RNA–Protein interactions for RNA: YPR134W

MSS18, Transcript of Nuclear encoded protein needed for splicing of mitochondrial intron, yeast

Gene MSS18, Length 807 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSS18	YPR134W	HOS1	Q12214	470 aa		3.15	□□□□□ -1.91
MSS18	YPR134W	UBX3	Q12229	455 aa		3.15	□□□□□ -1.91
MSS18	YPR134W	IRC20	Q06554	1556 aa		3.15	□□□□□ -1.91
MSS18	YPR134W	HAP1	P0CE41	1502 aa		3.14	□□□□□ -1.91
MSS18	YPR134W	MAK32	P23060	363 aa		3.14	□□□□□ -1.91
MSS18	YPR134W	YCP4	P25349	247 aa	Known RBP	3.14	□□□□□ -1.91
MSS18	YPR134W	RPT3	P33298	428 aa	Known RBP	3.14	□□□□□ -1.91
MSS18	YPR134W	KES1	P35844	434 aa	Known RBP	3.14	□□□□□ -1.91
MSS18	YPR134W	SSP120	P39931	234 aa	Known RBP	3.14	□□□□□ -1.91
MSS18	YPR134W	RPL15B	P54780	204 aa	Predicted RBP	3.14	□□□□□ -1.91
MSS18	YPR134W	YOR389W	Q08912	624 aa		3.14	□□□□□ -1.91
MSS18	YPR134W	GET3	Q12154	354 aa	Known RBP	3.14	□□□□□ -1.91
MSS18	YPR134W	SCO2	P38072	301 aa		3.13	□□□□□ -1.91
MSS18	YPR134W	FLO5	P38894	1075 aa		3.13	□□□□□ -1.91
MSS18	YPR134W	CIN1	P40987	1014 aa		3.13	□□□□□ -1.91
MSS18	YPR134W	GPG1	P53130	126 aa		3.13	□□□□□ -1.91
MSS18	YPR134W	YNL092W	P53934	400 aa		3.13	□□□□□ -1.91
MSS18	YPR134W	PLM2	Q04383	521 aa		3.13	□□□□□ -1.91
MSS18	YPR134W	SNA4	Q07549	140 aa		3.13	□□□□□ -1.91
MSS18	YPR134W	NUP157	P40064	1391 aa	Known RBP	3.12	□□□□□ -1.91
MSS18	YPR134W	DNF2	Q12675	1612 aa		3.12	□□□□□ -1.91
MSS18	YPR134W	GEA1	P47102	1408 aa	Predicted RBP	3.12	□□□□□ -1.91
MSS18	YPR134W	KGD2	P19262	463 aa	Predicted RBP	3.12	□□□□□ -1.91
MSS18	YPR134W	EMP65	P40085	556 aa		3.12	□□□□□ -1.91
MSS18	YPR134W	IDS2	P46958	469 aa		3.12	□□□□□ -1.91
MSS18	YPR134W	LYS20	P48570	428 aa	Known RBP	3.12	□□□□□ -1.91
MSS18	YPR134W	COS12	P53053	380 aa		3.12	□□□□□ -1.91
MSS18	YPR134W	HOL1	P53389	586 aa		3.12	□□□□□ -1.91
MSS18	YPR134W	DSE3	Q08729	430 aa		3.12	□□□□□ -1.91
MSS18	YPR134W	LYS21	Q12122	440 aa	Known RBP	3.12	□□□□□ -1.91
MSS18	YPR134W	CHC1	P22137	1653 aa	Known RBP	3.11	□□□□□ -1.91
MSS18	YPR134W	ATP12	P22135	325 aa		3.11	□□□□□ -1.91
MSS18	YPR134W	PRP45	P28004	379 aa	Predicted RBP	3.11	□□□□□ -1.91
MSS18	YPR134W	SWC3	P31376	625 aa		3.11	□□□□□ -1.91
MSS18	YPR134W	PET309	P32522	965 aa	Predicted RBP	3.11	□□□□□ -1.91
MSS18	YPR134W	IMD2	P38697	523 aa	Known RBP	3.11	□□□□□ -1.91
MSS18	YPR134W	RTT107	P38850	1070 aa		3.11	□□□□□ -1.91
MSS18	YPR134W	GPP2	P40106	250 aa	Known RBP	3.11	□□□□□ -1.91
MSS18	YPR134W	MAF1	P41910	395 aa		3.11	□□□□□ -1.91
MSS18	YPR134W	YJR142W	P47173	342 aa		3.11	□□□□□ -1.91
MSS18	YPR134W	IMD3	P50095	523 aa	Known RBP	3.11	□□□□□ -1.91
MSS18	YPR134W	MNT2	P53059	558 aa		3.11	□□□□□ -1.91
MSS18	YPR134W	SPC105	P53148	917 aa		3.11	□□□□□ -1.91
MSS18	YPR134W	UBP16	Q02863	499 aa		3.11	□□□□□ -1.91
MSS18	YPR134W	YOR378W	Q08902	515 aa		3.11	□□□□□ -1.91
MSS18	YPR134W	YPL191C	Q08930	360 aa		3.11	□□□□□ -1.91
MSS18	YPR134W	LCB4	Q12246	624 aa		3.11	□□□□□ -1.91
MSS18	YPR134W	ARG1	P22768	420 aa		3.1	□□□□□ -1.91
MSS18	YPR134W	ORC5	P50874	479 aa		3.1	□□□□□ -1.91
MSS18	YPR134W	SLD3	P53135	668 aa		3.1	□□□□□ -1.91
MSS18	YPR134W	YGL081W	P53156	320 aa		3.1	□□□□□ -1.91
MSS18	YPR134W	YLR281C	Q05863	155 aa		3.1	□□□□□ -1.91
MSS18	YPR134W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	3.1	□□□□□ -1.91	not detected
MSS18	YPR134W	YER175W-A	Q8TGU4	54 aa		3.1	□□□□□ -1.91
MSS18	YPR134W	SRB8	P25648	1427 aa		3.1	□□□□□ -1.91
MSS18	YPR134W	YPT1	P01123	206 aa	Known RBP	3.09	□□□□□ -1.91
MSS18	YPR134W	AMD2	P22580	549 aa		3.09	□□□□□ -1.91
MSS18	YPR134W	RRP43	P25359	394 aa	Predicted RBP	3.09	□□□□□ -1.91
MSS18	YPR134W	SER1	P33330	395 aa	Known RBP	3.09	□□□□□ -1.91
MSS18	YPR134W	STL1	P39932	569 aa		3.09	□□□□□ -1.91
MSS18	YPR134W	YAT1	P80235	687 aa		3.09	□□□□□ -1.91
MSS18	YPR134W	TRI1	Q05024	226 aa		3.09	□□□□□ -1.91
MSS18	YPR134W	YDL242W	Q07746	117 aa		3.09	□□□□□ -1.91
MSS18	YPR134W	CWC2	Q12046	339 aa	Predicted RBP	3.09	□□□□□ -1.91
MSS18	YPR134W	YBT1	P32386	1661 aa		3.08	□□□□□ -1.92
MSS18	YPR134W	URA3	P03962	267 aa		3.08	□□□□□ -1.92
MSS18	YPR134W	COX11	P19516	300 aa	Known RBP	3.08	□□□□□ -1.92
MSS18	YPR134W	CNA1	P23287	553 aa		3.08	□□□□□ -1.92
MSS18	YPR134W	MSS51	P32335	436 aa		3.08	□□□□□ -1.92
MSS18	YPR134W	RPF2	P36160	344 aa	Known RBP	3.08	□□□□□ -1.92
MSS18	YPR134W	YAP3	P38749	330 aa		3.08	□□□□□ -1.92
MSS18	YPR134W	SAP1	P39955	897 aa	Known RBP	3.08	□□□□□ -1.92
MSS18	YPR134W	GSM1	P42950	618 aa		3.08	□□□□□ -1.92
MSS18	YPR134W	YNL144C	P53907	740 aa		3.08	□□□□□ -1.92
MSS18	YPR134W	YML119W	Q03208	357 aa		3.08	□□□□□ -1.92
MSS18	YPR134W	RAD34	Q06665	692 aa		3.08	□□□□□ -1.92
MSS18	YPR134W	TRE2	Q08693	809 aa		3.08	□□□□□ -1.92
MSS18	YPR134W	RRI1	Q12468	440 aa		3.08	□□□□□ -1.92
MSS18	YPR134W	RTC1	Q08281	1341 aa		3.08	□□□□□ -1.92
MSS18	YPR134W	CTT1	P06115	562 aa		3.07	□□□□□ -1.92
MSS18	YPR134W	YCR061W	P25639	631 aa		3.07	□□□□□ -1.92
MSS18	YPR134W	TAF5	P38129	798 aa		3.07	□□□□□ -1.92
MSS18	YPR134W	GND1	P38720	489 aa	Known RBP	3.07	□□□□□ -1.92
MSS18	YPR134W	YIL152W	P40455	235 aa		3.07	□□□□□ -1.92
MSS18	YPR134W	YJL107C	P42947	387 aa		3.07	□□□□□ -1.92
MSS18	YPR134W	NIT2	P47016	307 aa		3.07	□□□□□ -1.92
MSS18	YPR134W	MLH2	Q07980	695 aa		3.07	□□□□□ -1.92
MSS18	YPR134W	PEX15	Q08215	383 aa		3.07	□□□□□ -1.92
MSS18	YPR134W	NDD1	Q08887	554 aa		3.07	□□□□□ -1.92
MSS18	YPR134W	IKI3	Q06706	1349 aa	Known RBP	3.07	□□□□□ -1.92
MSS18	YPR134W	ARO1	P08566	1588 aa	Known RBP	3.07	□□□□□ -1.92
MSS18	YPR134W	YOR093C	Q12275	1648 aa		3.07	□□□□□ -1.92
MSS18	YPR134W	ILV2	P07342	687 aa	Known RBP	3.06	□□□□□ -1.92
MSS18	YPR134W	RKM3	P38222	552 aa		3.06	□□□□□ -1.92
MSS18	YPR134W	VBA2	P38358	474 aa	Known RBP	3.06	□□□□□ -1.92
MSS18	YPR134W	ARN1	P38731	627 aa		3.06	□□□□□ -1.92
MSS18	YPR134W	VFA1	P40080	203 aa		3.06	□□□□□ -1.92
MSS18	YPR134W	MAD2	P40958	196 aa		3.06	□□□□□ -1.92
MSS18	YPR134W	YPT11	P48559	417 aa		3.06	□□□□□ -1.92
MSS18	YPR134W	YNR071C	P53757	342 aa		3.06	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms