RNA–Protein interactions for RNA: YKL130C

SHE2, Transcript of RNA-binding protein that binds specific mRNAs and interacts with She3p, yeastyeast

Gene SHE2, Length 741 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE2YKL130C ACS1Q01574 713 aa2.54□□□□□ -2
SHE2YKL130C VPS64Q03944 604 aa2.54□□□□□ -2
SHE2YKL130C VID22Q05934 901 aa2.54□□□□□ -2
SHE2YKL130C ENT1Q12518 454 aa2.54□□□□□ -2
SHE2YKL130C SNF1P06782 633 aaKnown RBP2.53□□□□□ -2
SHE2YKL130C ADE3P07245 946 aaKnown RBP2.53□□□□□ -2
SHE2YKL130C RIT1P23796 513 aa2.53□□□□□ -2
SHE2YKL130C PRP45P28004 379 aaPredicted RBP2.53□□□□□ -2
SHE2YKL130C SWC3P31376 625 aa2.53□□□□□ -2
SHE2YKL130C DSS4P32601 143 aa2.53□□□□□ -2
SHE2YKL130C TEF4P36008 412 aaKnown RBP2.53□□□□□ -2
SHE2YKL130C YBR138CP38277 524 aa2.53□□□□□ -2
SHE2YKL130C NOP16P40007 231 aaKnown RBP2.53□□□□□ -2
SHE2YKL130C NDE1P40215 560 aa2.53□□□□□ -2
SHE2YKL130C BNA1P47096 177 aa2.53□□□□□ -2
SHE2YKL130C CBK1P53894 756 aa2.53□□□□□ -2
SHE2YKL130C YNL058CP53947 316 aa2.53□□□□□ -2
SHE2YKL130C GIR2Q03768 265 aaPredicted RBP2.53□□□□□ -2
SHE2YKL130C SCW10Q04951 389 aa2.53□□□□□ -2
SHE2YKL130C CRT10Q08226 957 aa2.53□□□□□ -2
SHE2YKL130C CDC31P06704 161 aaKnown RBP2.52□□□□□ -2.01
SHE2YKL130C FUM1P08417 488 aaKnown RBP2.52□□□□□ -2.01
SHE2YKL130C ILS1P09436 1072 aaKnown RBP2.52□□□□□ -2.01
SHE2YKL130C SWI4P25302 1093 aaKnown RBP2.52□□□□□ -2.01
SHE2YKL130C ARP2P32381 391 aaKnown RBP2.52□□□□□ -2.01
SHE2YKL130C GDA1P32621 518 aa2.52□□□□□ -2.01
SHE2YKL130C CNS1P33313 385 aa2.52□□□□□ -2.01
SHE2YKL130C IFA38P38286 347 aa2.52□□□□□ -2.01
SHE2YKL130C FTH1P38310 465 aa2.52□□□□□ -2.01
SHE2YKL130C IMD2P38697 523 aaKnown RBP2.52□□□□□ -2.01
SHE2YKL130C GND1P38720 489 aaKnown RBP2.52□□□□□ -2.01
SHE2YKL130C AXL2P38928 823 aa2.52□□□□□ -2.01
SHE2YKL130C VPS8P39702 1274 aa2.52□□□□□ -2.01
SHE2YKL130C YER010CP40011 234 aa2.52□□□□□ -2.01
SHE2YKL130C POL31P46957 487 aa2.52□□□□□ -2.01
SHE2YKL130C IMD3P50095 523 aaKnown RBP2.52□□□□□ -2.01
SHE2YKL130C YPL108WQ02872 168 aaPredicted RBP2.52□□□□□ -2.01
SHE2YKL130C TRS31Q03337 283 aa2.52□□□□□ -2.01
SHE2YKL130C SPC19Q03954 165 aa2.52□□□□□ -2.01
SHE2YKL130C RAD33Q04231 177 aa2.52□□□□□ -2.01
SHE2YKL130C YTH1Q06102 208 aaPredicted RBP2.52□□□□□ -2.01
SHE2YKL130C TFC6Q06339 672 aa2.52□□□□□ -2.01
SHE2YKL130C GRS2Q06817 618 aa2.52□□□□□ -2.01
SHE2YKL130C YOR389WQ08912 624 aa2.52□□□□□ -2.01
SHE2YKL130C TRM8Q12009 286 aa2.52□□□□□ -2.01
SHE2YKL130C UBX3Q12229 455 aa2.52□□□□□ -2.01
SHE2YKL130C CET1O13297 549 aaPredicted RBP2.51□□□□□ -2.01
SHE2YKL130C SEM1O94742 89 aa2.51□□□□□ -2.01
SHE2YKL130C TPK1P06244 397 aa2.51□□□□□ -2.01
SHE2YKL130C MRP7P12687 371 aa2.51□□□□□ -2.01
SHE2YKL130C GUK1P15454 187 aaKnown RBP2.51□□□□□ -2.01
SHE2YKL130C SAN1P22470 610 aa2.51□□□□□ -2.01
SHE2YKL130C GCD7P32502 381 aaPredicted RBP2.51□□□□□ -2.01
SHE2YKL130C CBF2P32504 956 aa2.51□□□□□ -2.01
SHE2YKL130C PAH1P32567 862 aa2.51□□□□□ -2.01
SHE2YKL130C NUP120P35729 1037 aa2.51□□□□□ -2.01
SHE2YKL130C MUD2P36084 527 aaKnown RBP2.51□□□□□ -2.01
SHE2YKL130C RIC1P40395 1056 aa2.51□□□□□ -2.01
SHE2YKL130C ESL1P40456 1118 aa2.51□□□□□ -2.01
SHE2YKL130C DPH1P40487 425 aaKnown RBP2.51□□□□□ -2.01
SHE2YKL130C IDS2P46958 469 aa2.51□□□□□ -2.01
SHE2YKL130C AAT1Q01802 451 aa2.51□□□□□ -2.01
SHE2YKL130C IMH1Q06704 911 aaKnown RBP2.51□□□□□ -2.01
SHE2YKL130C AIM6Q07716 390 aa2.51□□□□□ -2.01
SHE2YKL130C NRT1Q08485 598 aa2.51□□□□□ -2.01
SHE2YKL130C DSE3Q08729 430 aa2.51□□□□□ -2.01
SHE2YKL130C ATX2Q12067 313 aa2.51□□□□□ -2.01
SHE2YKL130C NBP2Q12163 236 aa2.51□□□□□ -2.01
SHE2YKL130C YPT1P01123 206 aaKnown RBP2.5□□□□□ -2.01
SHE2YKL130C CDC16P09798 840 aa2.5□□□□□ -2.01
SHE2YKL130C PET122P10355 254 aa2.5□□□□□ -2.01
SHE2YKL130C YCR043CP25361 127 aa2.5□□□□□ -2.01
SHE2YKL130C RPS7AP26786 190 aaKnown RBP2.5□□□□□ -2.01
SHE2YKL130C CDC5P32562 705 aa2.5□□□□□ -2.01
SHE2YKL130C NOP4P37838 685 aaKnown RBP2.5□□□□□ -2.01
SHE2YKL130C YEL068CP39977 110 aa2.5□□□□□ -2.01
SHE2YKL130C IST3P40565 148 aaPredicted RBP2.5□□□□□ -2.01
SHE2YKL130C SKP2P42843 763 aa2.5□□□□□ -2.01
SHE2YKL130C CIR1P42940 261 aa2.5□□□□□ -2.01
SHE2YKL130C PSP1P50896 841 aaKnown RBP2.5□□□□□ -2.01
SHE2YKL130C COS12P53053 380 aa2.5□□□□□ -2.01
SHE2YKL130C YGL260WP53056 76 aa2.5□□□□□ -2.01
SHE2YKL130C SNO4Q04902 237 aa2.5□□□□□ -2.01
SHE2YKL130C SDH5Q08230 162 aa2.5□□□□□ -2.01
SHE2YKL130C HSP33Q08914 237 aaKnown RBP2.5□□□□□ -2.01
SHE2YKL130C HSP32Q08992 237 aa2.5□□□□□ -2.01
SHE2YKL130C COX17Q12287 69 aa2.5□□□□□ -2.01
SHE2YKL130C ERP4Q12450 207 aa2.5□□□□□ -2.01
SHE2YKL130C SKM1Q12469 655 aa2.5□□□□□ -2.01
SHE2YKL130C FOB1O13329 566 aa2.49□□□□□ -2.01
SHE2YKL130C YLR302CO13544 120 aa2.49□□□□□ -2.01
SHE2YKL130C PHO2P07269 559 aa2.49□□□□□ -2.01
SHE2YKL130C AAC3P18238 307 aa2.49□□□□□ -2.01
SHE2YKL130C MAK32P23060 363 aa2.49□□□□□ -2.01
SHE2YKL130C CMK1P27466 446 aaKnown RBP2.49□□□□□ -2.01
SHE2YKL130C ARC40P38328 384 aaKnown RBP2.49□□□□□ -2.01
SHE2YKL130C STB5P38699 743 aa2.49□□□□□ -2.01
SHE2YKL130C YJR061WP40355 935 aa2.49□□□□□ -2.01
SHE2YKL130C YIL152WP40455 235 aa2.49□□□□□ -2.01
SHE2YKL130C CIN1P40987 1014 aa2.49□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 19 ms