RNA–Protein interactions for RNA: YMR039C

SUB1, Transcript of Transcriptional coactivator, yeastyeast

Gene SUB1, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB1YMR039C TAM41P53230 385 aa4.03□□□□□ -1.76
SUB1YMR039C MTG1Q03151 367 aaPredicted RBP4.03□□□□□ -1.76
SUB1YMR039C ATG23Q06671 453 aa4.03□□□□□ -1.76
SUB1YMR039C MCH4Q08268 501 aa4.03□□□□□ -1.76
SUB1YMR039C YCR043CP25361 127 aa4.02□□□□□ -1.77
SUB1YMR039C GCS1P35197 352 aa4.02□□□□□ -1.77
SUB1YMR039C ARC40P38328 384 aaKnown RBP4.02□□□□□ -1.77
SUB1YMR039C TES1P41903 349 aaKnown RBP4.02□□□□□ -1.77
SUB1YMR039C SKP2P42843 763 aa4.02□□□□□ -1.77
SUB1YMR039C UBP8P50102 471 aa4.02□□□□□ -1.77
SUB1YMR039C MOT3P54785 490 aaKnown RBP4.02□□□□□ -1.77
SUB1YMR039C CAC2Q04199 468 aa4.02□□□□□ -1.77
SUB1YMR039C MSS18P08593 268 aa4.01□□□□□ -1.77
SUB1YMR039C MIS1P09440 975 aaKnown RBP4.01□□□□□ -1.77
SUB1YMR039C YFL068WP0CX99 160 aa4.01□□□□□ -1.77
SUB1YMR039C YLL066W-AP0CY00 160 aa4.01□□□□□ -1.77
SUB1YMR039C YLL067W-AP0CY01 160 aa4.01□□□□□ -1.77
SUB1YMR039C SWI4P25302 1093 aaKnown RBP4.01□□□□□ -1.77
SUB1YMR039C ARP2P32381 391 aaKnown RBP4.01□□□□□ -1.77
SUB1YMR039C FSH1P38777 243 aaKnown RBP4.01□□□□□ -1.77
SUB1YMR039C SWF1Q04629 336 aa4.01□□□□□ -1.77
SUB1YMR039C GAL1P04385 528 aa4□□□□□ -1.77
SUB1YMR039C MRP2P10663 115 aaPredicted RBP4□□□□□ -1.77
SUB1YMR039C PCT1P13259 424 aa4□□□□□ -1.77
SUB1YMR039C LRE1P25579 583 aaKnown RBP4□□□□□ -1.77
SUB1YMR039C GCD7P32502 381 aaPredicted RBP4□□□□□ -1.77
SUB1YMR039C RGT1P32862 1170 aa4□□□□□ -1.77
SUB1YMR039C YAT2P40017 923 aa4□□□□□ -1.77
SUB1YMR039C HIS6P40545 261 aa4□□□□□ -1.77
SUB1YMR039C VPS25P47142 202 aa4□□□□□ -1.77
SUB1YMR039C YMR034CQ05131 434 aaPredicted RBP4□□□□□ -1.77
SUB1YMR039C GRS2Q06817 618 aa4□□□□□ -1.77
SUB1YMR039C NYV1Q12255 253 aa4□□□□□ -1.77
SUB1YMR039C PTP2P29461 750 aa3.99□□□□□ -1.77
SUB1YMR039C SPC72P39723 622 aa3.99□□□□□ -1.77
SUB1YMR039C PCL6P40038 420 aa3.99□□□□□ -1.77
SUB1YMR039C ASG1P40467 964 aa3.99□□□□□ -1.77
SUB1YMR039C ADE16P54113 591 aaKnown RBP3.99□□□□□ -1.77
SUB1YMR039C NDD1Q08887 554 aa3.99□□□□□ -1.77
SUB1YMR039C GPA1P08539 472 aa3.98□□□□□ -1.77
SUB1YMR039C SUI3P09064 285 aaKnown RBP3.98□□□□□ -1.77
SUB1YMR039C YML003WP0CF16 290 aa3.98□□□□□ -1.77
SUB1YMR039C YCR006CP25350 157 aa3.98□□□□□ -1.77
SUB1YMR039C MSH1P25846 959 aa3.98□□□□□ -1.77
SUB1YMR039C MET30P39014 640 aa3.98□□□□□ -1.77
SUB1YMR039C MAF1P41910 395 aa3.98□□□□□ -1.77
SUB1YMR039C YGL036WP53185 909 aaPredicted RBP3.98□□□□□ -1.77
SUB1YMR039C YLR281CQ05863 155 aa3.98□□□□□ -1.77
SUB1YMR039C ATP4P05626 244 aa3.97□□□□□ -1.77
SUB1YMR039C RPL42AP0CX27 106 aaKnown RBP3.97□□□□□ -1.77
SUB1YMR039C RPL42BP0CX28 106 aaKnown RBP3.97□□□□□ -1.77
SUB1YMR039C YSP3P25036 478 aa3.97□□□□□ -1.77
SUB1YMR039C RFA2P26754 273 aaKnown RBP3.97□□□□□ -1.77
SUB1YMR039C VPS27P40343 622 aaKnown RBP3.97□□□□□ -1.77
SUB1YMR039C YIL169CP40442 995 aa3.97□□□□□ -1.77
SUB1YMR039C ZAP1P47043 880 aa3.97□□□□□ -1.77
SUB1YMR039C RTS3P53289 263 aa3.97□□□□□ -1.77
SUB1YMR039C ECI1Q05871 280 aa3.97□□□□□ -1.77
SUB1YMR039C YLR455WQ06188 304 aa3.97□□□□□ -1.77
SUB1YMR039C HIM1Q06674 414 aa3.97□□□□□ -1.77
SUB1YMR039C FRE3Q08905 711 aa3.97□□□□□ -1.77
SUB1YMR039C YOR111WQ99210 232 aa3.97□□□□□ -1.77
SUB1YMR039C YEF3P16521 1044 aaKnown RBP3.96□□□□□ -1.78
SUB1YMR039C MNN2P38069 597 aa3.96□□□□□ -1.78
SUB1YMR039C DCP2P53550 970 aaKnown RBP3.96□□□□□ -1.78
SUB1YMR039C BET4Q00618 327 aa3.96□□□□□ -1.78
SUB1YMR039C TRS130Q03660 1102 aa3.96□□□□□ -1.78
SUB1YMR039C ARP9Q05123 467 aa3.96□□□□□ -1.78
SUB1YMR039C POS5Q06892 414 aa3.96□□□□□ -1.78
SUB1YMR039C VAM6Q07468 1049 aa3.96□□□□□ -1.78
SUB1YMR039C YLR112WQ12130 139 aa3.96□□□□□ -1.78
SUB1YMR039C RRP6Q12149 733 aaKnown RBP3.96□□□□□ -1.78
SUB1YMR039C GEX2P36173 615 aa3.95□□□□□ -1.78
SUB1YMR039C RKM3P38222 552 aa3.95□□□□□ -1.78
SUB1YMR039C EXO84P38261 753 aa3.95□□□□□ -1.78
SUB1YMR039C YBR138CP38277 524 aa3.95□□□□□ -1.78
SUB1YMR039C PUG1P40100 303 aa3.95□□□□□ -1.78
SUB1YMR039C ERR3P42222 437 aa3.95□□□□□ -1.78
SUB1YMR039C ECM16Q04217 1267 aaKnown RBP3.95□□□□□ -1.78
SUB1YMR039C SWT1Q12104 458 aa3.95□□□□□ -1.78
SUB1YMR039C YLR049CQ12110 428 aa3.95□□□□□ -1.78
SUB1YMR039C SPO16P17122 198 aa3.94□□□□□ -1.78
SUB1YMR039C CLB4P24871 460 aa3.94□□□□□ -1.78
SUB1YMR039C YHL041WP38730 149 aa3.94□□□□□ -1.78
SUB1YMR039C RTT107P38850 1070 aa3.94□□□□□ -1.78
SUB1YMR039C CCT4P39078 528 aaKnown RBP3.94□□□□□ -1.78
SUB1YMR039C FAF1P40546 346 aaPredicted RBP3.94□□□□□ -1.78
SUB1YMR039C YJR008WP47085 338 aa3.94□□□□□ -1.78
SUB1YMR039C DIG1Q03063 452 aaKnown RBP3.94□□□□□ -1.78
SUB1YMR039C IZH1Q03419 316 aa3.94□□□□□ -1.78
SUB1YMR039C STP3Q05937 343 aa3.94□□□□□ -1.78
SUB1YMR039C GPN2Q08726 347 aaPredicted RBP3.94□□□□□ -1.78
SUB1YMR039C YER145C-AA0A023PYF4 145 aa3.93□□□□□ -1.78
SUB1YMR039C NUP120P35729 1037 aa3.93□□□□□ -1.78
SUB1YMR039C YIL161WP40449 235 aaKnown RBP3.93□□□□□ -1.78
SUB1YMR039C PAP2P53632 584 aaKnown RBP3.93□□□□□ -1.78
SUB1YMR039C SWA2Q06677 668 aa3.93□□□□□ -1.78
SUB1YMR039C NRT1Q08485 598 aa3.93□□□□□ -1.78
SUB1YMR039C SRP54P20424 541 aaKnown RBP3.92□□□□□ -1.78
SUB1YMR039C STE50P25344 346 aa3.92□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms