RNA–Protein interactions for RNA: YDR001C

NTH1, Transcript of Neutral trehalase, degrades trehalose, yeast

Gene NTH1, Length 2,256 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NTH1	YDR001C	SYG1	P40528	902 aa		4.2	□□□□□ -1.74
NTH1	YDR001C	YJL163C	P46996	555 aa		4.2	□□□□□ -1.74
NTH1	YDR001C	BNA1	P47096	177 aa		4.2	□□□□□ -1.74
NTH1	YDR001C	GTR1	Q00582	310 aa		4.2	□□□□□ -1.74
NTH1	YDR001C	BLS1	Q06071	122 aa		4.2	□□□□□ -1.74
NTH1	YDR001C	APL4	Q12028	832 aa		4.2	□□□□□ -1.74
NTH1	YDR001C	HOS1	Q12214	470 aa		4.2	□□□□□ -1.74
NTH1	YDR001C	NUP188	P52593	1655 aa	Known RBP	4.2	□□□□□ -1.74
NTH1	YDR001C	PET122	P10355	254 aa		4.2	□□□□□ -1.74
NTH1	YDR001C	POL3	P15436	1097 aa		4.2	□□□□□ -1.74
NTH1	YDR001C	RME1	P32338	300 aa	Known RBP	4.2	□□□□□ -1.74
NTH1	YDR001C	MVD1	P32377	396 aa	Known RBP	4.2	□□□□□ -1.74
NTH1	YDR001C	HSM3	P38348	480 aa		4.2	□□□□□ -1.74
NTH1	YDR001C	GVP36	P40531	326 aa	Known RBP	4.2	□□□□□ -1.74
NTH1	YDR001C	PAN2	P53010	1115 aa	Predicted RBP	4.2	□□□□□ -1.74
NTH1	YDR001C	FDC1	Q03034	503 aa		4.2	□□□□□ -1.74
NTH1	YDR001C	WAR1	Q03631	944 aa		4.2	□□□□□ -1.74
NTH1	YDR001C	YDR341C	Q05506	607 aa	Known RBP	4.2	□□□□□ -1.74
NTH1	YDR001C	MRD1	Q06106	887 aa	Known RBP	4.2	□□□□□ -1.74
NTH1	YDR001C	ARR3	Q06598	404 aa		4.2	□□□□□ -1.74
NTH1	YDR001C	VAM6	Q07468	1049 aa		4.2	□□□□□ -1.74
NTH1	YDR001C	SLK19	Q08581	821 aa	Known RBP	4.2	□□□□□ -1.74
NTH1	YDR001C	CTI6	Q08923	506 aa		4.2	□□□□□ -1.74
NTH1	YDR001C	BRR1	Q99177	341 aa	Predicted RBP	4.2	□□□□□ -1.74
NTH1	YDR001C	UTP10	P42945	1769 aa	Known RBP	4.19	□□□□□ -1.74
NTH1	YDR001C	RAD1	P06777	1100 aa		4.19	□□□□□ -1.74
NTH1	YDR001C	ADE3	P07245	946 aa	Known RBP	4.19	□□□□□ -1.74
NTH1	YDR001C	MET3	P08536	511 aa		4.19	□□□□□ -1.74
NTH1	YDR001C	SIR1	P21691	654 aa		4.19	□□□□□ -1.74
NTH1	YDR001C	SEC15	P22224	910 aa		4.19	□□□□□ -1.74
NTH1	YDR001C	YCR015C	P25616	317 aa		4.19	□□□□□ -1.74
NTH1	YDR001C	RPC19	P28000	142 aa	Known RBP	4.19	□□□□□ -1.74
NTH1	YDR001C	FRD1	P32614	470 aa	Known RBP	4.19	□□□□□ -1.74
NTH1	YDR001C	KDX1	P36005	433 aa		4.19	□□□□□ -1.74
NTH1	YDR001C	SFB3	P38810	929 aa		4.19	□□□□□ -1.74
NTH1	YDR001C	STB1	P42845	420 aa		4.19	□□□□□ -1.74
NTH1	YDR001C	GSM1	P42950	618 aa		4.19	□□□□□ -1.74
NTH1	YDR001C	MIC19	P43594	170 aa		4.19	□□□□□ -1.74
NTH1	YDR001C	MDR1	P53258	950 aa		4.19	□□□□□ -1.74
NTH1	YDR001C	CAF130	P53280	1122 aa	Predicted RBP	4.19	□□□□□ -1.74
NTH1	YDR001C	ALF1	P53904	254 aa		4.19	□□□□□ -1.74
NTH1	YDR001C	YML108W	Q03759	105 aa		4.19	□□□□□ -1.74
NTH1	YDR001C	TMA64	Q04600	565 aa	Known RBP	4.19	□□□□□ -1.74
NTH1	YDR001C	YLR177W	Q06251	628 aa		4.19	□□□□□ -1.74
NTH1	YDR001C	AAD4	Q07747	329 aa		4.19	□□□□□ -1.74
NTH1	YDR001C	DNL4	Q08387	944 aa	Predicted RBP	4.19	□□□□□ -1.74
NTH1	YDR001C	BUD7	Q08754	746 aa		4.19	□□□□□ -1.74
NTH1	YDR001C	PHO5	P00635	467 aa		4.19	□□□□□ -1.74
NTH1	YDR001C	GPA1	P08539	472 aa		4.19	□□□□□ -1.74
NTH1	YDR001C	HIR2	P32480	875 aa		4.19	□□□□□ -1.74
NTH1	YDR001C	PSY4	P38193	441 aa		4.19	□□□□□ -1.74
NTH1	YDR001C	OSH3	P38713	996 aa	Known RBP	4.19	□□□□□ -1.74
NTH1	YDR001C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
NTH1	YDR001C	BUD16	P39988	312 aa		4.19	□□□□□ -1.74
NTH1	YDR001C	POL31	P46957	487 aa		4.19	□□□□□ -1.74
NTH1	YDR001C	VPS75	P53853	264 aa		4.19	□□□□□ -1.74
NTH1	YDR001C	CLU1	Q03690	1277 aa	Known RBP	4.19	□□□□□ -1.74
NTH1	YDR001C	ERB1	Q04660	807 aa	Known RBP	4.19	□□□□□ -1.74
NTH1	YDR001C	TFC6	Q06339	672 aa		4.19	□□□□□ -1.74
NTH1	YDR001C	IWR1	Q07532	353 aa	Predicted RBP	4.19	□□□□□ -1.74
NTH1	YDR001C	FRE5	Q08908	694 aa		4.19	□□□□□ -1.74
NTH1	YDR001C	CLF1	Q12309	687 aa	Predicted RBP	4.19	□□□□□ -1.74
NTH1	YDR001C	ZRT2	Q12436	422 aa		4.19	□□□□□ -1.74
NTH1	YDR001C	APC2	Q12440	853 aa		4.19	□□□□□ -1.74
NTH1	YDR001C	ERG4	P25340	473 aa		4.18	□□□□□ -1.74
NTH1	YDR001C	CDC15	P27636	974 aa		4.18	□□□□□ -1.74
NTH1	YDR001C	NPL6	P32832	435 aa		4.18	□□□□□ -1.74
NTH1	YDR001C	YNG2	P38806	282 aa	Known RBP	4.18	□□□□□ -1.74
NTH1	YDR001C	KHA1	P40309	873 aa		4.18	□□□□□ -1.74
NTH1	YDR001C	GPD2	P41911	440 aa	Known RBP	4.18	□□□□□ -1.74
NTH1	YDR001C	AVT1	P47082	602 aa		4.18	□□□□□ -1.74
NTH1	YDR001C	YPT11	P48559	417 aa		4.18	□□□□□ -1.74
NTH1	YDR001C	RBL2	P48606	106 aa	Known RBP	4.18	□□□□□ -1.74
NTH1	YDR001C	UBA2	P52488	636 aa		4.18	□□□□□ -1.74
NTH1	YDR001C	LSC1	P53598	329 aa	Known RBP	4.18	□□□□□ -1.74
NTH1	YDR001C	YKR005C	Q02203	525 aa		4.18	□□□□□ -1.74
NTH1	YDR001C	PLP1	Q04004	230 aa		4.18	□□□□□ -1.74
NTH1	YDR001C	YMR111C	Q04461	462 aa	Predicted RBP	4.18	□□□□□ -1.74
NTH1	YDR001C	YKL033W-A	Q86ZR7	236 aa		4.18	□□□□□ -1.74
NTH1	YDR001C	JIP3	O13555	125 aa		4.18	□□□□□ -1.74
NTH1	YDR001C	TUF1	P02992	437 aa	Known RBP	4.18	□□□□□ -1.74
NTH1	YDR001C	SIR3	P06701	978 aa		4.18	□□□□□ -1.74
NTH1	YDR001C	MTF2	P10849	440 aa		4.18	□□□□□ -1.74
NTH1	YDR001C	RPA135	P22138	1203 aa	Known RBP	4.18	□□□□□ -1.74
NTH1	YDR001C	PRP28	P23394	588 aa		4.18	□□□□□ -1.74
NTH1	YDR001C	SWI4	P25302	1093 aa	Known RBP	4.18	□□□□□ -1.74
NTH1	YDR001C	YCL049C	P25577	312 aa		4.18	□□□□□ -1.74
NTH1	YDR001C	GSY2	P27472	705 aa		4.18	□□□□□ -1.74
NTH1	YDR001C	EFT1	P32324	842 aa	Known RBP	4.18	□□□□□ -1.74
NTH1	YDR001C	RIB7	P33312	244 aa		4.18	□□□□□ -1.74
NTH1	YDR001C	LOS1	P33418	1100 aa	Predicted RBP	4.18	□□□□□ -1.74
NTH1	YDR001C	YBR138C	P38277	524 aa		4.18	□□□□□ -1.74
NTH1	YDR001C	YER130C	P39959	443 aa		4.18	□□□□□ -1.74
NTH1	YDR001C	TMN3	P40071	706 aa		4.18	□□□□□ -1.74
NTH1	YDR001C	INA22	P40576	216 aa		4.18	□□□□□ -1.74
NTH1	YDR001C	IML2	P47031	731 aa		4.18	□□□□□ -1.74
NTH1	YDR001C	FHN1	P53279	174 aa		4.18	□□□□□ -1.74
NTH1	YDR001C	COP1	P53622	1201 aa	Known RBP	4.18	□□□□□ -1.74
NTH1	YDR001C	ADA2	Q02336	434 aa		4.18	□□□□□ -1.74
NTH1	YDR001C	CRD1	Q07560	283 aa		4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms