RNA–Protein interactions for RNA: YDR498C

SEC20, Transcript of Membrane glycoprotein v-SNARE, yeastyeast

Gene SEC20, Length 1,152 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC20YDR498C MSD1P15179 658 aaKnown RBP5.81□□□□□ -1.48
SEC20YDR498C NPP1P25353 742 aa5.81□□□□□ -1.48
SEC20YDR498C MET22P32179 357 aa5.81□□□□□ -1.48
SEC20YDR498C SQT1P35184 431 aa5.81□□□□□ -1.48
SEC20YDR498C RRN3P36070 627 aa5.81□□□□□ -1.48
SEC20YDR498C RDH54P38086 958 aa5.81□□□□□ -1.48
SEC20YDR498C POL12P38121 705 aaPredicted RBP5.81□□□□□ -1.48
SEC20YDR498C ECM13P38195 257 aa5.81□□□□□ -1.48
SEC20YDR498C ATG12P38316 186 aa5.81□□□□□ -1.48
SEC20YDR498C YJL206CP39529 758 aa5.81□□□□□ -1.48
SEC20YDR498C SSP120P39931 234 aaKnown RBP5.81□□□□□ -1.48
SEC20YDR498C SUM1P46676 1062 aa5.81□□□□□ -1.48
SEC20YDR498C MNN11P46985 422 aaKnown RBP5.81□□□□□ -1.48
SEC20YDR498C STR3P53101 465 aaKnown RBP5.81□□□□□ -1.48
SEC20YDR498C USE1P53146 245 aa5.81□□□□□ -1.48
SEC20YDR498C RPL34AP87262 121 aaPredicted RBP5.81□□□□□ -1.48
SEC20YDR498C UBP2Q01476 1272 aa5.81□□□□□ -1.48
SEC20YDR498C TFB2Q02939 513 aa5.81□□□□□ -1.48
SEC20YDR498C NHX1Q04121 633 aa5.81□□□□□ -1.48
SEC20YDR498C SPC24Q04477 213 aa5.81□□□□□ -1.48
SEC20YDR498C GRX8Q05926 109 aa5.81□□□□□ -1.48
SEC20YDR498C MRI1Q06489 411 aaKnown RBP5.81□□□□□ -1.48
SEC20YDR498C ENT4Q07872 247 aa5.81□□□□□ -1.48
SEC20YDR498C LDB17Q12342 491 aa5.81□□□□□ -1.48
SEC20YDR498C KCS1Q12494 1050 aa5.81□□□□□ -1.48
SEC20YDR498C HIS1P00498 297 aaKnown RBP5.8□□□□□ -1.48
SEC20YDR498C ENO2P00925 437 aaKnown RBP5.8□□□□□ -1.48
SEC20YDR498C ATP1P07251 545 aaKnown RBP5.8□□□□□ -1.48
SEC20YDR498C GCY1P14065 312 aaKnown RBP RIP-Chip data5.8□□□□□ -1.48not detected
SEC20YDR498C CLN1P20437 546 aa5.8□□□□□ -1.48
SEC20YDR498C AAT2P23542 418 aaKnown RBP5.8□□□□□ -1.48
SEC20YDR498C GFD2P25370 566 aaKnown RBP5.8□□□□□ -1.48
SEC20YDR498C MSH2P25847 964 aa5.8□□□□□ -1.48
SEC20YDR498C RAD16P31244 790 aa5.8□□□□□ -1.48
SEC20YDR498C MRS6P32864 603 aaKnown RBP5.8□□□□□ -1.48
SEC20YDR498C RRP14P36080 434 aaKnown RBP5.8□□□□□ -1.48
SEC20YDR498C REV7P38927 245 aa5.8□□□□□ -1.48
SEC20YDR498C TAF1P46677 1066 aa5.8□□□□□ -1.48
SEC20YDR498C DLD2P46681 530 aaKnown RBP5.8□□□□□ -1.48
SEC20YDR498C TAN1P53072 289 aaPredicted RBP5.8□□□□□ -1.48
SEC20YDR498C PCL10P53124 433 aa5.8□□□□□ -1.48
SEC20YDR498C MTD1Q02046 320 aaKnown RBP5.8□□□□□ -1.48
SEC20YDR498C TVP15Q03860 143 aa5.8□□□□□ -1.48
SEC20YDR498C EMI2Q04409 500 aaKnown RBP5.8□□□□□ -1.48
SEC20YDR498C RSC2Q06488 889 aa5.8□□□□□ -1.48
SEC20YDR498C BSP1Q06604 576 aa5.8□□□□□ -1.48
SEC20YDR498C PMT7Q06644 662 aa5.8□□□□□ -1.48
SEC20YDR498C AAD15Q08361 143 aa5.8□□□□□ -1.48
SEC20YDR498C VHS3Q08438 674 aa5.8□□□□□ -1.48
SEC20YDR498C YPQ1Q12010 308 aa5.8□□□□□ -1.48
SEC20YDR498C GNT1Q12096 491 aa5.8□□□□□ -1.48
SEC20YDR498C LPX1Q12405 387 aaKnown RBP5.8□□□□□ -1.48
SEC20YDR498C RGS2Q99188 309 aa5.8□□□□□ -1.48
SEC20YDR498C EXO70P19658 623 aa5.79□□□□□ -1.48
SEC20YDR498C PGS1P25578 521 aa5.79□□□□□ -1.48
SEC20YDR498C RAD14P28519 371 aa5.79□□□□□ -1.48
SEC20YDR498C VPH1P32563 840 aaKnown RBP5.79□□□□□ -1.48
SEC20YDR498C STE13P33894 931 aa5.79□□□□□ -1.48
SEC20YDR498C ALY1P36117 915 aa5.79□□□□□ -1.48
SEC20YDR498C CTP1P38152 299 aa5.79□□□□□ -1.48
SEC20YDR498C SRP68P38687 599 aaKnown RBP5.79□□□□□ -1.48
SEC20YDR498C UBP6P43593 499 aaKnown RBP5.79□□□□□ -1.48
SEC20YDR498C FAR3P46671 204 aa5.79□□□□□ -1.48
SEC20YDR498C RTT101P47050 842 aa5.79□□□□□ -1.48
SEC20YDR498C YJR115WP47152 169 aa5.79□□□□□ -1.48
SEC20YDR498C AIF1P52923 378 aa5.79□□□□□ -1.48
SEC20YDR498C NNF2P53253 936 aa5.79□□□□□ -1.48
SEC20YDR498C GTR1Q00582 310 aa5.79□□□□□ -1.48
SEC20YDR498C MET14Q02196 202 aa5.79□□□□□ -1.48
SEC20YDR498C NUP100Q02629 959 aa5.79□□□□□ -1.48
SEC20YDR498C ENT5Q03769 411 aaKnown RBP5.79□□□□□ -1.48
SEC20YDR498C CSN9Q03981 162 aa5.79□□□□□ -1.48
SEC20YDR498C GLO2Q05584 274 aa5.79□□□□□ -1.48
SEC20YDR498C ECM38Q05902 660 aaPredicted RBP5.79□□□□□ -1.48
SEC20YDR498C FAR10Q06001 478 aa5.79□□□□□ -1.48
SEC20YDR498C MRN1Q08925 612 aaKnown RBP RIP-Chip data5.79□□□□□ -1.48not detected
SEC20YDR498C CHS5Q12114 671 aaKnown RBP5.79□□□□□ -1.48
SEC20YDR498C UPC2Q12151 913 aa5.79□□□□□ -1.48
SEC20YDR498C NDJ1Q12366 352 aa5.79□□□□□ -1.48
SEC20YDR498C YPR089WO13585 888 aa5.78□□□□□ -1.48
SEC20YDR498C AMD1P15274 810 aaKnown RBP5.78□□□□□ -1.48
SEC20YDR498C ATP12P22135 325 aa5.78□□□□□ -1.48
SEC20YDR498C AMD2P22580 549 aa5.78□□□□□ -1.48
SEC20YDR498C PEX1P24004 1043 aa5.78□□□□□ -1.48
SEC20YDR498C PHO3P24031 467 aa5.78□□□□□ -1.48
SEC20YDR498C RPC19P28000 142 aaKnown RBP5.78□□□□□ -1.48
SEC20YDR498C HRR25P29295 494 aaKnown RBP5.78□□□□□ -1.48
SEC20YDR498C BEM1P29366 551 aa5.78□□□□□ -1.48
SEC20YDR498C HEM12P32347 362 aaPredicted RBP5.78□□□□□ -1.48
SEC20YDR498C PHA2P32452 334 aa5.78□□□□□ -1.48
SEC20YDR498C KAR9P32526 644 aa5.78□□□□□ -1.48
SEC20YDR498C FUI1P38196 639 aa5.78□□□□□ -1.48
SEC20YDR498C TSC10P38342 320 aa5.78□□□□□ -1.48
SEC20YDR498C STB5P38699 743 aa5.78□□□□□ -1.48
SEC20YDR498C GND1P38720 489 aaKnown RBP5.78□□□□□ -1.48
SEC20YDR498C GGA2P38817 585 aaKnown RBP5.78□□□□□ -1.48
SEC20YDR498C HOS4P40480 1083 aa5.78□□□□□ -1.48
SEC20YDR498C FAF1P40546 346 aaPredicted RBP5.78□□□□□ -1.48
SEC20YDR498C YJL132WP47014 750 aa5.78□□□□□ -1.48
SEC20YDR498C YJR142WP47173 342 aa5.78□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms