RNA–Protein interactions for RNA: YOR156C

NFI1, Transcript of SUMO E3 ligase, yeast

Gene NFI1, Length 2,181 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NFI1	YOR156C	GCD7	P32502	381 aa	Predicted RBP	5.5	□□□□□ -1.53
NFI1	YOR156C	CBK1	P53894	756 aa		5.5	□□□□□ -1.53
NFI1	YOR156C	SNO4	Q04902	237 aa		5.5	□□□□□ -1.53
NFI1	YOR156C	HSP33	Q08914	237 aa	Known RBP	5.5	□□□□□ -1.53
NFI1	YOR156C	HSP32	Q08992	237 aa		5.5	□□□□□ -1.53
NFI1	YOR156C	RPL7A	P05737	244 aa	Known RBP	5.49	□□□□□ -1.53
NFI1	YOR156C	MRPL9	P31334	269 aa		5.49	□□□□□ -1.53
NFI1	YOR156C	YEL020C	P39994	560 aa		5.49	□□□□□ -1.53
NFI1	YOR156C	IST3	P40565	148 aa	Predicted RBP	5.49	□□□□□ -1.53
NFI1	YOR156C	QRI1	P43123	477 aa	Known RBP	5.49	□□□□□ -1.53
NFI1	YOR156C	RPL7B	Q12213	244 aa	Known RBP	5.49	□□□□□ -1.53
NFI1	YOR156C	RPN13	O13563	156 aa		5.49	□□□□□ -1.53
NFI1	YOR156C	YML003W	P0CF16	290 aa		5.49	□□□□□ -1.53
NFI1	YOR156C	LRE1	P25579	583 aa	Known RBP	5.49	□□□□□ -1.53
NFI1	YOR156C	YMC1	P32331	307 aa		5.49	□□□□□ -1.53
NFI1	YOR156C	CNS1	P33313	385 aa		5.49	□□□□□ -1.53
NFI1	YOR156C	NUP120	P35729	1037 aa		5.49	□□□□□ -1.53
NFI1	YOR156C	MTG2	P38860	518 aa		5.49	□□□□□ -1.53
NFI1	YOR156C	TDA10	P42938	290 aa		5.49	□□□□□ -1.53
NFI1	YOR156C	NPA3	P47122	385 aa		5.49	□□□□□ -1.53
NFI1	YOR156C	RRI2	Q12348	645 aa		5.49	□□□□□ -1.53
NFI1	YOR156C	UGP1	P32861	499 aa	Known RBP	5.48	□□□□□ -1.53
NFI1	YOR156C	PSD1	P39006	500 aa		5.48	□□□□□ -1.53
NFI1	YOR156C	LAS21	P40367	830 aa		5.48	□□□□□ -1.53
NFI1	YOR156C	RIC1	P40395	1056 aa		5.48	□□□□□ -1.53
NFI1	YOR156C	MRK1	P50873	501 aa		5.48	□□□□□ -1.53
NFI1	YOR156C	YGR079W	P53249	370 aa		5.48	□□□□□ -1.53
NFI1	YOR156C	ATG23	Q06671	453 aa		5.48	□□□□□ -1.53
NFI1	YOR156C	TMA16	Q08687	178 aa		5.48	□□□□□ -1.53
NFI1	YOR156C	SAT4	P25333	603 aa	Known RBP	5.48	□□□□□ -1.53
NFI1	YOR156C	GFD2	P25370	566 aa	Known RBP	5.48	□□□□□ -1.53
NFI1	YOR156C	YJU2	P28320	278 aa	Predicted RBP	5.48	□□□□□ -1.53
NFI1	YOR156C	MUD2	P36084	527 aa	Known RBP	5.48	□□□□□ -1.53
NFI1	YOR156C	ERC1	P38767	581 aa		5.48	□□□□□ -1.53
NFI1	YOR156C	EXO1	P39875	702 aa		5.48	□□□□□ -1.53
NFI1	YOR156C	FUM1	P08417	488 aa	Known RBP	5.47	□□□□□ -1.53
NFI1	YOR156C	RPB2	P08518	1224 aa	Known RBP	5.47	□□□□□ -1.53
NFI1	YOR156C	AAD3	P25612	363 aa		5.47	□□□□□ -1.53
NFI1	YOR156C	PAC2	P39937	518 aa		5.47	□□□□□ -1.53
NFI1	YOR156C	YIL166C	P40445	542 aa		5.47	□□□□□ -1.53
NFI1	YOR156C	SIP4	P46954	829 aa		5.47	□□□□□ -1.53
NFI1	YOR156C	YML053C	Q04978	212 aa		5.47	□□□□□ -1.53
NFI1	YOR156C	HRD3	Q05787	833 aa		5.47	□□□□□ -1.53
NFI1	YOR156C	SWT1	Q12104	458 aa		5.47	□□□□□ -1.53
NFI1	YOR156C	SPO16	P17122	198 aa		5.46	□□□□□ -1.53
NFI1	YOR156C	FMP10	P40098	244 aa		5.46	□□□□□ -1.53
NFI1	YOR156C	ASE1	P50275	885 aa		5.46	□□□□□ -1.53
NFI1	YOR156C	COG2	P53271	262 aa		5.46	□□□□□ -1.53
NFI1	YOR156C	COG4	Q06096	861 aa		5.46	□□□□□ -1.53
NFI1	YOR156C	ULA1	Q12059	462 aa		5.46	□□□□□ -1.53
NFI1	YOR156C	VCX1	Q99385	411 aa		5.46	□□□□□ -1.53
NFI1	YOR156C	SEC3	P33332	1336 aa	Known RBP	5.46	□□□□□ -1.54
NFI1	YOR156C	RRP43	P25359	394 aa	Predicted RBP	5.46	□□□□□ -1.54
NFI1	YOR156C	HES1	P35843	434 aa		5.46	□□□□□ -1.54
NFI1	YOR156C	RPF2	P36160	344 aa	Known RBP	5.46	□□□□□ -1.54
NFI1	YOR156C	PLM2	Q04383	521 aa		5.46	□□□□□ -1.54
NFI1	YOR156C	YPL191C	Q08930	360 aa		5.46	□□□□□ -1.54
NFI1	YOR156C	AHA1	Q12449	350 aa	Known RBP	5.46	□□□□□ -1.54
NFI1	YOR156C	COX1	P00401	534 aa		5.45	□□□□□ -1.54
NFI1	YOR156C	RFA2	P26754	273 aa	Known RBP	5.45	□□□□□ -1.54
NFI1	YOR156C	MRP20	P32387	263 aa		5.45	□□□□□ -1.54
NFI1	YOR156C	YIL161W	P40449	235 aa	Known RBP	5.45	□□□□□ -1.54
NFI1	YOR156C	TMA108	P40462	946 aa		5.45	□□□□□ -1.54
NFI1	YOR156C	UPF3	P48412	387 aa	Known RBP	5.45	□□□□□ -1.54
NFI1	YOR156C	YNR061C	P53747	219 aa		5.45	□□□□□ -1.54
NFI1	YOR156C	REG1	Q00816	1014 aa		5.45	□□□□□ -1.54
NFI1	YOR156C	AI5_ALPHA	Q9ZZX1	630 aa		5.45	□□□□□ -1.54
NFI1	YOR156C	YLR302C	O13544	120 aa		5.45	□□□□□ -1.54
NFI1	YOR156C	SES1	P07284	462 aa	Known RBP	5.45	□□□□□ -1.54
NFI1	YOR156C	RPA135	P22138	1203 aa	Known RBP	5.45	□□□□□ -1.54
NFI1	YOR156C	ERG8	P24521	451 aa		5.45	□□□□□ -1.54
NFI1	YOR156C	YSP3	P25036	478 aa		5.45	□□□□□ -1.54
NFI1	YOR156C	IMP2'	P32351	346 aa		5.45	□□□□□ -1.54
NFI1	YOR156C	SIP1	P32578	815 aa		5.45	□□□□□ -1.54
NFI1	YOR156C	SAP1	P39955	897 aa	Known RBP	5.45	□□□□□ -1.54
NFI1	YOR156C	YKU80	Q04437	629 aa		5.45	□□□□□ -1.54
NFI1	YOR156C	YMR084W	A2P2R3	262 aa		5.44	□□□□□ -1.54
NFI1	YOR156C	OPT1	P40897	799 aa		5.44	□□□□□ -1.54
NFI1	YOR156C	MSY1	P48527	492 aa		5.44	□□□□□ -1.54
NFI1	YOR156C	VPS4	P52917	437 aa		5.44	□□□□□ -1.54
NFI1	YOR156C	RCO1	Q04779	684 aa		5.44	□□□□□ -1.54
NFI1	YOR156C	PAH1	P32567	862 aa		5.43	□□□□□ -1.54
NFI1	YOR156C	VBA2	P38358	474 aa	Known RBP	5.43	□□□□□ -1.54
NFI1	YOR156C	ERP2	P39704	215 aa		5.43	□□□□□ -1.54
NFI1	YOR156C	DJP1	P40564	432 aa		5.43	□□□□□ -1.54
NFI1	YOR156C	ADE5,7	P07244	802 aa	Known RBP	5.43	□□□□□ -1.54
NFI1	YOR156C	SAN1	P22470	610 aa		5.43	□□□□□ -1.54
NFI1	YOR156C	ADY2	P25613	283 aa		5.43	□□□□□ -1.54
NFI1	YOR156C	KES1	P35844	434 aa	Known RBP	5.43	□□□□□ -1.54
NFI1	YOR156C	FUN12	P39730	1002 aa	Known RBP	5.43	□□□□□ -1.54
NFI1	YOR156C	YEL068C	P39977	110 aa		5.43	□□□□□ -1.54
NFI1	YOR156C	NOP16	P40007	231 aa	Known RBP	5.43	□□□□□ -1.54
NFI1	YOR156C	STU2	P46675	888 aa		5.43	□□□□□ -1.54
NFI1	YOR156C	APM1	Q00776	475 aa	Predicted RBP	5.43	□□□□□ -1.54
NFI1	YOR156C	PSK2	Q08217	1101 aa		5.43	□□□□□ -1.54
NFI1	YOR156C	BAG7	Q12128	409 aa		5.43	□□□□□ -1.54
NFI1	YOR156C	CDC16	P09798	840 aa		5.42	□□□□□ -1.54
NFI1	YOR156C	HSC82	P15108	705 aa	Known RBP	5.42	□□□□□ -1.54
NFI1	YOR156C	YJR061W	P40355	935 aa		5.42	□□□□□ -1.54
NFI1	YOR156C	PFK26	P40433	827 aa	Known RBP	5.42	□□□□□ -1.54

Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms