RNA–Protein interactions for RNA: YLL050C

COF1, Transcript of Cofilin, involved in pH-dependent actin filament depolarization, yeastyeast

Gene COF1, Length 432 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
COF1YLL050C CWC2Q12046 339 aaPredicted RBP1.72□□□□□ -2.13
COF1YLL050C PSF3Q12146 194 aa1.72□□□□□ -2.13
COF1YLL050C UBX3Q12229 455 aa1.72□□□□□ -2.13
COF1YLL050C ARP7Q12406 477 aa1.72□□□□□ -2.13
COF1YLL050C AHA1Q12449 350 aaKnown RBP1.72□□□□□ -2.13
COF1YLL050C RTP1Q12751 981 aa1.72□□□□□ -2.13
COF1YLL050C APA1P16550 321 aaKnown RBP1.71□□□□□ -2.14
COF1YLL050C VPS33P20795 691 aa1.71□□□□□ -2.14
COF1YLL050C ATP12P22135 325 aa1.71□□□□□ -2.14
COF1YLL050C MAK32P23060 363 aa1.71□□□□□ -2.14
COF1YLL050C CHS3P29465 1165 aa1.71□□□□□ -2.14
COF1YLL050C HXT4P32467 576 aa1.71□□□□□ -2.14
COF1YLL050C XRS2P33301 854 aa1.71□□□□□ -2.14
COF1YLL050C TGL1P34163 548 aa1.71□□□□□ -2.14
COF1YLL050C MPE1P35728 441 aaKnown RBP1.71□□□□□ -2.14
COF1YLL050C APM3P38153 483 aa1.71□□□□□ -2.14
COF1YLL050C PSY4P38193 441 aa1.71□□□□□ -2.14
COF1YLL050C GND1P38720 489 aaKnown RBP1.71□□□□□ -2.14
COF1YLL050C RTT107P38850 1070 aa1.71□□□□□ -2.14
COF1YLL050C YJL193WP39542 402 aa1.71□□□□□ -2.14
COF1YLL050C STL1P39932 569 aa1.71□□□□□ -2.14
COF1YLL050C TMA108P40462 946 aa1.71□□□□□ -2.14
COF1YLL050C IRC5P43610 853 aa1.71□□□□□ -2.14
COF1YLL050C SRB7P47822 140 aa1.71□□□□□ -2.14
COF1YLL050C CEG1Q01159 459 aaPredicted RBP1.71□□□□□ -2.14
COF1YLL050C MDM1Q01846 1127 aa1.71□□□□□ -2.14
COF1YLL050C MTD1Q02046 320 aaKnown RBP1.71□□□□□ -2.14
COF1YLL050C TRS130Q03660 1102 aa1.71□□□□□ -2.14
COF1YLL050C GIR2Q03768 265 aaPredicted RBP1.71□□□□□ -2.14
COF1YLL050C TRI1Q05024 226 aa1.71□□□□□ -2.14
COF1YLL050C TSR2Q06672 205 aaKnown RBP1.71□□□□□ -2.14
COF1YLL050C HIM1Q06674 414 aa1.71□□□□□ -2.14
COF1YLL050C NGL1Q08213 363 aaKnown RBP1.71□□□□□ -2.14
COF1YLL050C DSE3Q08729 430 aa1.71□□□□□ -2.14
COF1YLL050C NUR1Q12066 484 aa1.71□□□□□ -2.14
COF1YLL050C ATX2Q12067 313 aa1.71□□□□□ -2.14
COF1YLL050C PUF2Q12221 1075 aaKnown RBP RIP-Chip data1.71□□□□□ -2.14not detected
COF1YLL050C PNO1Q99216 274 aaKnown RBP1.71□□□□□ -2.14
COF1YLL050C INH1P01097 85 aa1.7□□□□□ -2.14
COF1YLL050C VAS1P07806 1104 aaKnown RBP1.7□□□□□ -2.14
COF1YLL050C HMG2P12684 1045 aa1.7□□□□□ -2.14
COF1YLL050C GLN4P13188 809 aaKnown RBP1.7□□□□□ -2.14
COF1YLL050C CDC26P14724 124 aa1.7□□□□□ -2.14
COF1YLL050C SEC18P18759 758 aaKnown RBP1.7□□□□□ -2.14
COF1YLL050C YCR043CP25361 127 aa1.7□□□□□ -2.14
COF1YLL050C IMP2'P32351 346 aa1.7□□□□□ -2.14
COF1YLL050C MCM10P32354 571 aa1.7□□□□□ -2.14
COF1YLL050C MF(ALPHA)2P32435 120 aa1.7□□□□□ -2.14
COF1YLL050C RPT3P33298 428 aaKnown RBP1.7□□□□□ -2.14
COF1YLL050C RRN3P36070 627 aa1.7□□□□□ -2.14
COF1YLL050C MRPL36P36531 177 aa1.7□□□□□ -2.14
COF1YLL050C FTH1P38310 465 aa1.7□□□□□ -2.14
COF1YLL050C YLF2P38746 405 aa1.7□□□□□ -2.14
COF1YLL050C FAA2P39518 744 aa1.7□□□□□ -2.14
COF1YLL050C KAP123P40069 1113 aaKnown RBP1.7□□□□□ -2.14
COF1YLL050C SCS2P40075 244 aaKnown RBP1.7□□□□□ -2.14
COF1YLL050C RPT2P40327 437 aaKnown RBP1.7□□□□□ -2.14
COF1YLL050C TES1P41903 349 aaKnown RBP1.7□□□□□ -2.14
COF1YLL050C GTR1Q00582 310 aa1.7□□□□□ -2.14
COF1YLL050C SPC19Q03954 165 aa1.7□□□□□ -2.14
COF1YLL050C MLH2Q07980 695 aa1.7□□□□□ -2.14
COF1YLL050C NRT1Q08485 598 aa1.7□□□□□ -2.14
COF1YLL050C GET3Q12154 354 aaKnown RBP1.7□□□□□ -2.14
COF1YLL050C VPS5Q92331 675 aa1.7□□□□□ -2.14
COF1YLL050C NUC1P08466 329 aa1.69□□□□□ -2.14
COF1YLL050C MIS1P09440 975 aaKnown RBP1.69□□□□□ -2.14
COF1YLL050C ADH4P10127 382 aa1.69□□□□□ -2.14
COF1YLL050C MTF2P10849 440 aa1.69□□□□□ -2.14
COF1YLL050C CBP3P21560 335 aa1.69□□□□□ -2.14
COF1YLL050C YCL049CP25577 312 aa1.69□□□□□ -2.14
COF1YLL050C CWH43P25618 953 aa1.69□□□□□ -2.14
COF1YLL050C CDC5P32562 705 aa1.69□□□□□ -2.14
COF1YLL050C SLC1P33333 303 aa1.69□□□□□ -2.14
COF1YLL050C YHR033WP38690 423 aa1.69□□□□□ -2.14
COF1YLL050C IMD2P38697 523 aaKnown RBP1.69□□□□□ -2.14
COF1YLL050C SWD1P39706 426 aa1.69□□□□□ -2.14
COF1YLL050C EAF5P39995 279 aa1.69□□□□□ -2.14
COF1YLL050C CIN1P40987 1014 aa1.69□□□□□ -2.14
COF1YLL050C SMK1P41808 388 aa1.69□□□□□ -2.14
COF1YLL050C ERR3P42222 437 aa1.69□□□□□ -2.14
COF1YLL050C CIR1P42940 261 aa1.69□□□□□ -2.14
COF1YLL050C MAD3P47074 515 aa1.69□□□□□ -2.14
COF1YLL050C IMD3P50095 523 aaKnown RBP1.69□□□□□ -2.14
COF1YLL050C CPR6P53691 371 aaKnown RBP1.69□□□□□ -2.14
COF1YLL050C YNL092WP53934 400 aa1.69□□□□□ -2.14
COF1YLL050C MRPL13Q02204 264 aa1.69□□□□□ -2.14
COF1YLL050C SNU56Q03782 492 aaKnown RBP1.69□□□□□ -2.14
COF1YLL050C RAD33Q04231 177 aa1.69□□□□□ -2.14
COF1YLL050C EIS1Q05050 843 aaKnown RBP1.69□□□□□ -2.14
COF1YLL050C CIA1Q05583 330 aa1.69□□□□□ -2.14
COF1YLL050C MED1Q12321 566 aa1.69□□□□□ -2.14
COF1YLL050C YOL087CQ99247 1116 aa1.69□□□□□ -2.14
COF1YLL050C GAL4P04386 881 aa1.68□□□□□ -2.14
COF1YLL050C CDC31P06704 161 aaKnown RBP1.68□□□□□ -2.14
COF1YLL050C ILS1P09436 1072 aaKnown RBP1.68□□□□□ -2.14
COF1YLL050C PCK1P10963 549 aa1.68□□□□□ -2.14
COF1YLL050C YPK1P12688 680 aaKnown RBP1.68□□□□□ -2.14
COF1YLL050C PFK2P16862 959 aaKnown RBP RIP-Chip data1.68□□□□□ -2.14not detected
COF1YLL050C SIR1P21691 654 aa1.68□□□□□ -2.14
COF1YLL050C UBC1P21734 215 aaKnown RBP1.68□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms