RNA–Protein interactions for RNA: YGR006W

PRP18, Transcript of Splicing factor and component of snRNP U5, yeast

Gene PRP18, Length 756 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRP18	YGR006W	GEX2	P36173	615 aa		4.21	□□□□□ -1.74
PRP18	YGR006W	FTH1	P38310	465 aa		4.21	□□□□□ -1.74
PRP18	YGR006W	ATP23	P53722	227 aa		4.21	□□□□□ -1.74
PRP18	YGR006W	YPL071C	Q02864	156 aa		4.21	□□□□□ -1.74
PRP18	YGR006W	TMA16	Q08687	178 aa		4.21	□□□□□ -1.74
PRP18	YGR006W	LEA1	Q08963	238 aa	Predicted RBP	4.21	□□□□□ -1.74
PRP18	YGR006W	LYS21	Q12122	440 aa	Known RBP	4.21	□□□□□ -1.74
PRP18	YGR006W	NBP2	Q12163	236 aa		4.21	□□□□□ -1.74
PRP18	YGR006W	CET1	O13297	549 aa	Predicted RBP	4.2	□□□□□ -1.74
PRP18	YGR006W	AXL2	P38928	823 aa		4.2	□□□□□ -1.74
PRP18	YGR006W	VID27	P40157	782 aa		4.2	□□□□□ -1.74
PRP18	YGR006W	UBP7	P40453	1071 aa		4.2	□□□□□ -1.74
PRP18	YGR006W	BPL1	P48445	690 aa	Predicted RBP	4.2	□□□□□ -1.74
PRP18	YGR006W	VPS4	P52917	437 aa		4.2	□□□□□ -1.74
PRP18	YGR006W	YDL121C	Q07541	149 aa		4.2	□□□□□ -1.74
PRP18	YGR006W	NUS1	Q12063	375 aa		4.2	□□□□□ -1.74
PRP18	YGR006W	PGK1	P00560	416 aa	Known RBP	4.19	□□□□□ -1.74
PRP18	YGR006W	MAK32	P23060	363 aa		4.19	□□□□□ -1.74
PRP18	YGR006W	CDC15	P27636	974 aa		4.19	□□□□□ -1.74
PRP18	YGR006W	GSH1	P32477	678 aa		4.19	□□□□□ -1.74
PRP18	YGR006W	CBF2	P32504	956 aa		4.19	□□□□□ -1.74
PRP18	YGR006W	SRB5	P32585	307 aa		4.19	□□□□□ -1.74
PRP18	YGR006W	ASG1	P40467	964 aa		4.19	□□□□□ -1.74
PRP18	YGR006W	CBK1	P53894	756 aa		4.19	□□□□□ -1.74
PRP18	YGR006W	SEG1	Q04279	960 aa		4.19	□□□□□ -1.74
PRP18	YGR006W	RCO1	Q04779	684 aa		4.19	□□□□□ -1.74
PRP18	YGR006W	TPO3	Q06451	622 aa		4.19	□□□□□ -1.74
PRP18	YGR006W	VCX1	Q99385	411 aa		4.19	□□□□□ -1.74
PRP18	YGR006W	ILS1	P09436	1072 aa	Known RBP	4.18	□□□□□ -1.74
PRP18	YGR006W	APN1	P22936	367 aa		4.18	□□□□□ -1.74
PRP18	YGR006W	MCM10	P32354	571 aa		4.18	□□□□□ -1.74
PRP18	YGR006W	PFK26	P40433	827 aa	Known RBP	4.18	□□□□□ -1.74
PRP18	YGR006W	ADE16	P54113	591 aa	Known RBP	4.18	□□□□□ -1.74
PRP18	YGR006W	REG1	Q00816	1014 aa		4.18	□□□□□ -1.74
PRP18	YGR006W	SVL3	Q03088	825 aa	Known RBP	4.18	□□□□□ -1.74
PRP18	YGR006W	SNO4	Q04902	237 aa		4.18	□□□□□ -1.74
PRP18	YGR006W	SWA2	Q06677	668 aa		4.18	□□□□□ -1.74
PRP18	YGR006W	THI3	Q07471	609 aa		4.18	□□□□□ -1.74
PRP18	YGR006W	BUD21	Q08492	214 aa	Predicted RBP	4.18	□□□□□ -1.74
PRP18	YGR006W	HSP33	Q08914	237 aa	Known RBP	4.18	□□□□□ -1.74
PRP18	YGR006W	HSP32	Q08992	237 aa		4.18	□□□□□ -1.74
PRP18	YGR006W	YLR111W	Q12528	110 aa		4.18	□□□□□ -1.74
PRP18	YGR006W	FUM1	P08417	488 aa	Known RBP	4.17	□□□□□ -1.74
PRP18	YGR006W	RPB2	P08518	1224 aa	Known RBP	4.17	□□□□□ -1.74
PRP18	YGR006W	NUP1	P20676	1076 aa		4.17	□□□□□ -1.74
PRP18	YGR006W	URE2	P23202	354 aa	Known RBP	4.17	□□□□□ -1.74
PRP18	YGR006W	MBR1	P23493	339 aa		4.17	□□□□□ -1.74
PRP18	YGR006W	ERG8	P24521	451 aa		4.17	□□□□□ -1.74
PRP18	YGR006W	YSP3	P25036	478 aa		4.17	□□□□□ -1.74
PRP18	YGR006W	SNO3	P43544	222 aa		4.17	□□□□□ -1.74
PRP18	YGR006W	NMD5	P46970	1048 aa		4.17	□□□□□ -1.74
PRP18	YGR006W	MEP3	P53390	489 aa		4.17	□□□□□ -1.74
PRP18	YGR006W	LGE1	Q02796	332 aa	Known RBP	4.17	□□□□□ -1.74
PRP18	YGR006W	FCP1	Q03254	732 aa		4.17	□□□□□ -1.74
PRP18	YGR006W	THI7	Q05998	598 aa		4.17	□□□□□ -1.74
PRP18	YGR006W	CRN1	Q06440	651 aa		4.17	□□□□□ -1.74
PRP18	YGR006W	YOL087C	Q99247	1116 aa		4.17	□□□□□ -1.74
PRP18	YGR006W	SUI3	P09064	285 aa	Known RBP	4.16	□□□□□ -1.74
PRP18	YGR006W	PCT1	P13259	424 aa		4.16	□□□□□ -1.74
PRP18	YGR006W	MSS51	P32335	436 aa		4.16	□□□□□ -1.74
PRP18	YGR006W	MRP20	P32387	263 aa		4.16	□□□□□ -1.74
PRP18	YGR006W	LHS1	P36016	881 aa		4.16	□□□□□ -1.74
PRP18	YGR006W	AAP1	P37898	856 aa	Known RBP	4.16	□□□□□ -1.74
PRP18	YGR006W	IMD2	P38697	523 aa	Known RBP	4.16	□□□□□ -1.74
PRP18	YGR006W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
PRP18	YGR006W	MRX1	P40050	688 aa		4.16	□□□□□ -1.74
PRP18	YGR006W	CIN1	P40987	1014 aa		4.16	□□□□□ -1.74
PRP18	YGR006W	IRC7	P43623	340 aa		4.16	□□□□□ -1.74
PRP18	YGR006W	IMD3	P50095	523 aa	Known RBP	4.16	□□□□□ -1.74
PRP18	YGR006W	ORC5	P50874	479 aa		4.16	□□□□□ -1.74
PRP18	YGR006W	SNU56	Q03782	492 aa	Known RBP	4.16	□□□□□ -1.74
PRP18	YGR006W	RIM13	Q03792	727 aa		4.16	□□□□□ -1.74
PRP18	YGR006W	MRP2	P10663	115 aa	Predicted RBP	4.15	□□□□□ -1.75
PRP18	YGR006W	CHS3	P29465	1165 aa		4.15	□□□□□ -1.75
PRP18	YGR006W	SWE1	P32944	819 aa		4.15	□□□□□ -1.75
PRP18	YGR006W	SOF1	P33750	489 aa	Known RBP	4.15	□□□□□ -1.75
PRP18	YGR006W	SEC31	P38968	1273 aa	Known RBP	4.15	□□□□□ -1.75
PRP18	YGR006W	YJR061W	P40355	935 aa		4.15	□□□□□ -1.75
PRP18	YGR006W	RPN11	P43588	306 aa	Known RBP	4.15	□□□□□ -1.75
PRP18	YGR006W	BSC5	P53755	489 aa		4.15	□□□□□ -1.75
PRP18	YGR006W	IDP3	P53982	420 aa	Known RBP	4.15	□□□□□ -1.75
PRP18	YGR006W	ERG13	P54839	491 aa	Known RBP	4.15	□□□□□ -1.75
PRP18	YGR006W	MUB1	Q03162	620 aa		4.15	□□□□□ -1.75
PRP18	YGR006W	PSK2	Q08217	1101 aa		4.15	□□□□□ -1.75
PRP18	YGR006W	SRP54	P20424	541 aa	Known RBP	4.14	□□□□□ -1.75
PRP18	YGR006W	GFD2	P25370	566 aa	Known RBP	4.14	□□□□□ -1.75
PRP18	YGR006W	NTR2	P36118	322 aa	Predicted RBP	4.14	□□□□□ -1.75
PRP18	YGR006W	PSD1	P39006	500 aa		4.14	□□□□□ -1.75
PRP18	YGR006W	ERV46	P39727	415 aa		4.14	□□□□□ -1.75
PRP18	YGR006W	LTP1	P40347	161 aa		4.14	□□□□□ -1.75
PRP18	YGR006W	DPH1	P40487	425 aa	Known RBP	4.14	□□□□□ -1.75
PRP18	YGR006W	MNT3	P40549	630 aa		4.14	□□□□□ -1.75
PRP18	YGR006W	ARC1	P46672	376 aa	Known RBP	4.14	□□□□□ -1.75
PRP18	YGR006W	FRE7	Q12333	620 aa		4.14	□□□□□ -1.75
PRP18	YGR006W	SKM1	Q12469	655 aa		4.14	□□□□□ -1.75
PRP18	YGR006W	PRE8	P23639	250 aa		4.13	□□□□□ -1.75
PRP18	YGR006W	SLZ1	P40167	298 aa		4.13	□□□□□ -1.75
PRP18	YGR006W	TMA108	P40462	946 aa		4.13	□□□□□ -1.75
PRP18	YGR006W	ULP2	P40537	1034 aa	Predicted RBP	4.13	□□□□□ -1.75
PRP18	YGR006W	YPR003C	P53394	754 aa		4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 43.1 ms