YPR049C LCB2P40970 561 aa2.25□□□□□ -2.05
ATG11YPR049C YNL092WP53934 400 aa2.25□□□□□ -2.05
ATG11YPR049C DLT1Q04216 342 aa2.25□□□□□ -2.05
ATG11YPR049C RRN11Q04712 507 aa2.25□□□□□ -2.05
ATG11YPR049C AAT2P23542 418 aaKnown RBP2.24□□□□□ -2.05
ATG11YPR049C TSR4P25040 408 aa2.24□□□□□ -2.05
ATG11YPR049C PPZ2P33329 710 aa2.24□□□□□ -2.05
ATG11YPR049C LST4P34239 828 aa2.24□□□□□ -2.05
ATG11YPR049C ERC1P38767 581 aa2.24□□□□□ -2.05
ATG11YPR049C KAP123P40069 1113 aaKnown RBP2.24□□□□□ -2.05
ATG11YPR049C NPA3P47122 385 aa2.24□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 31.4 ms