RNA–Protein interactions for RNA: YIL156W

UBP7, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeast

Gene UBP7, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP7	YIL156W	DOT5	P40553	215 aa		5.23	□□□□□ -1.57
UBP7	YIL156W	YGR012W	P53206	393 aa		5.23	□□□□□ -1.57
UBP7	YIL156W	MMR1	Q06324	491 aa		5.23	□□□□□ -1.57
UBP7	YIL156W	THI22	Q06490	572 aa		5.23	□□□□□ -1.57
UBP7	YIL156W	AIM6	Q07716	390 aa		5.23	□□□□□ -1.57
UBP7	YIL156W	LYS21	Q12122	440 aa	Known RBP	5.23	□□□□□ -1.57
UBP7	YIL156W	TY1A-BL	Q12266	440 aa		5.23	□□□□□ -1.57
UBP7	YIL156W	EDE1	P34216	1381 aa		5.23	□□□□□ -1.57
UBP7	YIL156W	BUD16	P39988	312 aa		5.23	□□□□□ -1.57
UBP7	YIL156W	PFA3	P42836	336 aa		5.23	□□□□□ -1.57
UBP7	YIL156W	TAM41	P53230	385 aa		5.23	□□□□□ -1.57
UBP7	YIL156W	YAP6	Q03935	383 aa		5.23	□□□□□ -1.57
UBP7	YIL156W	NUS1	Q12063	375 aa		5.23	□□□□□ -1.57
UBP7	YIL156W	PHM7	Q12252	991 aa		5.23	□□□□□ -1.57
UBP7	YIL156W	CPR2	P23285	205 aa		5.23	□□□□□ -1.57
UBP7	YIL156W	MSP1	P28737	362 aa		5.23	□□□□□ -1.57
UBP7	YIL156W	HEL1	P36113	551 aa		5.23	□□□□□ -1.57
UBP7	YIL156W	TDP1	P38319	544 aa		5.23	□□□□□ -1.57
UBP7	YIL156W	STB5	P38699	743 aa		5.23	□□□□□ -1.57
UBP7	YIL156W	OSW5	P40219	148 aa		5.23	□□□□□ -1.57
UBP7	YIL156W	INN1	P53901	409 aa		5.23	□□□□□ -1.57
UBP7	YIL156W	ARX1	Q03862	593 aa	Known RBP	5.23	□□□□□ -1.57
UBP7	YIL156W	ROY1	Q04847	553 aa		5.23	□□□□□ -1.57
UBP7	YIL156W	YLR346C	Q06139	101 aa		5.23	□□□□□ -1.57
UBP7	YIL156W	APL5	Q08951	932 aa	Known RBP	5.23	□□□□□ -1.57
UBP7	YIL156W	AFI1	Q99222	893 aa		5.23	□□□□□ -1.57
UBP7	YIL156W	VMR1	P38735	1592 aa		5.22	□□□□□ -1.57
UBP7	YIL156W	ADE2	P21264	571 aa	Known RBP	5.22	□□□□□ -1.57
UBP7	YIL156W	RFC5	P38251	354 aa		5.22	□□□□□ -1.57
UBP7	YIL156W	VID24	P38263	362 aa		5.22	□□□□□ -1.57
UBP7	YIL156W	SFB3	P38810	929 aa		5.22	□□□□□ -1.57
UBP7	YIL156W	PZF1	P39933	429 aa		5.22	□□□□□ -1.57
UBP7	YIL156W	BIT61	P47041	543 aa		5.22	□□□□□ -1.57
UBP7	YIL156W	PRP31	P49704	494 aa	Predicted RBP	5.22	□□□□□ -1.57
UBP7	YIL156W	LCL3	P53153	274 aa		5.22	□□□□□ -1.57
UBP7	YIL156W	MNP1	P53163	194 aa	Predicted RBP	5.22	□□□□□ -1.57
UBP7	YIL156W	YBP2	P53169	641 aa		5.22	□□□□□ -1.57
UBP7	YIL156W	FDC1	Q03034	503 aa		5.22	□□□□□ -1.57
UBP7	YIL156W	MUS81	Q04149	632 aa	Predicted RBP	5.22	□□□□□ -1.57
UBP7	YIL156W	PHO92	Q06390	306 aa		5.22	□□□□□ -1.57
UBP7	YIL156W	BMS1	Q08965	1183 aa	Known RBP	5.22	□□□□□ -1.57
UBP7	YIL156W	RPN5	Q12250	445 aa	Known RBP	5.22	□□□□□ -1.57
UBP7	YIL156W	MDY2	Q12285	212 aa		5.22	□□□□□ -1.57
UBP7	YIL156W	APL1	P27351	700 aa		5.22	□□□□□ -1.57
UBP7	YIL156W	GLY1	P37303	387 aa	Known RBP	5.22	□□□□□ -1.57
UBP7	YIL156W	EFR3	Q03653	782 aa	Known RBP	5.22	□□□□□ -1.57
UBP7	YIL156W	LUC7	Q07508	261 aa	Predicted RBP	5.22	□□□□□ -1.57
UBP7	YIL156W	IML1	P47170	1584 aa		5.22	□□□□□ -1.57
UBP7	YIL156W	CTT1	P06115	562 aa		5.21	□□□□□ -1.57
UBP7	YIL156W	LAT1	P12695	482 aa	Known RBP	5.21	□□□□□ -1.57
UBP7	YIL156W	DAL80	P26343	269 aa		5.21	□□□□□ -1.57
UBP7	YIL156W	LOT5	P34234	306 aa		5.21	□□□□□ -1.57
UBP7	YIL156W	SDP1	P40479	209 aa		5.21	□□□□□ -1.57
UBP7	YIL156W	SCW11	P53189	542 aa		5.21	□□□□□ -1.57
UBP7	YIL156W	ARG5,6	Q01217	863 aa		5.21	□□□□□ -1.57
UBP7	YIL156W	STP3	Q05937	343 aa		5.21	□□□□□ -1.57
UBP7	YIL156W	SPH1	Q06160	661 aa		5.21	□□□□□ -1.57
UBP7	YIL156W	YJR112W-A	Q3E743	109 aa		5.21	□□□□□ -1.57
UBP7	YIL156W	ERG20	P08524	352 aa	Known RBP	5.21	□□□□□ -1.58
UBP7	YIL156W	YML002W	P0CF17	737 aa		5.21	□□□□□ -1.58
UBP7	YIL156W	CAF20	P12962	161 aa	Known RBP	5.21	□□□□□ -1.58
UBP7	YIL156W	APN1	P22936	367 aa		5.21	□□□□□ -1.58
UBP7	YIL156W	PAP1	P29468	568 aa	Known RBP	5.21	□□□□□ -1.58
UBP7	YIL156W	NIP1	P32497	812 aa	Known RBP	5.21	□□□□□ -1.58
UBP7	YIL156W	CST26	P38226	397 aa		5.21	□□□□□ -1.58
UBP7	YIL156W	MUP3	P38734	546 aa		5.21	□□□□□ -1.58
UBP7	YIL156W	YHR054C	P38780	354 aa		5.21	□□□□□ -1.58
UBP7	YIL156W	YHR131C	P38835	850 aa		5.21	□□□□□ -1.58
UBP7	YIL156W	SLZ1	P40167	298 aa		5.21	□□□□□ -1.58
UBP7	YIL156W	PRO2	P54885	456 aa	Known RBP	5.21	□□□□□ -1.58
UBP7	YIL156W	YPL108W	Q02872	168 aa	Predicted RBP	5.21	□□□□□ -1.58
UBP7	YIL156W	MUB1	Q03162	620 aa		5.21	□□□□□ -1.58
UBP7	YIL156W	TY1A-MR1	Q04215	440 aa		5.21	□□□□□ -1.58
UBP7	YIL156W	PML1	Q07930	204 aa	Predicted RBP	5.21	□□□□□ -1.58
UBP7	YIL156W	RIB2	Q12362	591 aa	Known RBP	5.21	□□□□□ -1.58
UBP7	YIL156W	SPE4	Q12455	300 aa		5.21	□□□□□ -1.58
UBP7	YIL156W	OM45	P16547	393 aa		5.21	□□□□□ -1.58
UBP7	YIL156W	PRP28	P23394	588 aa		5.21	□□□□□ -1.58
UBP7	YIL156W	DAD2	P36162	133 aa		5.21	□□□□□ -1.58
UBP7	YIL156W	MAL33	P38157	468 aa		5.21	□□□□□ -1.58
UBP7	YIL156W	MTG2	P38860	518 aa		5.21	□□□□□ -1.58
UBP7	YIL156W	CEM1	P39525	442 aa		5.21	□□□□□ -1.58
UBP7	YIL156W	ASE1	P50275	885 aa		5.21	□□□□□ -1.58
UBP7	YIL156W	SHE10	P53075	577 aa		5.21	□□□□□ -1.58
UBP7	YIL156W	COX18	P53239	316 aa		5.21	□□□□□ -1.58
UBP7	YIL156W	REC102	Q02721	264 aa		5.21	□□□□□ -1.58
UBP7	YIL156W	MSC2	Q03455	724 aa		5.21	□□□□□ -1.58
UBP7	YIL156W	YEH1	Q07804	573 aa		5.21	□□□□□ -1.58
UBP7	YIL156W	YVC1	Q12324	675 aa		5.21	□□□□□ -1.58
UBP7	YIL156W	ERG27	Q12452	347 aa	Known RBP	5.21	□□□□□ -1.58
UBP7	YIL156W	PRP45	P28004	379 aa	Predicted RBP	5.2	□□□□□ -1.58
UBP7	YIL156W	GCD7	P32502	381 aa	Predicted RBP	5.2	□□□□□ -1.58
UBP7	YIL156W	SSE1	P32589	693 aa	Known RBP	5.2	□□□□□ -1.58
UBP7	YIL156W	YEL043W	P32618	956 aa		5.2	□□□□□ -1.58
UBP7	YIL156W	SUR1	P33300	382 aa		5.2	□□□□□ -1.58
UBP7	YIL156W	ADH5	P38113	351 aa	Known RBP	5.2	□□□□□ -1.58
UBP7	YIL156W	POL12	P38121	705 aa	Predicted RBP	5.2	□□□□□ -1.58
UBP7	YIL156W	PCH2	P38126	564 aa		5.2	□□□□□ -1.58
UBP7	YIL156W	CRG1	P38892	291 aa	RIP-Chip data	5.2	□□□□□ -1.58	not detected
UBP7	YIL156W	QCR6	P00127	147 aa		5.2	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms