RNA–Protein interactions for RNA: YLR147C

SMD3, Transcript of Core Sm protein Sm D3, yeastyeast

Gene SMD3, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD3YLR147C UBX4P54730 416 aa4.34□□□□□ -1.71
SMD3YLR147C PDR8Q06149 701 aa4.34□□□□□ -1.71
SMD3YLR147C ATG23Q06671 453 aa4.34□□□□□ -1.71
SMD3YLR147C RRI1Q12468 440 aa4.34□□□□□ -1.71
SMD3YLR147C PHO81P17442 1178 aa4.33□□□□□ -1.72
SMD3YLR147C GCD7P32502 381 aaPredicted RBP4.33□□□□□ -1.72
SMD3YLR147C VPS41P38959 992 aa4.33□□□□□ -1.72
SMD3YLR147C TPA1P40032 644 aaKnown RBP4.33□□□□□ -1.72
SMD3YLR147C DJP1P40564 432 aa4.33□□□□□ -1.72
SMD3YLR147C ARC35P53731 342 aaKnown RBP4.33□□□□□ -1.72
SMD3YLR147C EAF7P53911 425 aaKnown RBP4.33□□□□□ -1.72
SMD3YLR147C VTC3Q02725 835 aa4.33□□□□□ -1.72
SMD3YLR147C MRPL1Q04599 285 aa4.33□□□□□ -1.72
SMD3YLR147C ATX2Q12067 313 aa4.33□□□□□ -1.72
SMD3YLR147C MSM1P22438 575 aa4.32□□□□□ -1.72
SMD3YLR147C LRE1P25579 583 aaKnown RBP4.32□□□□□ -1.72
SMD3YLR147C MSS51P32335 436 aa4.32□□□□□ -1.72
SMD3YLR147C OCT1P35999 772 aa4.32□□□□□ -1.72
SMD3YLR147C ERR3P42222 437 aa4.32□□□□□ -1.72
SMD3YLR147C PIG1Q06216 648 aa4.32□□□□□ -1.72
SMD3YLR147C PGI1P12709 554 aaKnown RBP4.31□□□□□ -1.72
SMD3YLR147C YCL049CP25577 312 aa4.31□□□□□ -1.72
SMD3YLR147C GND1P38720 489 aaKnown RBP4.31□□□□□ -1.72
SMD3YLR147C LYS20P48570 428 aaKnown RBP4.31□□□□□ -1.72
SMD3YLR147C ECM22Q05958 814 aaPredicted RBP4.31□□□□□ -1.72
SMD3YLR147C PXL1P36166 706 aa4.3□□□□□ -1.72
SMD3YLR147C MDV1P47025 714 aa4.3□□□□□ -1.72
SMD3YLR147C CSL4P53859 292 aaPredicted RBP4.3□□□□□ -1.72
SMD3YLR147C SWT1Q12104 458 aa4.3□□□□□ -1.72
SMD3YLR147C PCD1Q12524 340 aa4.3□□□□□ -1.72
SMD3YLR147C NPR3P38742 1146 aa4.29□□□□□ -1.72
SMD3YLR147C FAF1P40546 346 aaPredicted RBP4.29□□□□□ -1.72
SMD3YLR147C YPT11P48559 417 aa4.29□□□□□ -1.72
SMD3YLR147C TFC6Q06339 672 aa4.29□□□□□ -1.72
SMD3YLR147C MCH4Q08268 501 aa4.29□□□□□ -1.72
SMD3YLR147C PUF2Q12221 1075 aaKnown RBP RIP-Chip data4.29□□□□□ -1.72not detected
SMD3YLR147C YER145C-AA0A023PYF4 145 aa4.28□□□□□ -1.72
SMD3YLR147C ATP2P00830 511 aaKnown RBP4.28□□□□□ -1.72
SMD3YLR147C GPA1P08539 472 aa4.28□□□□□ -1.72
SMD3YLR147C MTF2P10849 440 aa4.28□□□□□ -1.72
SMD3YLR147C SRP54P20424 541 aaKnown RBP4.28□□□□□ -1.72
SMD3YLR147C YCR006CP25350 157 aa4.28□□□□□ -1.72
SMD3YLR147C PSF2P40359 213 aa4.28□□□□□ -1.72
SMD3YLR147C YIL152WP40455 235 aa4.28□□□□□ -1.72
SMD3YLR147C YJR008WP47085 338 aa4.28□□□□□ -1.72
SMD3YLR147C FRE3Q08905 711 aa4.28□□□□□ -1.72
SMD3YLR147C UBX3Q12229 455 aa4.28□□□□□ -1.72
SMD3YLR147C COX17Q12287 69 aa4.28□□□□□ -1.72
SMD3YLR147C NUC1P08466 329 aa4.27□□□□□ -1.73
SMD3YLR147C SUI3P09064 285 aaKnown RBP4.27□□□□□ -1.73
SMD3YLR147C UBC1P21734 215 aaKnown RBP4.27□□□□□ -1.73
SMD3YLR147C DBF20P32328 564 aa4.27□□□□□ -1.73
SMD3YLR147C ATO2P32907 282 aa4.27□□□□□ -1.73
SMD3YLR147C ADE17P38009 592 aaKnown RBP4.27□□□□□ -1.73
SMD3YLR147C SCO2P38072 301 aa4.27□□□□□ -1.73
SMD3YLR147C UBP13P38187 747 aa4.27□□□□□ -1.73
SMD3YLR147C YIL161WP40449 235 aaKnown RBP4.27□□□□□ -1.73
SMD3YLR147C ASG1P40467 964 aa4.27□□□□□ -1.73
SMD3YLR147C YIR016WP40572 265 aa4.27□□□□□ -1.73
SMD3YLR147C YNL144CP53907 740 aa4.27□□□□□ -1.73
SMD3YLR147C MRPL13Q02204 264 aa4.27□□□□□ -1.73
SMD3YLR147C BLS1Q06071 122 aa4.27□□□□□ -1.73
SMD3YLR147C YLR455WQ06188 304 aa4.27□□□□□ -1.73
SMD3YLR147C MRP2P10663 115 aaPredicted RBP4.26□□□□□ -1.73
SMD3YLR147C SPO16P17122 198 aa4.26□□□□□ -1.73
SMD3YLR147C NUP120P35729 1037 aa4.26□□□□□ -1.73
SMD3YLR147C IFA38P38286 347 aa4.26□□□□□ -1.73
SMD3YLR147C TPM2P40414 161 aa4.26□□□□□ -1.73
SMD3YLR147C YGL036WP53185 909 aaPredicted RBP4.26□□□□□ -1.73
SMD3YLR147C DCP2P53550 970 aaKnown RBP4.26□□□□□ -1.73
SMD3YLR147C CAC2Q04199 468 aa4.26□□□□□ -1.73
SMD3YLR147C TDA9Q04545 1251 aa4.26□□□□□ -1.73
SMD3YLR147C SWA2Q06677 668 aa4.26□□□□□ -1.73
SMD3YLR147C SNA4Q07549 140 aa4.26□□□□□ -1.73
SMD3YLR147C GSH2Q08220 491 aa4.26□□□□□ -1.73
SMD3YLR147C SRL1Q08673 210 aa4.26□□□□□ -1.73
SMD3YLR147C CHO1P08456 276 aa4.25□□□□□ -1.73
SMD3YLR147C TY2A-LR1P0C2J4 438 aa4.25□□□□□ -1.73
SMD3YLR147C TY2A-FP0CX61 438 aa4.25□□□□□ -1.73
SMD3YLR147C TY2A-GR2P0CX62 438 aa4.25□□□□□ -1.73
SMD3YLR147C YFL068WP0CX99 160 aa4.25□□□□□ -1.73
SMD3YLR147C YLL066W-AP0CY00 160 aa4.25□□□□□ -1.73
SMD3YLR147C YLL067W-AP0CY01 160 aa4.25□□□□□ -1.73
SMD3YLR147C TY2A-CP25383 438 aa4.25□□□□□ -1.73
SMD3YLR147C TY2A-DR2Q03483 438 aa4.25□□□□□ -1.73
SMD3YLR147C IOC4Q04213 475 aa4.25□□□□□ -1.73
SMD3YLR147C SWF1Q04629 336 aa4.25□□□□□ -1.73
SMD3YLR147C YLR112WQ12130 139 aa4.25□□□□□ -1.73
SMD3YLR147C TY2A-BQ12260 438 aa4.25□□□□□ -1.73
SMD3YLR147C TY2A-OR2Q12293 438 aa4.25□□□□□ -1.73
SMD3YLR147C TY2A-DR1Q12392 438 aa4.25□□□□□ -1.73
SMD3YLR147C TY2A-OR1Q12439 438 aa4.25□□□□□ -1.73
SMD3YLR147C TY2A-DR3Q99303 438 aa4.25□□□□□ -1.73
SMD3YLR147C RPL42AP0CX27 106 aaKnown RBP4.24□□□□□ -1.73
SMD3YLR147C RPL42BP0CX28 106 aaKnown RBP4.24□□□□□ -1.73
SMD3YLR147C YUR1P26725 428 aa4.24□□□□□ -1.73
SMD3YLR147C MRPL36P36531 177 aa4.24□□□□□ -1.73
SMD3YLR147C SWP82P43554 623 aa4.24□□□□□ -1.73
SMD3YLR147C UBP8P50102 471 aa4.24□□□□□ -1.73
SMD3YLR147C COG1P53079 417 aa4.24□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms