RNA–Protein interactions for RNA: YML029W

USA1, Transcript of Scaffold subunit of the Hrd1p ubiquitin ligase, yeastyeast

Gene USA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USA1YML029W TFB4Q12004 338 aa3.94□□□□□ -1.78
USA1YML029W AI5_ALPHAQ9ZZX1 630 aa3.94□□□□□ -1.78
USA1YML029W RPB2P08518 1224 aaKnown RBP3.94□□□□□ -1.78
USA1YML029W GPA2P10823 449 aa3.94□□□□□ -1.78
USA1YML029W SST2P11972 698 aaKnown RBP3.94□□□□□ -1.78
USA1YML029W PHO84P25297 587 aaKnown RBP3.94□□□□□ -1.78
USA1YML029W MGT1P26188 188 aa3.94□□□□□ -1.78
USA1YML029W TPS2P31688 896 aaKnown RBP3.94□□□□□ -1.78
USA1YML029W NDI1P32340 513 aa3.94□□□□□ -1.78
USA1YML029W BEM3P32873 1128 aa3.94□□□□□ -1.78
USA1YML029W MAK5P38112 773 aaPredicted RBP3.94□□□□□ -1.78
USA1YML029W YSW1P38280 609 aa3.94□□□□□ -1.78
USA1YML029W MGE1P38523 228 aa3.94□□□□□ -1.78
USA1YML029W SAP1P39955 897 aaKnown RBP3.94□□□□□ -1.78
USA1YML029W AIM23P47015 356 aa3.94□□□□□ -1.78
USA1YML029W PEX8P53248 589 aa3.94□□□□□ -1.78
USA1YML029W BIO5P53744 561 aaKnown RBP3.94□□□□□ -1.78
USA1YML029W SIW14P53965 281 aa3.94□□□□□ -1.78
USA1YML029W PPN1Q04119 674 aa3.94□□□□□ -1.78
USA1YML029W YMR027WQ04371 470 aa3.94□□□□□ -1.78
USA1YML029W BLS1Q06071 122 aa3.94□□□□□ -1.78
USA1YML029W FRA1Q07825 749 aa3.94□□□□□ -1.78
USA1YML029W PIN2Q12057 282 aa3.94□□□□□ -1.78
USA1YML029W MCD1Q12158 566 aa3.94□□□□□ -1.78
USA1YML029W AFI1Q99222 893 aa3.94□□□□□ -1.78
USA1YML029W MEX67Q99257 599 aaKnown RBP3.94□□□□□ -1.78
USA1YML029W RPS14AP06367 137 aaKnown RBP3.93□□□□□ -1.78
USA1YML029W CMD1P06787 147 aaKnown RBP3.93□□□□□ -1.78
USA1YML029W ERR1P0CX10 437 aa3.93□□□□□ -1.78
USA1YML029W ERR2P0CX11 437 aa3.93□□□□□ -1.78
USA1YML029W INO1P11986 533 aa3.93□□□□□ -1.78
USA1YML029W HEM15P16622 393 aa3.93□□□□□ -1.78
USA1YML029W HCM1P25364 564 aa3.93□□□□□ -1.78
USA1YML029W STE13P33894 931 aa3.93□□□□□ -1.78
USA1YML029W SPT23P35210 1082 aa3.93□□□□□ -1.78
USA1YML029W STB6P36085 766 aa3.93□□□□□ -1.78
USA1YML029W TAT2P38967 592 aa3.93□□□□□ -1.78
USA1YML029W CCT6P39079 546 aa3.93□□□□□ -1.78
USA1YML029W CIN4P39110 191 aa3.93□□□□□ -1.78
USA1YML029W RPS14BP39516 138 aaKnown RBP3.93□□□□□ -1.78
USA1YML029W SMX2P40204 77 aaKnown RBP3.93□□□□□ -1.78
USA1YML029W UBP7P40453 1071 aa3.93□□□□□ -1.78
USA1YML029W ERR3P42222 437 aa3.93□□□□□ -1.78
USA1YML029W EMW1P42842 904 aaKnown RBP3.93□□□□□ -1.78
USA1YML029W YNL144CP53907 740 aa3.93□□□□□ -1.78
USA1YML029W TEP1P53916 434 aa3.93□□□□□ -1.78
USA1YML029W YNL035CP53962 389 aaKnown RBP3.93□□□□□ -1.78
USA1YML029W YPR114WQ06107 315 aa3.93□□□□□ -1.78
USA1YML029W SFH1Q06168 426 aa3.93□□□□□ -1.78
USA1YML029W RUD3Q12234 484 aaKnown RBP3.93□□□□□ -1.78
USA1YML029W PEX11Q12462 236 aa3.93□□□□□ -1.78
USA1YML029W ARG4P04076 463 aaPredicted RBP3.93□□□□□ -1.78
USA1YML029W SCH9P11792 824 aaKnown RBP3.93□□□□□ -1.78
USA1YML029W APA1P16550 321 aaKnown RBP3.93□□□□□ -1.78
USA1YML029W SIR1P21691 654 aa3.93□□□□□ -1.78
USA1YML029W MRPL25P23369 157 aa3.93□□□□□ -1.78
USA1YML029W KES1P35844 434 aaKnown RBP3.93□□□□□ -1.78
USA1YML029W RRP14P36080 434 aaKnown RBP3.93□□□□□ -1.78
USA1YML029W HXT5P38695 592 aa3.93□□□□□ -1.78
USA1YML029W CCT2P39076 527 aaKnown RBP3.93□□□□□ -1.78
USA1YML029W YJR061WP40355 935 aa3.93□□□□□ -1.78
USA1YML029W ERG10P41338 398 aaKnown RBP3.93□□□□□ -1.78
USA1YML029W CTK3P46963 296 aaPredicted RBP3.93□□□□□ -1.78
USA1YML029W YGR127WP53275 312 aa3.93□□□□□ -1.78
USA1YML029W YNL143CP53908 130 aa3.93□□□□□ -1.78
USA1YML029W NMA111P53920 997 aa3.93□□□□□ -1.78
USA1YML029W KTR5P53966 522 aaPredicted RBP3.93□□□□□ -1.78
USA1YML029W ARP9Q05123 467 aa3.93□□□□□ -1.78
USA1YML029W PUN1Q06991 263 aa3.93□□□□□ -1.78
USA1YML029W HBT1Q07653 1046 aaKnown RBP3.93□□□□□ -1.78
USA1YML029W YOR387CQ08910 206 aa3.93□□□□□ -1.78
USA1YML029W YLR046CQ12253 270 aa3.93□□□□□ -1.78
USA1YML029W SEM1O94742 89 aa3.92□□□□□ -1.78
USA1YML029W ILS1P09436 1072 aaKnown RBP3.92□□□□□ -1.78
USA1YML029W CHL1P22516 861 aaPredicted RBP3.92□□□□□ -1.78
USA1YML029W AMS1P22855 1083 aa3.92□□□□□ -1.78
USA1YML029W YSP3P25036 478 aa3.92□□□□□ -1.78
USA1YML029W URA7P28274 579 aaKnown RBP3.92□□□□□ -1.78
USA1YML029W URA10P30402 227 aa3.92□□□□□ -1.78
USA1YML029W AIM26P32858 118 aa3.92□□□□□ -1.78
USA1YML029W SMF2P38778 549 aa3.92□□□□□ -1.78
USA1YML029W URB2P47108 1174 aa3.92□□□□□ -1.78
USA1YML029W YJR124CP47159 448 aa3.92□□□□□ -1.78
USA1YML029W SPC105P53148 917 aa3.92□□□□□ -1.78
USA1YML029W YNR063WP53749 607 aa3.92□□□□□ -1.78
USA1YML029W TFB2Q02939 513 aa3.92□□□□□ -1.78
USA1YML029W YHM2Q04013 314 aa3.92□□□□□ -1.78
USA1YML029W RSC2Q06488 889 aa3.92□□□□□ -1.78
USA1YML029W MCP2Q06567 569 aa3.92□□□□□ -1.78
USA1YML029W CBC2Q08920 208 aaKnown RBP RIP-Chip data3.92□□□□□ -1.78not detected
USA1YML029W YOR223WQ12015 292 aa3.92□□□□□ -1.78
USA1YML029W PHO4P07270 312 aaKnown RBP3.92□□□□□ -1.78
USA1YML029W ACO1P19414 778 aaKnown RBP RIP-Chip data3.92□□□□□ -1.78not detected
USA1YML029W GEX1P25596 615 aa3.92□□□□□ -1.78
USA1YML029W ILV6P25605 309 aaKnown RBP3.92□□□□□ -1.78
USA1YML029W YKL097CP34245 136 aa3.92□□□□□ -1.78
USA1YML029W GEX2P36173 615 aa3.92□□□□□ -1.78
USA1YML029W ATM1P40416 690 aa3.92□□□□□ -1.78
USA1YML029W YFR018CP43599 363 aa3.92□□□□□ -1.78
USA1YML029W DAN4P47179 1161 aa3.92□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms