RNA–Protein interactions for RNA: YHR042W

NCP1, Transcript of NADP-cytochrome P450 reductase, yeast

Gene NCP1, Length 2,076 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NCP1	YHR042W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	11.44	□□□□□ -0.58	not detected
NCP1	YHR042W	GLO2	Q05584	274 aa		11.44	□□□□□ -0.58
NCP1	YHR042W	AAD4	Q07747	329 aa		11.44	□□□□□ -0.58
NCP1	YHR042W	RPS10A	Q08745	105 aa	Predicted RBP	11.44	□□□□□ -0.58
NCP1	YHR042W	SBP1	P10080	294 aa	Known RBP	11.44	□□□□□ -0.58
NCP1	YHR042W	ART10	P18634	518 aa	Known RBP	11.44	□□□□□ -0.58
NCP1	YHR042W	HSP60	P19882	572 aa	Known RBP	11.44	□□□□□ -0.58
NCP1	YHR042W	ADE2	P21264	571 aa	Known RBP	11.44	□□□□□ -0.58
NCP1	YHR042W	SEC15	P22224	910 aa		11.44	□□□□□ -0.58
NCP1	YHR042W	MPH1	P40562	993 aa		11.44	□□□□□ -0.58
NCP1	YHR042W	DCP2	P53550	970 aa	Known RBP	11.44	□□□□□ -0.58
NCP1	YHR042W	CUS2	P53830	285 aa	Predicted RBP	11.44	□□□□□ -0.58
NCP1	YHR042W	YNL011C	P53980	444 aa		11.44	□□□□□ -0.58
NCP1	YHR042W	SKI8	Q02793	397 aa	Predicted RBP	11.44	□□□□□ -0.58
NCP1	YHR042W	TIF35	Q04067	274 aa	Known RBP	11.44	□□□□□ -0.58
NCP1	YHR042W	RSA3	Q05942	220 aa	Known RBP	11.44	□□□□□ -0.58
NCP1	YHR042W	RSC2	Q06488	889 aa		11.44	□□□□□ -0.58
NCP1	YHR042W	BUD20	Q08004	166 aa	Predicted RBP	11.44	□□□□□ -0.58
NCP1	YHR042W	SPE1	P08432	466 aa		11.43	□□□□□ -0.58
NCP1	YHR042W	NDI1	P32340	513 aa		11.43	□□□□□ -0.58
NCP1	YHR042W	INP51	P40559	946 aa	Known RBP	11.43	□□□□□ -0.58
NCP1	YHR042W	CIT2	P08679	460 aa		11.42	□□□□□ -0.58
NCP1	YHR042W	APE1	P14904	514 aa		11.42	□□□□□ -0.58
NCP1	YHR042W	MET16	P18408	261 aa	Predicted RBP	11.42	□□□□□ -0.58
NCP1	YHR042W	MSB1	P21339	1137 aa	Known RBP	11.42	□□□□□ -0.58
NCP1	YHR042W	VPS3	P23643	1011 aa		11.42	□□□□□ -0.58
NCP1	YHR042W	RSA4	P25382	515 aa	Known RBP	11.42	□□□□□ -0.58
NCP1	YHR042W	RPL5	P26321	297 aa	Known RBP	11.42	□□□□□ -0.58
NCP1	YHR042W	TFC1	P32367	649 aa		11.42	□□□□□ -0.58
NCP1	YHR042W	FSH1	P38777	243 aa	Known RBP	11.42	□□□□□ -0.58
NCP1	YHR042W	LAM1	P38851	1228 aa		11.42	□□□□□ -0.58
NCP1	YHR042W	CDC1	P40986	491 aa		11.42	□□□□□ -0.58
NCP1	YHR042W	ISM1	P48526	1002 aa		11.42	□□□□□ -0.58
NCP1	YHR042W	TRF5	P48561	642 aa	Known RBP	11.42	□□□□□ -0.58
NCP1	YHR042W	PEX31	P53203	462 aa		11.42	□□□□□ -0.58
NCP1	YHR042W	SPC2	Q04969	178 aa		11.42	□□□□□ -0.58
NCP1	YHR042W	YPR097W	Q06839	1073 aa		11.42	□□□□□ -0.58
NCP1	YHR042W	TY3A-G	Q12173	290 aa		11.42	□□□□□ -0.58
NCP1	YHR042W	YOR022C	Q12204	715 aa		11.42	□□□□□ -0.58
NCP1	YHR042W	TY3A-I	Q99219	290 aa		11.42	□□□□□ -0.58
NCP1	YHR042W	INO1	P11986	533 aa		11.42	□□□□□ -0.58
NCP1	YHR042W	ATP12	P22135	325 aa		11.42	□□□□□ -0.58
NCP1	YHR042W	AMD2	P22580	549 aa		11.42	□□□□□ -0.58
NCP1	YHR042W	DBP1	P24784	617 aa	Known RBP	11.42	□□□□□ -0.58
NCP1	YHR042W	MSH2	P25847	964 aa		11.42	□□□□□ -0.58
NCP1	YHR042W	UBX7	P38349	436 aa		11.42	□□□□□ -0.58
NCP1	YHR042W	YHR182W	P38870	785 aa		11.42	□□□□□ -0.58
NCP1	YHR042W	YEL028W	P39989	153 aa		11.42	□□□□□ -0.58
NCP1	YHR042W	SKP2	P42843	763 aa		11.42	□□□□□ -0.58
NCP1	YHR042W	FMP32	P43557	207 aa		11.42	□□□□□ -0.58
NCP1	YHR042W	RSC8	P43609	557 aa	Known RBP	11.42	□□□□□ -0.58
NCP1	YHR042W	YPL062W	Q02781	134 aa		11.42	□□□□□ -0.58
NCP1	YHR042W	YIG1	Q08956	461 aa		11.42	□□□□□ -0.58
NCP1	YHR042W	SPE3	Q12074	293 aa	Known RBP	11.42	□□□□□ -0.58
NCP1	YHR042W	TAL1	P15019	335 aa	Known RBP	11.41	□□□□□ -0.58
NCP1	YHR042W	TYR1	P20049	452 aa		11.41	□□□□□ -0.58
NCP1	YHR042W	RIM1	P32445	135 aa	Known RBP	11.41	□□□□□ -0.58
NCP1	YHR042W	PEP12	P32854	288 aa		11.41	□□□□□ -0.58
NCP1	YHR042W	BNA3	P47039	444 aa	Known RBP	11.41	□□□□□ -0.58
NCP1	YHR042W	TIM13	P53299	105 aa		11.41	□□□□□ -0.58
NCP1	YHR042W	YNL134C	P53912	376 aa	Known RBP	11.41	□□□□□ -0.58
NCP1	YHR042W	YNL115C	P53925	644 aa		11.41	□□□□□ -0.58
NCP1	YHR042W	STP1	Q00947	519 aa		11.41	□□□□□ -0.58
NCP1	YHR042W	NHX1	Q04121	633 aa		11.41	□□□□□ -0.58
NCP1	YHR042W	SPG3	Q04398	127 aa	Predicted RBP	11.41	□□□□□ -0.58
NCP1	YHR042W	NSE1	Q07913	336 aa		11.41	□□□□□ -0.58
NCP1	YHR042W	SAM3	Q08986	587 aa		11.41	□□□□□ -0.58
NCP1	YHR042W	TPK1	P06244	397 aa		11.4	□□□□□ -0.58
NCP1	YHR042W	ADY2	P25613	283 aa		11.4	□□□□□ -0.58
NCP1	YHR042W	VPH2	P32341	215 aa		11.4	□□□□□ -0.58
NCP1	YHR042W	SPT16	P32558	1035 aa	Known RBP	11.4	□□□□□ -0.58
NCP1	YHR042W	SMI1	P32566	505 aa		11.4	□□□□□ -0.58
NCP1	YHR042W	TIM23	P32897	222 aa		11.4	□□□□□ -0.58
NCP1	YHR042W	SRP101	P32916	621 aa		11.4	□□□□□ -0.58
NCP1	YHR042W	CSE2	P33308	149 aa		11.4	□□□□□ -0.58
NCP1	YHR042W	DRE2	P36152	348 aa		11.4	□□□□□ -0.58
NCP1	YHR042W	SPR3	P41901	512 aa		11.4	□□□□□ -0.58
NCP1	YHR042W	DYN3	Q04949	312 aa		11.4	□□□□□ -0.58
NCP1	YHR042W	MET7	Q08645	548 aa		11.4	□□□□□ -0.58
NCP1	YHR042W	SUI3	P09064	285 aa	Known RBP	11.4	□□□□□ -0.58
NCP1	YHR042W	GLN4	P13188	809 aa	Known RBP	11.4	□□□□□ -0.58
NCP1	YHR042W	RAD51	P25454	400 aa		11.4	□□□□□ -0.58
NCP1	YHR042W	PUP2	P32379	260 aa		11.4	□□□□□ -0.58
NCP1	YHR042W	BEM3	P32873	1128 aa		11.4	□□□□□ -0.58
NCP1	YHR042W	PTH2	P34222	208 aa		11.4	□□□□□ -0.58
NCP1	YHR042W	DNL4	Q08387	944 aa	Predicted RBP	11.4	□□□□□ -0.58
NCP1	YHR042W	NBP2	Q12163	236 aa		11.4	□□□□□ -0.58
NCP1	YHR042W	ARP7	Q12406	477 aa		11.4	□□□□□ -0.58
NCP1	YHR042W	SEM1	O94742	89 aa		11.39	□□□□□ -0.59
NCP1	YHR042W	MRS6	P32864	603 aa	Known RBP	11.39	□□□□□ -0.59
NCP1	YHR042W	GPT2	P36148	743 aa		11.39	□□□□□ -0.59
NCP1	YHR042W	PRM9	P39551	298 aa		11.39	□□□□□ -0.59
NCP1	YHR042W	CCT7	P42943	550 aa	Known RBP	11.39	□□□□□ -0.59
NCP1	YHR042W	HPT1	Q04178	221 aa	Known RBP	11.39	□□□□□ -0.59
NCP1	YHR042W	BEM1	P29366	551 aa		11.39	□□□□□ -0.59
NCP1	YHR042W	NGG1	P32494	702 aa		11.39	□□□□□ -0.59
NCP1	YHR042W	SPC42	P36094	363 aa		11.39	□□□□□ -0.59
NCP1	YHR042W	RIM11	P38615	370 aa		11.39	□□□□□ -0.59
NCP1	YHR042W	GND2	P53319	492 aa		11.39	□□□□□ -0.59
NCP1	YHR042W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	11.39	□□□□□ -0.59	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms