RNA–Protein interactions for RNA: YLR093C

NYV1, Transcript of v-SNARE component of the vacuolar SNARE complex, yeastyeast

Gene NYV1, Length 762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NYV1YLR093C PTC6P25646 442 aa3.66□□□□□ -1.82
NYV1YLR093C PRE2P30656 287 aaKnown RBP3.66□□□□□ -1.82
NYV1YLR093C NIC96P34077 839 aa3.66□□□□□ -1.82
NYV1YLR093C RPF2P36160 344 aaKnown RBP3.66□□□□□ -1.82
NYV1YLR093C ERC1P38767 581 aa3.66□□□□□ -1.82
NYV1YLR093C EAF7P53911 425 aaKnown RBP3.66□□□□□ -1.82
NYV1YLR093C TRS31Q03337 283 aa3.66□□□□□ -1.82
NYV1YLR093C PSF3Q12146 194 aa3.66□□□□□ -1.82
NYV1YLR093C ILV2P07342 687 aaKnown RBP3.65□□□□□ -1.83
NYV1YLR093C PPZ1P26570 692 aa3.65□□□□□ -1.83
NYV1YLR093C VFA1P40080 203 aa3.65□□□□□ -1.83
NYV1YLR093C VRG4P40107 337 aa3.65□□□□□ -1.83
NYV1YLR093C THI3Q07471 609 aa3.65□□□□□ -1.83
NYV1YLR093C LEA1Q08963 238 aaPredicted RBP3.65□□□□□ -1.83
NYV1YLR093C NOP1P15646 327 aaKnown RBP3.64□□□□□ -1.83
NYV1YLR093C MSS51P32335 436 aa3.64□□□□□ -1.83
NYV1YLR093C FMP46P36141 133 aaKnown RBP3.64□□□□□ -1.83
NYV1YLR093C YND1P40009 630 aa3.64□□□□□ -1.83
NYV1YLR093C CDC1P40986 491 aa3.64□□□□□ -1.83
NYV1YLR093C SKP2P42843 763 aa3.64□□□□□ -1.83
NYV1YLR093C HOS2P53096 452 aaPredicted RBP3.64□□□□□ -1.83
NYV1YLR093C YRB30P53107 440 aaPredicted RBP3.64□□□□□ -1.83
NYV1YLR093C ECM16Q04217 1267 aaKnown RBP3.64□□□□□ -1.83
NYV1YLR093C CRF1Q04930 467 aa3.64□□□□□ -1.83
NYV1YLR093C PEX15Q08215 383 aa3.64□□□□□ -1.83
NYV1YLR093C DBP10Q12389 995 aaKnown RBP3.64□□□□□ -1.83
NYV1YLR093C YBR255C-AQ3E776 120 aa3.64□□□□□ -1.83
NYV1YLR093C SWC3P31376 625 aa3.63□□□□□ -1.83
NYV1YLR093C HEM12P32347 362 aaPredicted RBP3.63□□□□□ -1.83
NYV1YLR093C OCT1P35999 772 aa3.63□□□□□ -1.83
NYV1YLR093C VPS41P38959 992 aa3.63□□□□□ -1.83
NYV1YLR093C SAD1P43589 448 aa3.63□□□□□ -1.83
NYV1YLR093C POL31P46957 487 aa3.63□□□□□ -1.83
NYV1YLR093C CAC2Q04199 468 aa3.63□□□□□ -1.83
NYV1YLR093C GPN2Q08726 347 aaPredicted RBP3.63□□□□□ -1.83
NYV1YLR093C YMR230W-AQ3E7B5 62 aa3.63□□□□□ -1.83
NYV1YLR093C RPL42AP0CX27 106 aaKnown RBP3.62□□□□□ -1.83
NYV1YLR093C RPL42BP0CX28 106 aaKnown RBP3.62□□□□□ -1.83
NYV1YLR093C YLF2P38746 405 aa3.62□□□□□ -1.83
NYV1YLR093C ARB1P40024 610 aaKnown RBP3.62□□□□□ -1.83
NYV1YLR093C QRI7P43122 407 aa3.62□□□□□ -1.83
NYV1YLR093C PUS4P48567 403 aaKnown RBP3.62□□□□□ -1.83
NYV1YLR093C PDR8Q06149 701 aa3.62□□□□□ -1.83
NYV1YLR093C PIG1Q06216 648 aa3.62□□□□□ -1.83
NYV1YLR093C TRE2Q08693 809 aa3.62□□□□□ -1.83
NYV1YLR093C CTT1P06115 562 aa3.61□□□□□ -1.83
NYV1YLR093C PDE1P22434 369 aa3.61□□□□□ -1.83
NYV1YLR093C SIP1P32578 815 aa3.61□□□□□ -1.83
NYV1YLR093C MNN2P38069 597 aa3.61□□□□□ -1.83
NYV1YLR093C VPS25P47142 202 aa3.61□□□□□ -1.83
NYV1YLR093C DIG1Q03063 452 aaKnown RBP3.61□□□□□ -1.83
NYV1YLR093C ECM38Q05902 660 aaPredicted RBP3.61□□□□□ -1.83
NYV1YLR093C TAF5P38129 798 aa3.6□□□□□ -1.83
NYV1YLR093C FMP42Q04991 504 aa3.6□□□□□ -1.83
NYV1YLR093C ECI1Q05871 280 aa3.6□□□□□ -1.83
NYV1YLR093C SLX4Q12098 748 aa3.6□□□□□ -1.83
NYV1YLR093C CDC23P16522 626 aa3.59□□□□□ -1.83
NYV1YLR093C LAC1P28496 418 aa3.59□□□□□ -1.83
NYV1YLR093C SDS24P38314 527 aa3.59□□□□□ -1.83
NYV1YLR093C BZZ1P38822 633 aa3.59□□□□□ -1.83
NYV1YLR093C NPA3P47122 385 aa3.59□□□□□ -1.83
NYV1YLR093C YGL081WP53156 320 aa3.59□□□□□ -1.83
NYV1YLR093C YPR003CP53394 754 aa3.59□□□□□ -1.83
NYV1YLR093C SWF1Q04629 336 aa3.59□□□□□ -1.83
NYV1YLR093C ARP9Q05123 467 aa3.59□□□□□ -1.83
NYV1YLR093C CRD1Q07560 283 aa3.59□□□□□ -1.83
NYV1YLR093C MCH4Q08268 501 aa3.59□□□□□ -1.83
NYV1YLR093C RPS7AP26786 190 aaKnown RBP3.58□□□□□ -1.84
NYV1YLR093C YOX1P34161 385 aa3.58□□□□□ -1.84
NYV1YLR093C TGL1P34163 548 aa3.58□□□□□ -1.84
NYV1YLR093C UBP8P50102 471 aa3.58□□□□□ -1.84
NYV1YLR093C VPS64Q03944 604 aa3.58□□□□□ -1.84
NYV1YLR093C AIM6Q07716 390 aa3.58□□□□□ -1.84
NYV1YLR093C HES1P35843 434 aa3.57□□□□□ -1.84
NYV1YLR093C YBR071WP38243 211 aa3.57□□□□□ -1.84
NYV1YLR093C EFM2P38347 419 aa3.57□□□□□ -1.84
NYV1YLR093C PHM8P40025 321 aa3.57□□□□□ -1.84
NYV1YLR093C ESF2P53743 316 aaKnown RBP3.57□□□□□ -1.84
NYV1YLR093C POS5Q06892 414 aa3.57□□□□□ -1.84
NYV1YLR093C APL5Q08951 932 aaKnown RBP3.57□□□□□ -1.84
NYV1YLR093C VAS1P07806 1104 aaKnown RBP3.56□□□□□ -1.84
NYV1YLR093C PHO3P24031 467 aa3.56□□□□□ -1.84
NYV1YLR093C UBP12P39538 1254 aa3.56□□□□□ -1.84
NYV1YLR093C ASG1P40467 964 aa3.56□□□□□ -1.84
NYV1YLR093C IZH1Q03419 316 aa3.56□□□□□ -1.84
NYV1YLR093C SND1Q04007 877 aa3.56□□□□□ -1.84
NYV1YLR093C AAD4Q07747 329 aa3.56□□□□□ -1.84
NYV1YLR093C YLR112WQ12130 139 aa3.56□□□□□ -1.84
NYV1YLR093C TAH18Q12181 623 aa3.56□□□□□ -1.84
NYV1YLR093C KAR1P11927 433 aa3.55□□□□□ -1.84
NYV1YLR093C SCS2P40075 244 aaKnown RBP3.55□□□□□ -1.84
NYV1YLR093C YGL036WP53185 909 aaPredicted RBP3.55□□□□□ -1.84
NYV1YLR093C YNL034WP53963 612 aa3.55□□□□□ -1.84
NYV1YLR093C YMR254CQ04838 102 aa3.55□□□□□ -1.84
NYV1YLR093C SDS22P36047 338 aa3.54□□□□□ -1.84
NYV1YLR093C PSP1P50896 841 aaKnown RBP3.54□□□□□ -1.84
NYV1YLR093C CUL3P53202 744 aa3.54□□□□□ -1.84
NYV1YLR093C ESBP6P53918 673 aa3.54□□□□□ -1.84
NYV1YLR093C COX1P00401 534 aa3.53□□□□□ -1.84
NYV1YLR093C SEC1P30619 724 aaKnown RBP3.53□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 46.9 ms