RNA–Protein interactions for RNA: YHR079C

IRE1, Transcript of Serine-threonine kinase and endoribonuclease, yeastyeast

Gene IRE1, Length 3,348 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IRE1YHR079C POL12P38121 705 aaPredicted RBP1.93□□□□□ -2.1
IRE1YHR079C FSH1P38777 243 aaKnown RBP1.93□□□□□ -2.1
IRE1YHR079C CCT3P39077 534 aaKnown RBP1.93□□□□□ -2.1
IRE1YHR079C UBP7P40453 1071 aa1.93□□□□□ -2.1
IRE1YHR079C TMA108P40462 946 aa1.93□□□□□ -2.1
IRE1YHR079C SRB7P47822 140 aa1.93□□□□□ -2.1
IRE1YHR079C MRX6P48564 524 aa1.93□□□□□ -2.1
IRE1YHR079C PHO23P50947 330 aa1.93□□□□□ -2.1
IRE1YHR079C CBK1P53894 756 aa1.93□□□□□ -2.1
IRE1YHR079C RXT3Q07458 294 aa1.93□□□□□ -2.1
IRE1YHR079C YLR040CQ07988 224 aa1.93□□□□□ -2.1
IRE1YHR079C ESC8Q08119 714 aa1.93□□□□□ -2.1
IRE1YHR079C GPN2Q08726 347 aaPredicted RBP1.93□□□□□ -2.1
IRE1YHR079C YOL159C-AQ3E769 90 aa1.93□□□□□ -2.1
IRE1YHR079C SRP54P20424 541 aaKnown RBP1.93□□□□□ -2.1
IRE1YHR079C ERG8P24521 451 aa1.93□□□□□ -2.1
IRE1YHR079C NUP120P35729 1037 aa1.93□□□□□ -2.1
IRE1YHR079C PSF2P40359 213 aa1.93□□□□□ -2.1
IRE1YHR079C FAF1P40546 346 aaPredicted RBP1.93□□□□□ -2.1
IRE1YHR079C COG1P53079 417 aa1.93□□□□□ -2.1
IRE1YHR079C YRB30P53107 440 aaPredicted RBP1.93□□□□□ -2.1
IRE1YHR079C VPS75P53853 264 aa1.93□□□□□ -2.1
IRE1YHR079C YML119WQ03208 357 aa1.93□□□□□ -2.1
IRE1YHR079C HOF1Q05080 669 aa1.93□□□□□ -2.1
IRE1YHR079C ENT4Q07872 247 aa1.93□□□□□ -2.1
IRE1YHR079C SGO1Q08490 590 aa1.93□□□□□ -2.1
IRE1YHR079C NMD4Q12129 218 aa1.93□□□□□ -2.1
IRE1YHR079C COX17Q12287 69 aa1.93□□□□□ -2.1
IRE1YHR079C TY3B-IQ7LHG5 1498 aaKnown RBP1.93□□□□□ -2.1
IRE1YHR079C PCK1P10963 549 aa1.92□□□□□ -2.1
IRE1YHR079C ROX1P25042 368 aa1.92□□□□□ -2.1
IRE1YHR079C RAD16P31244 790 aa1.92□□□□□ -2.1
IRE1YHR079C SLC1P33333 303 aa1.92□□□□□ -2.1
IRE1YHR079C MPT5P39016 859 aaKnown RBP RIP-Chip data1.92□□□□□ -2.1not detected
IRE1YHR079C MIT1P40002 666 aa1.92□□□□□ -2.1
IRE1YHR079C ELO3P40319 345 aa1.92□□□□□ -2.1
IRE1YHR079C DUO1P53168 247 aaKnown RBP1.92□□□□□ -2.1
IRE1YHR079C TMA10Q06177 86 aa1.92□□□□□ -2.1
IRE1YHR079C PSR1Q07800 427 aa1.92□□□□□ -2.1
IRE1YHR079C SCM3Q12334 223 aa1.92□□□□□ -2.1
IRE1YHR079C GRX6Q12438 231 aa1.92□□□□□ -2.1
IRE1YHR079C YPR117WQ06116 2489 aa1.92□□□□□ -2.1
IRE1YHR079C MIS1P09440 975 aaKnown RBP1.92□□□□□ -2.1
IRE1YHR079C CDC5P32562 705 aa1.92□□□□□ -2.1
IRE1YHR079C MFT1P33441 392 aaKnown RBP1.92□□□□□ -2.1
IRE1YHR079C CTP1P38152 299 aa1.92□□□□□ -2.1
IRE1YHR079C ARP1P38696 384 aa1.92□□□□□ -2.1
IRE1YHR079C KAP123P40069 1113 aaKnown RBP1.92□□□□□ -2.1
IRE1YHR079C VFA1P40080 203 aa1.92□□□□□ -2.1
IRE1YHR079C SWP82P43554 623 aa1.92□□□□□ -2.1
IRE1YHR079C YBP2P53169 641 aa1.92□□□□□ -2.1
IRE1YHR079C YGL036WP53185 909 aaPredicted RBP1.92□□□□□ -2.1
IRE1YHR079C RSC1P53236 928 aa1.92□□□□□ -2.1
IRE1YHR079C SLI1P53304 468 aa1.92□□□□□ -2.1
IRE1YHR079C PPN1Q04119 674 aa1.92□□□□□ -2.1
IRE1YHR079C GSF2Q04697 403 aaKnown RBP1.92□□□□□ -2.1
IRE1YHR079C YOL159CQ08300 171 aa1.92□□□□□ -2.1
IRE1YHR079C HOS1Q12214 470 aa1.92□□□□□ -2.1
IRE1YHR079C PRP28P23394 588 aa1.92□□□□□ -2.1
IRE1YHR079C RPC53P25441 422 aa1.92□□□□□ -2.1
IRE1YHR079C ELF1P36053 145 aa1.92□□□□□ -2.1
IRE1YHR079C TAF5P38129 798 aa1.92□□□□□ -2.1
IRE1YHR079C SDH8P38345 138 aa1.92□□□□□ -2.1
IRE1YHR079C CAB2P40506 365 aa1.92□□□□□ -2.1
IRE1YHR079C YIR042CP40586 236 aa1.92□□□□□ -2.1
IRE1YHR079C COX18P53239 316 aa1.92□□□□□ -2.1
IRE1YHR079C CTK1Q03957 528 aaKnown RBP1.92□□□□□ -2.1
IRE1YHR079C MFB1Q04922 465 aa1.92□□□□□ -2.1
IRE1YHR079C YKL033W-AQ86ZR7 236 aa1.92□□□□□ -2.1
IRE1YHR079C PNO1Q99216 274 aaKnown RBP1.92□□□□□ -2.1
IRE1YHR079C YLL066CQ99208 1374 aa1.92□□□□□ -2.1
IRE1YHR079C USO1P25386 1790 aa1.91□□□□□ -2.1
IRE1YHR079C KRS1P15180 591 aaKnown RBP1.91□□□□□ -2.1
IRE1YHR079C YCK1P23291 538 aa1.91□□□□□ -2.1
IRE1YHR079C STE11P23561 717 aa1.91□□□□□ -2.1
IRE1YHR079C PRP22P24384 1145 aaKnown RBP1.91□□□□□ -2.1
IRE1YHR079C CAP1P28495 268 aaKnown RBP1.91□□□□□ -2.1
IRE1YHR079C DEF1P35732 738 aaKnown RBP1.91□□□□□ -2.1
IRE1YHR079C YJL193WP39542 402 aa1.91□□□□□ -2.1
IRE1YHR079C CCT7P42943 550 aaKnown RBP1.91□□□□□ -2.1
IRE1YHR079C SPC98P53540 846 aa1.91□□□□□ -2.1
IRE1YHR079C SQS1P53866 767 aaKnown RBP1.91□□□□□ -2.1
IRE1YHR079C DAK1P54838 584 aaKnown RBP1.91□□□□□ -2.1
IRE1YHR079C YPL071CQ02864 156 aa1.91□□□□□ -2.1
IRE1YHR079C RCO1Q04779 684 aa1.91□□□□□ -2.1
IRE1YHR079C RNQ1P25367 405 aa1.91□□□□□ -2.1
IRE1YHR079C CMK1P27466 446 aaKnown RBP1.91□□□□□ -2.1
IRE1YHR079C SYN8P31377 255 aa1.91□□□□□ -2.1
IRE1YHR079C SAC6P32599 642 aaKnown RBP1.91□□□□□ -2.1
IRE1YHR079C DSS4P32601 143 aa1.91□□□□□ -2.1
IRE1YHR079C FMP52P40008 231 aa1.91□□□□□ -2.1
IRE1YHR079C SPO22P40511 975 aa1.91□□□□□ -2.1
IRE1YHR079C SGN1P40561 250 aaKnown RBP RIP-Chip data1.91□□□□□ -2.1not detected
IRE1YHR079C AAD10P47182 288 aa1.91□□□□□ -2.1
IRE1YHR079C AMA1P50082 593 aa1.91□□□□□ -2.1
IRE1YHR079C SPT20P50875 604 aa1.91□□□□□ -2.1
IRE1YHR079C VPS4P52917 437 aa1.91□□□□□ -2.1
IRE1YHR079C DSD1P53095 428 aa1.91□□□□□ -2.1
IRE1YHR079C RBG2P53295 368 aaKnown RBP1.91□□□□□ -2.1
IRE1YHR079C REG1Q00816 1014 aa1.91□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 49.8 ms