RNA–Protein interactions for RNA: YOR138C

RUP1, Transcript of Protein that regulates ubiquitination of Rsp5p, yeastyeast

Gene RUP1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUP1YOR138C RPS5P26783 225 aaKnown RBP7.49□□□□□ -1.21
RUP1YOR138C BCK2P33306 851 aa7.49□□□□□ -1.21
RUP1YOR138C YBR138CP38277 524 aa7.49□□□□□ -1.21
RUP1YOR138C KSP1P38691 1029 aaKnown RBP7.49□□□□□ -1.21
RUP1YOR138C PEA2P40091 420 aa7.49□□□□□ -1.21
RUP1YOR138C GUF1P46943 645 aa7.49□□□□□ -1.21
RUP1YOR138C KTR6P54070 446 aa7.49□□□□□ -1.21
RUP1YOR138C CDA1Q06702 301 aa7.49□□□□□ -1.21
RUP1YOR138C AAD4Q07747 329 aa7.49□□□□□ -1.21
RUP1YOR138C YOR342CQ12182 319 aa7.49□□□□□ -1.21
RUP1YOR138C COR1P07256 457 aa7.49□□□□□ -1.21
RUP1YOR138C GLN3P18494 730 aa7.49□□□□□ -1.21
RUP1YOR138C ATP12P22135 325 aa7.49□□□□□ -1.21
RUP1YOR138C NUF2P33895 451 aa7.49□□□□□ -1.21
RUP1YOR138C FES1P38260 290 aa7.49□□□□□ -1.21
RUP1YOR138C CNN1P43618 361 aa7.49□□□□□ -1.21
RUP1YOR138C RPA14P50106 137 aa7.49□□□□□ -1.21
RUP1YOR138C LSM3P57743 89 aaKnown RBP7.49□□□□□ -1.21
RUP1YOR138C CRN1Q06440 651 aa7.49□□□□□ -1.21
RUP1YOR138C ESA1Q08649 445 aa7.49□□□□□ -1.21
RUP1YOR138C ULA1Q12059 462 aa7.49□□□□□ -1.21
RUP1YOR138C VCX1Q99385 411 aa7.49□□□□□ -1.21
RUP1YOR138C NMT1P14743 455 aa7.48□□□□□ -1.21
RUP1YOR138C APE1P14904 514 aa7.48□□□□□ -1.21
RUP1YOR138C YBL029WP38201 376 aa7.48□□□□□ -1.21
RUP1YOR138C RIM11P38615 370 aa7.48□□□□□ -1.21
RUP1YOR138C ARN1P38731 627 aa7.48□□□□□ -1.21
RUP1YOR138C UTP9P38882 575 aaKnown RBP7.48□□□□□ -1.21
RUP1YOR138C SIT1P39980 628 aa7.48□□□□□ -1.21
RUP1YOR138C YER186CP40101 306 aa7.48□□□□□ -1.21
RUP1YOR138C RPS10BP46784 105 aaKnown RBP7.48□□□□□ -1.21
RUP1YOR138C YJL132WP47014 750 aa7.48□□□□□ -1.21
RUP1YOR138C PEX31P53203 462 aa7.48□□□□□ -1.21
RUP1YOR138C PEX8P53248 589 aa7.48□□□□□ -1.21
RUP1YOR138C YNL115CP53925 644 aa7.48□□□□□ -1.21
RUP1YOR138C NHX1Q04121 633 aa7.48□□□□□ -1.21
RUP1YOR138C YEH2Q07950 538 aa7.48□□□□□ -1.21
RUP1YOR138C BUD20Q08004 166 aaPredicted RBP7.48□□□□□ -1.21
RUP1YOR138C RPS10AQ08745 105 aaPredicted RBP7.48□□□□□ -1.21
RUP1YOR138C MUM3Q08750 479 aa7.48□□□□□ -1.21
RUP1YOR138C DDC1Q08949 612 aa7.48□□□□□ -1.21
RUP1YOR138C TRP3P00937 484 aa7.47□□□□□ -1.21
RUP1YOR138C INO1P11986 533 aa7.47□□□□□ -1.21
RUP1YOR138C CCA1P21269 546 aa7.47□□□□□ -1.21
RUP1YOR138C GAC1P28006 793 aa7.47□□□□□ -1.21
RUP1YOR138C SMI1P32566 505 aa7.47□□□□□ -1.21
RUP1YOR138C TFB1P32776 642 aa7.47□□□□□ -1.21
RUP1YOR138C MDJ1P35191 511 aa7.47□□□□□ -1.21
RUP1YOR138C RIM4P38741 713 aa7.47□□□□□ -1.21
RUP1YOR138C SPR3P41901 512 aa7.47□□□□□ -1.21
RUP1YOR138C YNL058CP53947 316 aa7.47□□□□□ -1.21
RUP1YOR138C YKR005CQ02203 525 aa7.47□□□□□ -1.21
RUP1YOR138C RAD30Q04049 632 aa7.47□□□□□ -1.21
RUP1YOR138C SMP3Q04174 516 aa7.47□□□□□ -1.21
RUP1YOR138C GMC2Q06201 188 aa7.47□□□□□ -1.21
RUP1YOR138C HDA3Q06623 655 aa7.47□□□□□ -1.21
RUP1YOR138C LOT6Q07923 191 aa7.47□□□□□ -1.21
RUP1YOR138C RCL1Q08096 367 aaPredicted RBP7.47□□□□□ -1.21
RUP1YOR138C SGT1Q08446 395 aa7.47□□□□□ -1.21
RUP1YOR138C RPN8Q08723 338 aaKnown RBP7.47□□□□□ -1.21
RUP1YOR138C SPB1P25582 841 aaPredicted RBP7.47□□□□□ -1.21
RUP1YOR138C ATP7P30902 174 aa7.47□□□□□ -1.21
RUP1YOR138C MRS6P32864 603 aaKnown RBP7.47□□□□□ -1.21
RUP1YOR138C RPT5P33297 434 aaKnown RBP7.47□□□□□ -1.21
RUP1YOR138C DSF2P38213 736 aa7.47□□□□□ -1.21
RUP1YOR138C KAP104P38217 918 aaKnown RBP7.47□□□□□ -1.21
RUP1YOR138C YHR131CP38835 850 aa7.47□□□□□ -1.21
RUP1YOR138C ECM10P39987 644 aa7.47□□□□□ -1.21
RUP1YOR138C NOP13P53883 403 aaKnown RBP RIP-Chip data7.47□□□□□ -1.21not detected
RUP1YOR138C HSP31Q04432 237 aa7.47□□□□□ -1.21
RUP1YOR138C YCS4Q06156 1176 aa7.47□□□□□ -1.21
RUP1YOR138C YVC1Q12324 675 aa7.47□□□□□ -1.21
RUP1YOR138C UBR2Q07963 1872 aa7.46□□□□□ -1.21
RUP1YOR138C TPK2P06245 380 aa7.46□□□□□ -1.22
RUP1YOR138C MIS1P09440 975 aaKnown RBP7.46□□□□□ -1.22
RUP1YOR138C MET16P18408 261 aaPredicted RBP7.46□□□□□ -1.22
RUP1YOR138C RVS161P25343 265 aaKnown RBP7.46□□□□□ -1.22
RUP1YOR138C PTP2P29461 750 aa7.46□□□□□ -1.22
RUP1YOR138C ATO2P32907 282 aa7.46□□□□□ -1.22
RUP1YOR138C MRP8P35719 219 aa7.46□□□□□ -1.22
RUP1YOR138C YEL028WP39989 153 aa7.46□□□□□ -1.22
RUP1YOR138C IAH1P41734 238 aa7.46□□□□□ -1.22
RUP1YOR138C NRD1P53617 575 aaKnown RBP RIP-Chip data7.46□□□□□ -1.22 RIP-Chip
RUP1YOR138C MCM21Q06675 368 aa7.46□□□□□ -1.22
RUP1YOR138C CMR1Q12510 522 aaKnown RBP7.46□□□□□ -1.22
RUP1YOR138C MSS18P08593 268 aa7.45□□□□□ -1.22
RUP1YOR138C POX1P13711 748 aa7.45□□□□□ -1.22
RUP1YOR138C PMA2P19657 947 aa7.45□□□□□ -1.22
RUP1YOR138C SSA4P22202 642 aaKnown RBP7.45□□□□□ -1.22
RUP1YOR138C BEM1P29366 551 aa7.45□□□□□ -1.22
RUP1YOR138C BEM3P32873 1128 aa7.45□□□□□ -1.22
RUP1YOR138C BRL1P38770 471 aa7.45□□□□□ -1.22
RUP1YOR138C XDJ1P39102 459 aa7.45□□□□□ -1.22
RUP1YOR138C RIC1P40395 1056 aa7.45□□□□□ -1.22
RUP1YOR138C TIM13P53299 105 aa7.45□□□□□ -1.22
RUP1YOR138C NOP19P53317 196 aaPredicted RBP7.45□□□□□ -1.22
RUP1YOR138C YNL033WP53964 284 aa7.45□□□□□ -1.22
RUP1YOR138C YNL019CP53975 284 aa7.45□□□□□ -1.22
RUP1YOR138C RLI1Q03195 608 aaKnown RBP7.45□□□□□ -1.22
RUP1YOR138C TIF35Q04067 274 aaKnown RBP7.45□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms