RNA–Protein interactions for RNA: YDL212W

SHR3, Transcript of Endoplasmic reticulum packaging chaperone, yeastyeast

Gene SHR3, Length 633 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR3YDL212W TRS130Q03660 1102 aa4.67□□□□□ -1.66
SHR3YDL212W TDA9Q04545 1251 aa4.67□□□□□ -1.66
SHR3YDL212W PDR8Q06149 701 aa4.67□□□□□ -1.66
SHR3YDL212W VAM6Q07468 1049 aa4.67□□□□□ -1.66
SHR3YDL212W TOM71P38825 639 aaKnown RBP4.66□□□□□ -1.66
SHR3YDL212W ACA1P39970 489 aa4.66□□□□□ -1.66
SHR3YDL212W YPT11P48559 417 aa4.66□□□□□ -1.66
SHR3YDL212W MRPL1Q04599 285 aa4.66□□□□□ -1.66
SHR3YDL212W ECM22Q05958 814 aaPredicted RBP4.66□□□□□ -1.66
SHR3YDL212W ATX2Q12067 313 aa4.66□□□□□ -1.66
SHR3YDL212W PUF2Q12221 1075 aaKnown RBP RIP-Chip data4.66□□□□□ -1.66not detected
SHR3YDL212W YER145C-AA0A023PYF4 145 aa4.65□□□□□ -1.67
SHR3YDL212W LRE1P25579 583 aaKnown RBP4.65□□□□□ -1.67
SHR3YDL212W MSS51P32335 436 aa4.65□□□□□ -1.67
SHR3YDL212W OCT1P35999 772 aa4.65□□□□□ -1.67
SHR3YDL212W PHM8P40025 321 aa4.65□□□□□ -1.67
SHR3YDL212W TPA1P40032 644 aaKnown RBP4.65□□□□□ -1.67
SHR3YDL212W SKP2P42843 763 aa4.65□□□□□ -1.67
SHR3YDL212W UBX4P54730 416 aa4.65□□□□□ -1.67
SHR3YDL212W BAG7Q12128 409 aa4.65□□□□□ -1.67
SHR3YDL212W PCD1Q12524 340 aa4.65□□□□□ -1.67
SHR3YDL212W GPA1P08539 472 aa4.64□□□□□ -1.67
SHR3YDL212W PHO81P17442 1178 aa4.64□□□□□ -1.67
SHR3YDL212W YCL049CP25577 312 aa4.64□□□□□ -1.67
SHR3YDL212W GCD7P32502 381 aaPredicted RBP4.64□□□□□ -1.67
SHR3YDL212W PXL1P36166 706 aa4.64□□□□□ -1.67
SHR3YDL212W MDV1P47025 714 aa4.64□□□□□ -1.67
SHR3YDL212W YGL036WP53185 909 aaPredicted RBP4.64□□□□□ -1.67
SHR3YDL212W PIG1Q06216 648 aa4.64□□□□□ -1.67
SHR3YDL212W MSM1P22438 575 aa4.63□□□□□ -1.67
SHR3YDL212W ATO2P32907 282 aa4.63□□□□□ -1.67
SHR3YDL212W YIL152WP40455 235 aa4.63□□□□□ -1.67
SHR3YDL212W DJP1P40564 432 aa4.63□□□□□ -1.67
SHR3YDL212W YIR016WP40572 265 aa4.63□□□□□ -1.67
SHR3YDL212W TFC6Q06339 672 aa4.63□□□□□ -1.67
SHR3YDL212W ATG23Q06671 453 aa4.63□□□□□ -1.67
SHR3YDL212W MCH4Q08268 501 aa4.63□□□□□ -1.67
SHR3YDL212W PGI1P12709 554 aaKnown RBP4.62□□□□□ -1.67
SHR3YDL212W YCR006CP25350 157 aa4.62□□□□□ -1.67
SHR3YDL212W ADE17P38009 592 aaKnown RBP4.62□□□□□ -1.67
SHR3YDL212W SCO2P38072 301 aa4.62□□□□□ -1.67
SHR3YDL212W YJR008WP47085 338 aa4.62□□□□□ -1.67
SHR3YDL212W SCS3P53012 380 aa4.62□□□□□ -1.67
SHR3YDL212W YNL144CP53907 740 aa4.62□□□□□ -1.67
SHR3YDL212W FRE3Q08905 711 aa4.62□□□□□ -1.67
SHR3YDL212W RPL42AP0CX27 106 aaKnown RBP4.61□□□□□ -1.67
SHR3YDL212W RPL42BP0CX28 106 aaKnown RBP4.61□□□□□ -1.67
SHR3YDL212W SRP54P20424 541 aaKnown RBP4.61□□□□□ -1.67
SHR3YDL212W UBP13P38187 747 aa4.61□□□□□ -1.67
SHR3YDL212W IFA38P38286 347 aa4.61□□□□□ -1.67
SHR3YDL212W SNA4Q07549 140 aa4.61□□□□□ -1.67
SHR3YDL212W SWT1Q12104 458 aa4.61□□□□□ -1.67
SHR3YDL212W ATP2P00830 511 aaKnown RBP4.6□□□□□ -1.67
SHR3YDL212W SUI3P09064 285 aaKnown RBP4.6□□□□□ -1.67
SHR3YDL212W CSL4P53859 292 aaPredicted RBP4.6□□□□□ -1.67
SHR3YDL212W YLR455WQ06188 304 aa4.6□□□□□ -1.67
SHR3YDL212W SWA2Q06677 668 aa4.6□□□□□ -1.67
SHR3YDL212W MLH2Q07980 695 aa4.6□□□□□ -1.67
SHR3YDL212W COX17Q12287 69 aa4.6□□□□□ -1.67
SHR3YDL212W MTF2P10849 440 aa4.59□□□□□ -1.67
SHR3YDL212W YCR043CP25361 127 aa4.59□□□□□ -1.67
SHR3YDL212W PSF2P40359 213 aa4.59□□□□□ -1.67
SHR3YDL212W ASG1P40467 964 aa4.59□□□□□ -1.67
SHR3YDL212W RRT6P53117 311 aaPredicted RBP4.59□□□□□ -1.67
SHR3YDL212W PAP2P53632 584 aaKnown RBP4.59□□□□□ -1.67
SHR3YDL212W CAC2Q04199 468 aa4.59□□□□□ -1.67
SHR3YDL212W YMR034CQ05131 434 aaPredicted RBP4.59□□□□□ -1.67
SHR3YDL212W GSH2Q08220 491 aa4.59□□□□□ -1.67
SHR3YDL212W DSE3Q08729 430 aa4.59□□□□□ -1.67
SHR3YDL212W YLR112WQ12130 139 aa4.59□□□□□ -1.67
SHR3YDL212W UBX3Q12229 455 aa4.59□□□□□ -1.67
SHR3YDL212W CHO1P08456 276 aa4.58□□□□□ -1.68
SHR3YDL212W PET111P08468 800 aa4.58□□□□□ -1.68
SHR3YDL212W TY2A-LR1P0C2J4 438 aa4.58□□□□□ -1.68
SHR3YDL212W TY2A-FP0CX61 438 aa4.58□□□□□ -1.68
SHR3YDL212W TY2A-GR2P0CX62 438 aa4.58□□□□□ -1.68
SHR3YDL212W YFL068WP0CX99 160 aa4.58□□□□□ -1.68
SHR3YDL212W YLL066W-AP0CY00 160 aa4.58□□□□□ -1.68
SHR3YDL212W YLL067W-AP0CY01 160 aa4.58□□□□□ -1.68
SHR3YDL212W TY2A-CP25383 438 aa4.58□□□□□ -1.68
SHR3YDL212W YUR1P26725 428 aa4.58□□□□□ -1.68
SHR3YDL212W DBF20P32328 564 aa4.58□□□□□ -1.68
SHR3YDL212W SWP82P43554 623 aa4.58□□□□□ -1.68
SHR3YDL212W COG1P53079 417 aa4.58□□□□□ -1.68
SHR3YDL212W TY2A-DR2Q03483 438 aa4.58□□□□□ -1.68
SHR3YDL212W SRL1Q08673 210 aa4.58□□□□□ -1.68
SHR3YDL212W TY2A-BQ12260 438 aa4.58□□□□□ -1.68
SHR3YDL212W TY2A-OR2Q12293 438 aa4.58□□□□□ -1.68
SHR3YDL212W TY2A-DR1Q12392 438 aa4.58□□□□□ -1.68
SHR3YDL212W TY2A-OR1Q12439 438 aa4.58□□□□□ -1.68
SHR3YDL212W TY2A-DR3Q99303 438 aa4.58□□□□□ -1.68
SHR3YDL212W NUC1P08466 329 aa4.57□□□□□ -1.68
SHR3YDL212W MRP2P10663 115 aaPredicted RBP4.57□□□□□ -1.68
SHR3YDL212W UBC1P21734 215 aaKnown RBP4.57□□□□□ -1.68
SHR3YDL212W ARC40P38328 384 aaKnown RBP4.57□□□□□ -1.68
SHR3YDL212W NPR3P38742 1146 aa4.57□□□□□ -1.68
SHR3YDL212W YIL161WP40449 235 aaKnown RBP4.57□□□□□ -1.68
SHR3YDL212W MEP2P41948 499 aa4.57□□□□□ -1.68
SHR3YDL212W BOP3P53958 396 aa4.57□□□□□ -1.68
SHR3YDL212W ASI1P54074 624 aa4.57□□□□□ -1.68
Retrieved 100 of 5,963 RNA–protein pairs in 30.9 ms