RNA–Protein interactions for RNA: YFR027W

ECO1, Transcript of Acetyltransferase, yeast

Gene ECO1, Length 846 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECO1	YFR027W	YGR161W-C	Q3E744	92 aa		3.52	□□□□□ -1.85
ECO1	YFR027W	RRP5	Q05022	1729 aa	Known RBP	3.52	□□□□□ -1.85
ECO1	YFR027W	LTE1	P07866	1435 aa		3.52	□□□□□ -1.85
ECO1	YFR027W	RPO41	P13433	1351 aa	Known RBP	3.51	□□□□□ -1.85
ECO1	YFR027W	IML1	P47170	1584 aa		3.51	□□□□□ -1.85
ECO1	YFR027W	JIP3	O13555	125 aa		3.51	□□□□□ -1.85
ECO1	YFR027W	CDC8	P00572	216 aa		3.51	□□□□□ -1.85
ECO1	YFR027W	SNA3	P14359	133 aa		3.51	□□□□□ -1.85
ECO1	YFR027W	BMH1	P29311	267 aa	Known RBP	3.51	□□□□□ -1.85
ECO1	YFR027W	SIN4	P32259	974 aa		3.51	□□□□□ -1.85
ECO1	YFR027W	SSE1	P32589	693 aa	Known RBP	3.51	□□□□□ -1.85
ECO1	YFR027W	VMA8	P32610	256 aa	Known RBP	3.51	□□□□□ -1.85
ECO1	YFR027W	YPT7	P32939	208 aa		3.51	□□□□□ -1.85
ECO1	YFR027W	CPR5	P35176	225 aa		3.51	□□□□□ -1.85
ECO1	YFR027W	RCN1	P36054	211 aa		3.51	□□□□□ -1.85
ECO1	YFR027W	RSM22	P36056	628 aa		3.51	□□□□□ -1.85
ECO1	YFR027W	SPC42	P36094	363 aa		3.51	□□□□□ -1.85
ECO1	YFR027W	MNN2	P38069	597 aa		3.51	□□□□□ -1.85
ECO1	YFR027W	ATP3	P38077	311 aa	Known RBP	3.51	□□□□□ -1.85
ECO1	YFR027W	MRX3	P38172	270 aa		3.51	□□□□□ -1.85
ECO1	YFR027W	CRP1	P38845	465 aa	Known RBP	3.51	□□□□□ -1.85
ECO1	YFR027W	YHR202W	P38887	602 aa		3.51	□□□□□ -1.85
ECO1	YFR027W	SER3	P40054	469 aa		3.51	□□□□□ -1.85
ECO1	YFR027W	TMN3	P40071	706 aa		3.51	□□□□□ -1.85
ECO1	YFR027W	ULP2	P40537	1034 aa	Predicted RBP	3.51	□□□□□ -1.85
ECO1	YFR027W	GCD10	P41814	478 aa		3.51	□□□□□ -1.85
ECO1	YFR027W	VTC2	P43585	828 aa		3.51	□□□□□ -1.85
ECO1	YFR027W	YJR096W	P47137	282 aa		3.51	□□□□□ -1.85
ECO1	YFR027W	PMT3	P47190	753 aa		3.51	□□□□□ -1.85
ECO1	YFR027W	HLJ1	P48353	224 aa		3.51	□□□□□ -1.85
ECO1	YFR027W	EFM5	P53200	248 aa	Known RBP	3.51	□□□□□ -1.85
ECO1	YFR027W	MDR1	P53258	950 aa		3.51	□□□□□ -1.85
ECO1	YFR027W	RTC4	P53850	401 aa		3.51	□□□□□ -1.85
ECO1	YFR027W	SRL4	Q03085	281 aa		3.51	□□□□□ -1.85
ECO1	YFR027W	PPM1	Q04081	328 aa		3.51	□□□□□ -1.85
ECO1	YFR027W	RGC1	Q06108	1083 aa	Known RBP	3.51	□□□□□ -1.85
ECO1	YFR027W	SEC10	Q06245	871 aa		3.51	□□□□□ -1.85
ECO1	YFR027W	THI73	Q07904	523 aa		3.51	□□□□□ -1.85
ECO1	YFR027W	YLR031W	Q07978	186 aa		3.51	□□□□□ -1.85
ECO1	YFR027W	GET4	Q12125	312 aa		3.51	□□□□□ -1.85
ECO1	YFR027W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	3.51	□□□□□ -1.85	not detected
ECO1	YFR027W	TAF3	Q12297	353 aa		3.51	□□□□□ -1.85
ECO1	YFR027W	BBP1	Q12365	385 aa		3.51	□□□□□ -1.85
ECO1	YFR027W	POM152	P39685	1337 aa		3.5	□□□□□ -1.85
ECO1	YFR027W	PDE2	P06776	526 aa		3.5	□□□□□ -1.85
ECO1	YFR027W	KAR1	P11927	433 aa		3.5	□□□□□ -1.85
ECO1	YFR027W	THR1	P17423	357 aa	Known RBP	3.5	□□□□□ -1.85
ECO1	YFR027W	PHO13	P19881	312 aa		3.5	□□□□□ -1.85
ECO1	YFR027W	CNA1	P23287	553 aa		3.5	□□□□□ -1.85
ECO1	YFR027W	MRPL25	P23369	157 aa		3.5	□□□□□ -1.85
ECO1	YFR027W	MBR1	P23493	339 aa		3.5	□□□□□ -1.85
ECO1	YFR027W	CLB2	P24869	491 aa		3.5	□□□□□ -1.85
ECO1	YFR027W	GSY2	P27472	705 aa		3.5	□□□□□ -1.85
ECO1	YFR027W	SMI1	P32566	505 aa		3.5	□□□□□ -1.85
ECO1	YFR027W	MRE11	P32829	692 aa		3.5	□□□□□ -1.85
ECO1	YFR027W	UBC6	P33296	250 aa	Predicted RBP	3.5	□□□□□ -1.85
ECO1	YFR027W	PHO11	P35842	467 aa		3.5	□□□□□ -1.85
ECO1	YFR027W	PXL1	P36166	706 aa		3.5	□□□□□ -1.85
ECO1	YFR027W	JNM1	P36224	373 aa		3.5	□□□□□ -1.85
ECO1	YFR027W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	3.5	□□□□□ -1.85	not detected
ECO1	YFR027W	APD1	P38281	316 aa		3.5	□□□□□ -1.85
ECO1	YFR027W	SLX1	P38324	304 aa		3.5	□□□□□ -1.85
ECO1	YFR027W	BIT2	P38346	545 aa		3.5	□□□□□ -1.85
ECO1	YFR027W	PHO12	P38693	467 aa		3.5	□□□□□ -1.85
ECO1	YFR027W	OTU2	P38747	307 aa	Known RBP	3.5	□□□□□ -1.85
ECO1	YFR027W	SFB3	P38810	929 aa		3.5	□□□□□ -1.85
ECO1	YFR027W	PEX18	P38855	283 aa		3.5	□□□□□ -1.85
ECO1	YFR027W	SNL1	P40548	159 aa		3.5	□□□□□ -1.85
ECO1	YFR027W	MKT1	P40850	830 aa	Known RBP	3.5	□□□□□ -1.85
ECO1	YFR027W	LIF1	P53150	421 aa		3.5	□□□□□ -1.85
ECO1	YFR027W	YGR054W	P53235	642 aa	Known RBP	3.5	□□□□□ -1.85
ECO1	YFR027W	YNR029C	P53729	429 aa	Known RBP	3.5	□□□□□ -1.85
ECO1	YFR027W	BOP3	P53958	396 aa		3.5	□□□□□ -1.85
ECO1	YFR027W	FIN1	Q03898	291 aa		3.5	□□□□□ -1.85
ECO1	YFR027W	MTQ2	Q03920	221 aa	Predicted RBP	3.5	□□□□□ -1.85
ECO1	YFR027W	RVB1	Q03940	463 aa	Known RBP	3.5	□□□□□ -1.85
ECO1	YFR027W	VPS38	Q05919	439 aa		3.5	□□□□□ -1.85
ECO1	YFR027W	DIA2	Q08496	732 aa	Predicted RBP	3.5	□□□□□ -1.85
ECO1	YFR027W	UIP4	Q08926	304 aa		3.5	□□□□□ -1.85
ECO1	YFR027W	TRM8	Q12009	286 aa		3.5	□□□□□ -1.85
ECO1	YFR027W	APL4	Q12028	832 aa		3.5	□□□□□ -1.85
ECO1	YFR027W	ICL2	Q12031	575 aa		3.5	□□□□□ -1.85
ECO1	YFR027W	FAP7	Q12055	197 aa	Predicted RBP	3.5	□□□□□ -1.85
ECO1	YFR027W	MRH1	Q12117	320 aa	Predicted RBP	3.5	□□□□□ -1.85
ECO1	YFR027W	RRP6	Q12149	733 aa	Known RBP	3.5	□□□□□ -1.85
ECO1	YFR027W	MED4	Q12343	284 aa		3.5	□□□□□ -1.85
ECO1	YFR027W	RMP1	Q12530	201 aa		3.5	□□□□□ -1.85
ECO1	YFR027W	ECM3	Q99252	613 aa		3.5	□□□□□ -1.85
ECO1	YFR027W	SEY1	Q99287	776 aa		3.5	□□□□□ -1.85
ECO1	YFR027W	GPA1	P08539	472 aa		3.49	□□□□□ -1.85
ECO1	YFR027W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	3.49	□□□□□ -1.85	not detected
ECO1	YFR027W	DPB2	P24482	689 aa	Predicted RBP	3.49	□□□□□ -1.85
ECO1	YFR027W	SPB1	P25582	841 aa	Predicted RBP	3.49	□□□□□ -1.85
ECO1	YFR027W	IMG2	P25642	146 aa	Predicted RBP	3.49	□□□□□ -1.85
ECO1	YFR027W	ACP1	P32463	125 aa		3.49	□□□□□ -1.85
ECO1	YFR027W	PRP19	P32523	503 aa	Known RBP	3.49	□□□□□ -1.85
ECO1	YFR027W	PET127	P32606	800 aa		3.49	□□□□□ -1.85
ECO1	YFR027W	BUD2	P33314	1104 aa		3.49	□□□□□ -1.85
ECO1	YFR027W	TYS1	P36421	394 aa	Known RBP	3.49	□□□□□ -1.85
ECO1	YFR027W	RFT1	P38206	574 aa	Predicted RBP	3.49	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 26.5 ms