RNA–Protein interactions for RNA: YDR395W

SXM1, Transcript of Nuclear transport factor (karyopherin), yeastyeast

Gene SXM1, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SXM1YDR395W RPB4P20433 221 aaPredicted RBP1.58□□□□□ -2.16
SXM1YDR395W MSN1P22148 382 aa1.58□□□□□ -2.16
SXM1YDR395W DBF4P32325 704 aa1.58□□□□□ -2.16
SXM1YDR395W KRE6P32486 720 aa1.58□□□□□ -2.16
SXM1YDR395W KAP122P32767 1081 aa1.58□□□□□ -2.16
SXM1YDR395W SUR1P33300 382 aa1.58□□□□□ -2.16
SXM1YDR395W CBF5P33322 483 aaKnown RBP RIP-Chip data1.58□□□□□ -2.16not detected
SXM1YDR395W HEL1P36113 551 aa1.58□□□□□ -2.16
SXM1YDR395W ADH5P38113 351 aaKnown RBP1.58□□□□□ -2.16
SXM1YDR395W POL12P38121 705 aaPredicted RBP1.58□□□□□ -2.16
SXM1YDR395W NTC20P38302 140 aaPredicted RBP1.58□□□□□ -2.16
SXM1YDR395W YHL026CP38740 315 aa1.58□□□□□ -2.16
SXM1YDR395W KEL1P38853 1164 aaKnown RBP1.58□□□□□ -2.16
SXM1YDR395W YDR089WP38966 869 aa1.58□□□□□ -2.16
SXM1YDR395W RVS167P39743 482 aaKnown RBP1.58□□□□□ -2.16
SXM1YDR395W STL1P39932 569 aa1.58□□□□□ -2.16
SXM1YDR395W PUG1P40100 303 aa1.58□□□□□ -2.16
SXM1YDR395W SIP5P40210 489 aaKnown RBP1.58□□□□□ -2.16
SXM1YDR395W OSW5P40219 148 aa1.58□□□□□ -2.16
SXM1YDR395W KHA1P40309 873 aa1.58□□□□□ -2.16
SXM1YDR395W THI6P41835 540 aa1.58□□□□□ -2.16
SXM1YDR395W ALT1P52893 592 aa1.58□□□□□ -2.16
SXM1YDR395W TAN1P53072 289 aaPredicted RBP1.58□□□□□ -2.16
SXM1YDR395W TAM41P53230 385 aa1.58□□□□□ -2.16
SXM1YDR395W VPS75P53853 264 aa1.58□□□□□ -2.16
SXM1YDR395W JJJ1P53863 590 aa1.58□□□□□ -2.16
SXM1YDR395W ARP5P53946 755 aa1.58□□□□□ -2.16
SXM1YDR395W ENA2Q01896 1091 aa1.58□□□□□ -2.16
SXM1YDR395W TIF35Q04067 274 aaKnown RBP1.58□□□□□ -2.16
SXM1YDR395W ECM38Q05902 660 aaPredicted RBP1.58□□□□□ -2.16
SXM1YDR395W ADE13Q05911 482 aaKnown RBP1.58□□□□□ -2.16
SXM1YDR395W NBA1Q08229 501 aaKnown RBP1.58□□□□□ -2.16
SXM1YDR395W YPL272CQ08984 517 aa1.58□□□□□ -2.16
SXM1YDR395W RTC5Q12108 567 aaKnown RBP1.58□□□□□ -2.16
SXM1YDR395W NMD4Q12129 218 aa1.58□□□□□ -2.16
SXM1YDR395W KCS1Q12494 1050 aa1.58□□□□□ -2.16
SXM1YDR395W ENA5Q12691 1091 aa1.58□□□□□ -2.16
SXM1YDR395W STF1P01098 86 aa1.58□□□□□ -2.16
SXM1YDR395W BIK1P11709 440 aa1.58□□□□□ -2.16
SXM1YDR395W ADE2P21264 571 aaKnown RBP1.58□□□□□ -2.16
SXM1YDR395W ATP12P22135 325 aa1.58□□□□□ -2.16
SXM1YDR395W CAD1P24813 409 aaKnown RBP1.58□□□□□ -2.16
SXM1YDR395W PSO2P30620 661 aa1.58□□□□□ -2.16
SXM1YDR395W NAM7P30771 971 aaKnown RBP1.58□□□□□ -2.16
SXM1YDR395W GPI10P30777 616 aa1.58□□□□□ -2.16
SXM1YDR395W MLS1P30952 554 aa1.58□□□□□ -2.16
SXM1YDR395W FUN30P31380 1131 aa1.58□□□□□ -2.16
SXM1YDR395W HMX1P32339 317 aa1.58□□□□□ -2.16
SXM1YDR395W SPC110P32380 944 aa1.58□□□□□ -2.16
SXM1YDR395W HOG1P32485 435 aa1.58□□□□□ -2.16
SXM1YDR395W PUB1P32588 453 aaKnown RBP RIP-Chip data1.58□□□□□ -2.16not detected
SXM1YDR395W OAF3P36023 863 aa1.58□□□□□ -2.16
SXM1YDR395W LAS1P36146 502 aaPredicted RBP1.58□□□□□ -2.16
SXM1YDR395W MMS4P38257 691 aa1.58□□□□□ -2.16
SXM1YDR395W IFA38P38286 347 aa1.58□□□□□ -2.16
SXM1YDR395W YMR124WP39523 943 aaKnown RBP1.58□□□□□ -2.16
SXM1YDR395W MBP1P39678 833 aa1.58□□□□□ -2.16
SXM1YDR395W SPO22P40511 975 aa1.58□□□□□ -2.16
SXM1YDR395W MPH1P40562 993 aa1.58□□□□□ -2.16
SXM1YDR395W ALG2P43636 503 aa1.58□□□□□ -2.16
SXM1YDR395W STU2P46675 888 aa1.58□□□□□ -2.16
SXM1YDR395W TCB2P48231 1178 aa1.58□□□□□ -2.16
SXM1YDR395W AZR1P50080 613 aa1.58□□□□□ -2.16
SXM1YDR395W MON1P53129 644 aa1.58□□□□□ -2.16
SXM1YDR395W SGF73P53165 657 aa1.58□□□□□ -2.16
SXM1YDR395W MDR1P53258 950 aa1.58□□□□□ -2.16
SXM1YDR395W SFB2P53953 876 aa1.58□□□□□ -2.16
SXM1YDR395W ECM18Q04623 453 aa1.58□□□□□ -2.16
SXM1YDR395W GGA1Q06336 557 aa1.58□□□□□ -2.16
SXM1YDR395W CIR2Q08822 631 aa1.58□□□□□ -2.16
SXM1YDR395W HAL9Q12180 1030 aa1.58□□□□□ -2.16
SXM1YDR395W TAF3Q12297 353 aa1.58□□□□□ -2.16
SXM1YDR395W APC2Q12440 853 aa1.58□□□□□ -2.16
SXM1YDR395W FRE6Q12473 712 aa1.58□□□□□ -2.16
SXM1YDR395W LAA1P39526 2014 aa1.57□□□□□ -2.16
SXM1YDR395W ARG3P05150 338 aa1.57□□□□□ -2.16
SXM1YDR395W MET17P06106 444 aa1.57□□□□□ -2.16
SXM1YDR395W ADE3P07245 946 aaKnown RBP1.57□□□□□ -2.16
SXM1YDR395W HMG1P12683 1054 aa1.57□□□□□ -2.16
SXM1YDR395W MNE1P24720 663 aa1.57□□□□□ -2.16
SXM1YDR395W ADP1P25371 1049 aa1.57□□□□□ -2.16
SXM1YDR395W SPS22P25380 463 aa1.57□□□□□ -2.16
SXM1YDR395W MGM1P32266 881 aa1.57□□□□□ -2.16
SXM1YDR395W RME1P32338 300 aaKnown RBP1.57□□□□□ -2.16
SXM1YDR395W VPS17P32913 551 aa1.57□□□□□ -2.16
SXM1YDR395W TSA1P34760 196 aaKnown RBP1.57□□□□□ -2.16
SXM1YDR395W LRG1P35688 1017 aa1.57□□□□□ -2.16
SXM1YDR395W TFA2P36145 328 aa1.57□□□□□ -2.16
SXM1YDR395W MRPL40P36534 297 aa1.57□□□□□ -2.16
SXM1YDR395W REI1P38344 393 aaPredicted RBP1.57□□□□□ -2.16
SXM1YDR395W PAN5P38787 379 aa1.57□□□□□ -2.16
SXM1YDR395W MTW1P39731 289 aa1.57□□□□□ -2.16
SXM1YDR395W YEL068CP39977 110 aa1.57□□□□□ -2.16
SXM1YDR395W YIR014WP40570 242 aa1.57□□□□□ -2.16
SXM1YDR395W GTS1P40956 396 aa1.57□□□□□ -2.16
SXM1YDR395W SMK1P41808 388 aa1.57□□□□□ -2.16
SXM1YDR395W PXA1P41909 870 aa1.57□□□□□ -2.16
SXM1YDR395W IRC5P43610 853 aa1.57□□□□□ -2.16
SXM1YDR395W YGR283CP53336 341 aaPredicted RBP1.57□□□□□ -2.16
SXM1YDR395W KTR6P54070 446 aa1.57□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms