RNA–Protein interactions for RNA: YHR111W

UBA4, Transcript of E1-like protein that activates Urm1p before urmylation, yeastyeast

Gene UBA4, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBA4YHR111W COQ5P49017 307 aa10.35□□□□□ -0.75
UBA4YHR111W COG7P53195 279 aa10.35□□□□□ -0.75
UBA4YHR111W ACC1Q00955 2233 aaKnown RBP10.35□□□□□ -0.75
UBA4YHR111W PMA2P19657 947 aa10.34□□□□□ -0.75
UBA4YHR111W UTR2P32623 467 aa10.34□□□□□ -0.75
UBA4YHR111W PMT1P33775 817 aa10.34□□□□□ -0.75
UBA4YHR111W MSG5P38590 489 aa10.34□□□□□ -0.75
UBA4YHR111W MMS21P38632 267 aa10.34□□□□□ -0.75
UBA4YHR111W WSC4P38739 605 aa10.34□□□□□ -0.75
UBA4YHR111W SMF1P38925 575 aa10.34□□□□□ -0.75
UBA4YHR111W RGD2P43556 714 aa10.34□□□□□ -0.75
UBA4YHR111W STR3P53101 465 aaKnown RBP10.34□□□□□ -0.75
UBA4YHR111W YGL140CP53120 1219 aa10.34□□□□□ -0.75
UBA4YHR111W GND2P53319 492 aa10.34□□□□□ -0.75
UBA4YHR111W YMR178WQ03219 274 aaKnown RBP10.34□□□□□ -0.75
UBA4YHR111W MSH6Q03834 1242 aa10.34□□□□□ -0.75
UBA4YHR111W RPC11Q04307 110 aaPredicted RBP10.34□□□□□ -0.75
UBA4YHR111W ECI1Q05871 280 aa10.34□□□□□ -0.75
UBA4YHR111W LDB18Q07887 179 aa10.34□□□□□ -0.75
UBA4YHR111W MCM16Q12262 181 aa10.34□□□□□ -0.75
UBA4YHR111W AVL9Q12500 764 aa10.34□□□□□ -0.75
UBA4YHR111W CHL1P22516 861 aaPredicted RBP10.33□□□□□ -0.76
UBA4YHR111W RBK1P25332 333 aa10.33□□□□□ -0.76
UBA4YHR111W PUF4P25339 888 aaKnown RBP RIP-Chip data10.33□□□□□ -0.76not detected
UBA4YHR111W TFB1P32776 642 aa10.33□□□□□ -0.76
UBA4YHR111W YBP1P38315 674 aa10.33□□□□□ -0.76
UBA4YHR111W NDC80P40460 691 aa10.33□□□□□ -0.76
UBA4YHR111W SIP4P46954 829 aa10.33□□□□□ -0.76
UBA4YHR111W IML2P47031 731 aa10.33□□□□□ -0.76
UBA4YHR111W TEP1P53916 434 aa10.33□□□□□ -0.76
UBA4YHR111W CDC14Q00684 551 aa10.33□□□□□ -0.76
UBA4YHR111W SAM4Q08985 325 aaKnown RBP10.33□□□□□ -0.76
UBA4YHR111W ACO1P19414 778 aaKnown RBP RIP-Chip data10.33□□□□□ -0.76not detected
UBA4YHR111W TFA2P36145 328 aa10.33□□□□□ -0.76
UBA4YHR111W BUD13P46947 266 aaPredicted RBP10.33□□□□□ -0.76
UBA4YHR111W SPC105P53148 917 aa10.33□□□□□ -0.76
UBA4YHR111W SIW14P53965 281 aa10.33□□□□□ -0.76
UBA4YHR111W PPN1Q04119 674 aa10.33□□□□□ -0.76
UBA4YHR111W UBR1P19812 1950 aa10.32□□□□□ -0.76
UBA4YHR111W IRA2P19158 3079 aa10.32□□□□□ -0.76
UBA4YHR111W RPL40AP0CH08 128 aaKnown RBP10.32□□□□□ -0.76
UBA4YHR111W RPL40BP0CH09 128 aaKnown RBP10.32□□□□□ -0.76
UBA4YHR111W CDC24P11433 854 aaPredicted RBP10.32□□□□□ -0.76
UBA4YHR111W PMI40P29952 429 aaKnown RBP10.32□□□□□ -0.76
UBA4YHR111W GCD6P32501 712 aaKnown RBP10.32□□□□□ -0.76
UBA4YHR111W SCD5P34758 872 aa10.32□□□□□ -0.76
UBA4YHR111W TIF34P40217 347 aaKnown RBP10.32□□□□□ -0.76
UBA4YHR111W YPR003CP53394 754 aa10.32□□□□□ -0.76
UBA4YHR111W VAC7P53950 1165 aa10.32□□□□□ -0.76
UBA4YHR111W MET14Q02196 202 aa10.32□□□□□ -0.76
UBA4YHR111W RSC4Q02206 625 aa10.32□□□□□ -0.76
UBA4YHR111W RLI1Q03195 608 aaKnown RBP10.32□□□□□ -0.76
UBA4YHR111W URH1Q04179 340 aa10.32□□□□□ -0.76
UBA4YHR111W Q0182Q9ZZW1 134 aa10.32□□□□□ -0.76
UBA4YHR111W QCR6P00127 147 aa10.31□□□□□ -0.76
UBA4YHR111W CLN1P20437 546 aa10.31□□□□□ -0.76
UBA4YHR111W DCC1P25559 380 aa10.31□□□□□ -0.76
UBA4YHR111W BRF1P29056 596 aa10.31□□□□□ -0.76
UBA4YHR111W PBP2P38151 413 aaKnown RBP RIP-Chip data10.31□□□□□ -0.76not detected
UBA4YHR111W MSR1P38714 643 aa10.31□□□□□ -0.76
UBA4YHR111W PFS1P38872 237 aa10.31□□□□□ -0.76
UBA4YHR111W CSN12P47130 423 aa10.31□□□□□ -0.76
UBA4YHR111W PIN2Q12057 282 aa10.31□□□□□ -0.76
UBA4YHR111W GNT1Q12096 491 aa10.31□□□□□ -0.76
UBA4YHR111W NAG1Q8TGN9 163 aa10.31□□□□□ -0.76
UBA4YHR111W YOR338WQ99326 363 aa10.31□□□□□ -0.76
UBA4YHR111W AEP1P32493 518 aa10.3□□□□□ -0.76
UBA4YHR111W POP4P38336 279 aa10.3□□□□□ -0.76
UBA4YHR111W TAE1P38340 232 aa10.3□□□□□ -0.76
UBA4YHR111W MAD1P40957 749 aa10.3□□□□□ -0.76
UBA4YHR111W SET2P46995 733 aaKnown RBP10.3□□□□□ -0.76
UBA4YHR111W MNN10P50108 393 aaKnown RBP10.3□□□□□ -0.76
UBA4YHR111W SLU7Q02775 382 aaKnown RBP10.3□□□□□ -0.76
UBA4YHR111W YDL129WQ07555 291 aa10.3□□□□□ -0.76
UBA4YHR111W MPH2P0CD99 609 aa10.29□□□□□ -0.76
UBA4YHR111W NDI1P32340 513 aa10.29□□□□□ -0.76
UBA4YHR111W KES1P35844 434 aaKnown RBP10.29□□□□□ -0.76
UBA4YHR111W YKL151CP36059 337 aa10.29□□□□□ -0.76
UBA4YHR111W IRS4P36115 615 aaKnown RBP10.29□□□□□ -0.76
UBA4YHR111W VHC1P38329 1120 aa10.29□□□□□ -0.76
UBA4YHR111W LRP1P38801 184 aaKnown RBP10.29□□□□□ -0.76
UBA4YHR111W MTO1P53070 669 aa10.29□□□□□ -0.76
UBA4YHR111W COG1P53079 417 aa10.29□□□□□ -0.76
UBA4YHR111W SNO2P53823 222 aa10.29□□□□□ -0.76
UBA4YHR111W UTP6Q02354 440 aaKnown RBP10.29□□□□□ -0.76
UBA4YHR111W YPL113CQ02961 396 aa10.29□□□□□ -0.76
UBA4YHR111W YMR160WQ03823 816 aa10.29□□□□□ -0.76
UBA4YHR111W YDR131CQ03899 556 aa10.29□□□□□ -0.76
UBA4YHR111W ATG10Q07879 167 aa10.29□□□□□ -0.76
UBA4YHR111W HOS1Q12214 470 aa10.29□□□□□ -0.76
UBA4YHR111W LDB17Q12342 491 aa10.29□□□□□ -0.76
UBA4YHR111W COX3P00420 269 aa10.28□□□□□ -0.76
UBA4YHR111W ERR1P0CX10 437 aa10.28□□□□□ -0.76
UBA4YHR111W ERR2P0CX11 437 aa10.28□□□□□ -0.76
UBA4YHR111W TSR4P25040 408 aa10.28□□□□□ -0.76
UBA4YHR111W EMC1P25574 760 aa10.28□□□□□ -0.76
UBA4YHR111W HEM12P32347 362 aaPredicted RBP10.28□□□□□ -0.76
UBA4YHR111W GCG1P32656 232 aaKnown RBP10.28□□□□□ -0.76
UBA4YHR111W SCC4P40090 624 aa10.28□□□□□ -0.76
UBA4YHR111W YJL070CP40361 888 aa10.28□□□□□ -0.76
Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms