RNA–Protein interactions for RNA: YMR048W

CSM3, Transcript of Replication fork associated factor, yeastyeast

Gene CSM3, Length 954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSM3YMR048W LYS21Q12122 440 aaKnown RBP4.5□□□□□ -1.69
CSM3YMR048W Q0010Q9ZZX9 128 aa4.5□□□□□ -1.69
CSM3YMR048W ESC1Q03661 1658 aaKnown RBP4.49□□□□□ -1.69
CSM3YMR048W YPT1P01123 206 aaKnown RBP4.49□□□□□ -1.69
CSM3YMR048W STB5P38699 743 aa4.49□□□□□ -1.69
CSM3YMR048W SAP1P39955 897 aaKnown RBP4.49□□□□□ -1.69
CSM3YMR048W YJR008WP47085 338 aa4.49□□□□□ -1.69
CSM3YMR048W AAT1Q01802 451 aa4.49□□□□□ -1.69
CSM3YMR048W TRI1Q05024 226 aa4.49□□□□□ -1.69
CSM3YMR048W RAD34Q06665 692 aa4.49□□□□□ -1.69
CSM3YMR048W YDL242WQ07746 117 aa4.49□□□□□ -1.69
CSM3YMR048W SRL1Q08673 210 aa4.49□□□□□ -1.69
CSM3YMR048W YOR389WQ08912 624 aa4.49□□□□□ -1.69
CSM3YMR048W GET3Q12154 354 aaKnown RBP4.49□□□□□ -1.69
CSM3YMR048W SNQ2P32568 1501 aaKnown RBP4.49□□□□□ -1.69
CSM3YMR048W TY2B-BQ12491 1770 aa4.49□□□□□ -1.69
CSM3YMR048W TY1B-DR3Q99231 1755 aa4.49□□□□□ -1.69
CSM3YMR048W GEA2P39993 1459 aaKnown RBP4.49□□□□□ -1.69
CSM3YMR048W RTC1Q08281 1341 aa4.48□□□□□ -1.69
CSM3YMR048W TY1B-BRQ12193 1756 aa4.48□□□□□ -1.69
CSM3YMR048W TY1B-GR3Q12316 1755 aa4.48□□□□□ -1.69
CSM3YMR048W TY1B-ORQ92393 1755 aa4.48□□□□□ -1.69
CSM3YMR048W YCR061WP25639 631 aa4.48□□□□□ -1.69
CSM3YMR048W ATO2P32907 282 aa4.48□□□□□ -1.69
CSM3YMR048W ENP1P38333 483 aaKnown RBP4.48□□□□□ -1.69
CSM3YMR048W FLO5P38894 1075 aa4.48□□□□□ -1.69
CSM3YMR048W VPS8P39702 1274 aa4.48□□□□□ -1.69
CSM3YMR048W MDV1P47025 714 aa4.48□□□□□ -1.69
CSM3YMR048W ECM38Q05902 660 aaPredicted RBP4.48□□□□□ -1.69
CSM3YMR048W BUD7Q08754 746 aa4.48□□□□□ -1.69
CSM3YMR048W PSF3Q12146 194 aa4.48□□□□□ -1.69
CSM3YMR048W NUP159P40477 1460 aa4.48□□□□□ -1.69
CSM3YMR048W TY1B-HO13535 1793 aa4.48□□□□□ -1.69
CSM3YMR048W TY1B-DR5P0C2I2 1755 aa4.48□□□□□ -1.69
CSM3YMR048W TY1B-DR6P0C2I3 1755 aa4.48□□□□□ -1.69
CSM3YMR048W TY1B-LR2P0C2I5 1755 aa4.48□□□□□ -1.69
CSM3YMR048W TY1B-LR3P0C2I6 1755 aaKnown RBP4.48□□□□□ -1.69
CSM3YMR048W TY1B-PR1P0C2I9 1755 aaKnown RBP4.48□□□□□ -1.69
CSM3YMR048W TY1B-PR2P0C2J0 1756 aa4.48□□□□□ -1.69
CSM3YMR048W TY1B-PR3P0C2J1 1755 aaKnown RBP4.48□□□□□ -1.69
CSM3YMR048W TY1B-JR1P47098 1755 aa4.48□□□□□ -1.69
CSM3YMR048W TY1B-ML2Q03434 1755 aaKnown RBP4.48□□□□□ -1.69
CSM3YMR048W TY1B-ER1Q03612 1755 aa4.48□□□□□ -1.69
CSM3YMR048W TY1B-ML1Q04711 1755 aaKnown RBP4.48□□□□□ -1.69
CSM3YMR048W TY1B-GR2Q12269 1755 aa4.48□□□□□ -1.69
CSM3YMR048W TY1B-OLQ12273 1755 aa4.48□□□□□ -1.69
CSM3YMR048W TY1B-PLQ12414 1755 aaKnown RBP4.48□□□□□ -1.69
CSM3YMR048W SNT2P53127 1403 aa4.47□□□□□ -1.69
CSM3YMR048W RPT3P33298 428 aaKnown RBP4.47□□□□□ -1.69
CSM3YMR048W PEX8P53248 589 aa4.47□□□□□ -1.69
CSM3YMR048W ATX2Q12067 313 aa4.47□□□□□ -1.69
CSM3YMR048W YER175W-AQ8TGU4 54 aa4.47□□□□□ -1.69
CSM3YMR048W DNF1P32660 1571 aa4.47□□□□□ -1.69
CSM3YMR048W RPA190P10964 1664 aaKnown RBP4.46□□□□□ -1.7
CSM3YMR048W VFA1P40080 203 aa4.46□□□□□ -1.7
CSM3YMR048W YIR016WP40572 265 aa4.46□□□□□ -1.7
CSM3YMR048W LYS20P48570 428 aaKnown RBP4.46□□□□□ -1.7
CSM3YMR048W BOP3P53958 396 aa4.46□□□□□ -1.7
CSM3YMR048W YAT1P80235 687 aa4.46□□□□□ -1.7
CSM3YMR048W YPL191CQ08930 360 aa4.46□□□□□ -1.7
CSM3YMR048W UBX3Q12229 455 aa4.46□□□□□ -1.7
CSM3YMR048W NYV1Q12255 253 aa4.46□□□□□ -1.7
CSM3YMR048W DBP10Q12389 995 aaKnown RBP4.46□□□□□ -1.7
CSM3YMR048W MPD2Q99316 277 aa4.46□□□□□ -1.7
CSM3YMR048W CAT8P39113 1433 aa4.46□□□□□ -1.7
CSM3YMR048W MLP2P40457 1679 aa4.45□□□□□ -1.7
CSM3YMR048W SES1P07284 462 aaKnown RBP4.45□□□□□ -1.7
CSM3YMR048W GCS1P35197 352 aa4.45□□□□□ -1.7
CSM3YMR048W TAF5P38129 798 aa4.45□□□□□ -1.7
CSM3YMR048W ARO9P38840 513 aaPredicted RBP4.45□□□□□ -1.7
CSM3YMR048W YML053CQ04978 212 aa4.45□□□□□ -1.7
CSM3YMR048W SNA4Q07549 140 aa4.45□□□□□ -1.7
CSM3YMR048W YOL057WQ08225 711 aa4.45□□□□□ -1.7
CSM3YMR048W SLX4Q12098 748 aa4.45□□□□□ -1.7
CSM3YMR048W NTE1Q04958 1679 aa4.45□□□□□ -1.7
CSM3YMR048W NIC96P34077 839 aa4.44□□□□□ -1.7
CSM3YMR048W TAN1P53072 289 aaPredicted RBP4.44□□□□□ -1.7
CSM3YMR048W YNL034WP53963 612 aa4.44□□□□□ -1.7
CSM3YMR048W TRS31Q03337 283 aa4.44□□□□□ -1.7
CSM3YMR048W ARA2Q04212 335 aa4.44□□□□□ -1.7
CSM3YMR048W VPS15P22219 1454 aa4.43□□□□□ -1.7
CSM3YMR048W BUD3P25558 1636 aa4.43□□□□□ -1.7
CSM3YMR048W PDR12Q02785 1511 aa4.43□□□□□ -1.7
CSM3YMR048W GAL4P04386 881 aa4.43□□□□□ -1.7
CSM3YMR048W CTT1P06115 562 aa4.43□□□□□ -1.7
CSM3YMR048W YEF3P16521 1044 aaKnown RBP4.43□□□□□ -1.7
CSM3YMR048W PRE2P30656 287 aaKnown RBP4.43□□□□□ -1.7
CSM3YMR048W VBA2P38358 474 aaKnown RBP4.43□□□□□ -1.7
CSM3YMR048W PUF2Q12221 1075 aaKnown RBP RIP-Chip data4.43□□□□□ -1.7not detected
CSM3YMR048W YOR111WQ99210 232 aa4.43□□□□□ -1.7
CSM3YMR048W PDR15Q04182 1529 aaKnown RBP4.42□□□□□ -1.7
CSM3YMR048W RPO21P04050 1733 aaKnown RBP4.42□□□□□ -1.7
CSM3YMR048W SCO2P38072 301 aa4.42□□□□□ -1.7
CSM3YMR048W ERV46P39727 415 aa4.42□□□□□ -1.7
CSM3YMR048W YAT2P40017 923 aa4.42□□□□□ -1.7
CSM3YMR048W YIL152WP40455 235 aa4.42□□□□□ -1.7
CSM3YMR048W YJL107CP42947 387 aa4.42□□□□□ -1.7
CSM3YMR048W PUS4P48567 403 aaKnown RBP4.42□□□□□ -1.7
CSM3YMR048W ORC5P50874 479 aa4.42□□□□□ -1.7
CSM3YMR048W DRS2P39524 1355 aa4.41□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 10.9 ms