RNA–Protein interactions for RNA: YPL047W

SGF11, Transcript of Integral subunit of SAGA histone acetyltransferase complex, yeastyeast

Gene SGF11, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGF11YPL047W UBP8P50102 471 aa1.66□□□□□ -2.14
SGF11YPL047W PSP1P50896 841 aaKnown RBP1.66□□□□□ -2.14
SGF11YPL047W ALG12P53730 551 aa1.66□□□□□ -2.14
SGF11YPL047W IZH1Q03419 316 aa1.66□□□□□ -2.14
SGF11YPL047W UTP14Q04500 899 aaKnown RBP1.66□□□□□ -2.14
SGF11YPL047W FAP7Q12055 197 aaPredicted RBP1.66□□□□□ -2.14
SGF11YPL047W YLR112WQ12130 139 aa1.66□□□□□ -2.14
SGF11YPL047W URA3P03962 267 aa1.65□□□□□ -2.15
SGF11YPL047W YCR061WP25639 631 aa1.65□□□□□ -2.15
SGF11YPL047W PET309P32522 965 aaPredicted RBP1.65□□□□□ -2.15
SGF11YPL047W SER1P33330 395 aaKnown RBP1.65□□□□□ -2.15
SGF11YPL047W TPA1P40032 644 aaKnown RBP1.65□□□□□ -2.15
SGF11YPL047W GPP1P41277 250 aaKnown RBP1.65□□□□□ -2.15
SGF11YPL047W IMP4P53941 290 aaKnown RBP1.65□□□□□ -2.15
SGF11YPL047W SKY1Q03656 742 aa1.65□□□□□ -2.15
SGF11YPL047W CRF1Q04930 467 aa1.65□□□□□ -2.15
SGF11YPL047W ECI1Q05871 280 aa1.65□□□□□ -2.15
SGF11YPL047W POS5Q06892 414 aa1.65□□□□□ -2.15
SGF11YPL047W RSA1Q08932 381 aa1.65□□□□□ -2.15
SGF11YPL047W LEA1Q08963 238 aaPredicted RBP1.65□□□□□ -2.15
SGF11YPL047W CWC2Q12046 339 aaPredicted RBP1.65□□□□□ -2.15
SGF11YPL047W CYB2P00175 591 aa1.64□□□□□ -2.15
SGF11YPL047W CTT1P06115 562 aa1.64□□□□□ -2.15
SGF11YPL047W YML002WP0CF17 737 aa1.64□□□□□ -2.15
SGF11YPL047W CDC23P16522 626 aa1.64□□□□□ -2.15
SGF11YPL047W EXO84P38261 753 aa1.64□□□□□ -2.15
SGF11YPL047W VFA1P40080 203 aa1.64□□□□□ -2.15
SGF11YPL047W YJL070CP40361 888 aa1.64□□□□□ -2.15
SGF11YPL047W UBP7P40453 1071 aa1.64□□□□□ -2.15
SGF11YPL047W ASG1P40467 964 aa1.64□□□□□ -2.15
SGF11YPL047W GSM1P42950 618 aa1.64□□□□□ -2.15
SGF11YPL047W YGL036WP53185 909 aaPredicted RBP1.64□□□□□ -2.15
SGF11YPL047W CUL3P53202 744 aa1.64□□□□□ -2.15
SGF11YPL047W YMR254CQ04838 102 aa1.64□□□□□ -2.15
SGF11YPL047W YLR352WQ06479 807 aa1.64□□□□□ -2.15
SGF11YPL047W MCH4Q08268 501 aa1.64□□□□□ -2.15
SGF11YPL047W RMP1Q12530 201 aa1.64□□□□□ -2.15
SGF11YPL047W YTA7P40340 1379 aa1.63□□□□□ -2.15
SGF11YPL047W SAN1P22470 610 aa1.63□□□□□ -2.15
SGF11YPL047W PRE2P30656 287 aaKnown RBP1.63□□□□□ -2.15
SGF11YPL047W DAL3P32459 195 aa1.63□□□□□ -2.15
SGF11YPL047W VPS41P38959 992 aa1.63□□□□□ -2.15
SGF11YPL047W YPR003CP53394 754 aa1.63□□□□□ -2.15
SGF11YPL047W YNR071CP53757 342 aa1.63□□□□□ -2.15
SGF11YPL047W ESBP6P53918 673 aa1.63□□□□□ -2.15
SGF11YPL047W CAC2Q04199 468 aa1.63□□□□□ -2.15
SGF11YPL047W SWF1Q04629 336 aa1.63□□□□□ -2.15
SGF11YPL047W ARP9Q05123 467 aa1.63□□□□□ -2.15
SGF11YPL047W PIG1Q06216 648 aa1.63□□□□□ -2.15
SGF11YPL047W APL5Q08951 932 aaKnown RBP1.63□□□□□ -2.15
SGF11YPL047W PMS1P14242 873 aa1.62□□□□□ -2.15
SGF11YPL047W HNM1P19807 563 aa1.62□□□□□ -2.15
SGF11YPL047W YCR006CP25350 157 aa1.62□□□□□ -2.15
SGF11YPL047W PRP45P28004 379 aaPredicted RBP1.62□□□□□ -2.15
SGF11YPL047W SEC1P30619 724 aaKnown RBP1.62□□□□□ -2.15
SGF11YPL047W PRO3P32263 286 aaKnown RBP1.62□□□□□ -2.15
SGF11YPL047W RAD24P32641 659 aa1.62□□□□□ -2.15
SGF11YPL047W STL1P39932 569 aa1.62□□□□□ -2.15
SGF11YPL047W EAF5P39995 279 aa1.62□□□□□ -2.15
SGF11YPL047W MAD2P40958 196 aa1.62□□□□□ -2.15
SGF11YPL047W CDC1P40986 491 aa1.62□□□□□ -2.15
SGF11YPL047W YGR237CP50089 785 aa1.62□□□□□ -2.15
SGF11YPL047W GPG1P53130 126 aa1.62□□□□□ -2.15
SGF11YPL047W SPC105P53148 917 aa1.62□□□□□ -2.15
SGF11YPL047W RTK1Q12100 620 aaPredicted RBP1.62□□□□□ -2.15
SGF11YPL047W CBP1P07252 654 aa1.61□□□□□ -2.15
SGF11YPL047W REV1P12689 985 aa1.61□□□□□ -2.15
SGF11YPL047W PDE1P22434 369 aa1.61□□□□□ -2.15
SGF11YPL047W CPR3P25719 182 aa1.61□□□□□ -2.15
SGF11YPL047W LAC1P28496 418 aa1.61□□□□□ -2.15
SGF11YPL047W EFM2P38347 419 aa1.61□□□□□ -2.15
SGF11YPL047W ERC1P38767 581 aa1.61□□□□□ -2.15
SGF11YPL047W SSP120P39931 234 aaKnown RBP1.61□□□□□ -2.15
SGF11YPL047W ARB1P40024 610 aaKnown RBP1.61□□□□□ -2.15
SGF11YPL047W ATG27P46989 271 aa1.61□□□□□ -2.15
SGF11YPL047W NPA3P47122 385 aa1.61□□□□□ -2.15
SGF11YPL047W HOL1P53389 586 aa1.61□□□□□ -2.15
SGF11YPL047W YNR029CP53729 429 aaKnown RBP1.61□□□□□ -2.15
SGF11YPL047W EAF7P53911 425 aaKnown RBP1.61□□□□□ -2.15
SGF11YPL047W TRS31Q03337 283 aa1.61□□□□□ -2.15
SGF11YPL047W DIN7Q12086 430 aa1.61□□□□□ -2.15
SGF11YPL047W GUK1P15454 187 aaKnown RBP1.6□□□□□ -2.15
SGF11YPL047W RPN2P32565 945 aaKnown RBP1.6□□□□□ -2.15
SGF11YPL047W TRS65P32893 560 aa1.6□□□□□ -2.15
SGF11YPL047W FAA2P39518 744 aa1.6□□□□□ -2.15
SGF11YPL047W FUN12P39730 1002 aaKnown RBP1.6□□□□□ -2.15
SGF11YPL047W GPP2P40106 250 aaKnown RBP1.6□□□□□ -2.15
SGF11YPL047W AZF1P41696 914 aa1.6□□□□□ -2.15
SGF11YPL047W DUG1P43616 481 aaKnown RBP1.6□□□□□ -2.15
SGF11YPL047W IML2P47031 731 aa1.6□□□□□ -2.15
SGF11YPL047W UBX6P47049 396 aa1.6□□□□□ -2.15
SGF11YPL047W YRB30P53107 440 aaPredicted RBP1.6□□□□□ -2.15
SGF11YPL047W SLD3P53135 668 aa1.6□□□□□ -2.15
SGF11YPL047W YNL181WP53878 407 aa1.6□□□□□ -2.15
SGF11YPL047W FRE3Q08905 711 aa1.6□□□□□ -2.15
SGF11YPL047W COX1P00401 534 aa1.59□□□□□ -2.15
SGF11YPL047W PDA1P16387 420 aaKnown RBP1.59□□□□□ -2.15
SGF11YPL047W COX11P19516 300 aaKnown RBP1.59□□□□□ -2.15
SGF11YPL047W RPS7AP26786 190 aaKnown RBP1.59□□□□□ -2.15
SGF11YPL047W KRE9P39005 276 aa1.59□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 15 ms