RNA–Protein interactions for RNA: YFL047W

RGD2, Transcript of GTPase-activating protein (RhoGAP) for Cdc42p and Rho5p, yeastyeast

Gene RGD2, Length 2,145 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RGD2YFL047W REX2P54964 269 aaKnown RBP6.78□□□□□ -1.32
RGD2YFL047W CSN9Q03981 162 aa6.78□□□□□ -1.32
RGD2YFL047W GET4Q12125 312 aa6.78□□□□□ -1.32
RGD2YFL047W TPK1P06244 397 aa6.77□□□□□ -1.33
RGD2YFL047W STE6P12866 1290 aa6.77□□□□□ -1.33
RGD2YFL047W HSC82P15108 705 aaKnown RBP6.77□□□□□ -1.33
RGD2YFL047W TYR1P20049 452 aa6.77□□□□□ -1.33
RGD2YFL047W RAD51P25454 400 aa6.77□□□□□ -1.33
RGD2YFL047W KDX1P36005 433 aa6.77□□□□□ -1.33
RGD2YFL047W UBX7P38349 436 aa6.77□□□□□ -1.33
RGD2YFL047W NPT1P39683 429 aaKnown RBP6.77□□□□□ -1.33
RGD2YFL047W AZR1P50080 613 aa6.77□□□□□ -1.33
RGD2YFL047W GND2P53319 492 aa6.77□□□□□ -1.33
RGD2YFL047W YNL011CP53980 444 aa6.77□□□□□ -1.33
RGD2YFL047W YML020WQ03722 664 aa6.77□□□□□ -1.33
RGD2YFL047W BUD20Q08004 166 aaPredicted RBP6.77□□□□□ -1.33
RGD2YFL047W MCH5Q08777 521 aa6.77□□□□□ -1.33
RGD2YFL047W PEX5P35056 612 aa6.77□□□□□ -1.33
RGD2YFL047W MEF2P39677 819 aa6.77□□□□□ -1.33
RGD2YFL047W YJL132WP47014 750 aa6.77□□□□□ -1.33
RGD2YFL047W DCP2P53550 970 aaKnown RBP6.77□□□□□ -1.33
RGD2YFL047W NRD1P53617 575 aaKnown RBP RIP-Chip data6.77□□□□□ -1.33not detected
RGD2YFL047W CUS2P53830 285 aaPredicted RBP6.77□□□□□ -1.33
RGD2YFL047W DOS2P54858 310 aa6.77□□□□□ -1.33
RGD2YFL047W ARA2Q04212 335 aa6.77□□□□□ -1.33
RGD2YFL047W TYW1Q08960 810 aaKnown RBP6.77□□□□□ -1.33
RGD2YFL047W TY3A-GQ12173 290 aa6.77□□□□□ -1.33
RGD2YFL047W TY3A-IQ99219 290 aa6.77□□□□□ -1.33
RGD2YFL047W LAA1P39526 2014 aa6.76□□□□□ -1.33
RGD2YFL047W SPE1P08432 466 aa6.76□□□□□ -1.33
RGD2YFL047W ERG20P08524 352 aaKnown RBP6.76□□□□□ -1.33
RGD2YFL047W ATP12P22135 325 aa6.76□□□□□ -1.33
RGD2YFL047W GCD11P32481 527 aaKnown RBP6.76□□□□□ -1.33
RGD2YFL047W AEP1P32493 518 aa6.76□□□□□ -1.33
RGD2YFL047W BCK2P33306 851 aa6.76□□□□□ -1.33
RGD2YFL047W PTC1P35182 281 aa6.76□□□□□ -1.33
RGD2YFL047W SRP68P38687 599 aaKnown RBP6.76□□□□□ -1.33
RGD2YFL047W FSH1P38777 243 aaKnown RBP6.76□□□□□ -1.33
RGD2YFL047W YHR182WP38870 785 aa6.76□□□□□ -1.33
RGD2YFL047W CCT7P42943 550 aaKnown RBP6.76□□□□□ -1.33
RGD2YFL047W FMP32P43557 207 aa6.76□□□□□ -1.33
RGD2YFL047W GUF1P46943 645 aa6.76□□□□□ -1.33
RGD2YFL047W BNA3P47039 444 aaKnown RBP6.76□□□□□ -1.33
RGD2YFL047W TRF5P48561 642 aaKnown RBP6.76□□□□□ -1.33
RGD2YFL047W AIF1P52923 378 aa6.76□□□□□ -1.33
RGD2YFL047W NAN1Q02931 896 aaKnown RBP6.76□□□□□ -1.33
RGD2YFL047W TIF35Q04067 274 aaKnown RBP6.76□□□□□ -1.33
RGD2YFL047W NHX1Q04121 633 aa6.76□□□□□ -1.33
RGD2YFL047W SPC2Q04969 178 aa6.76□□□□□ -1.33
RGD2YFL047W HDA3Q06623 655 aa6.76□□□□□ -1.33
RGD2YFL047W NSE1Q07913 336 aa6.76□□□□□ -1.33
RGD2YFL047W DDC1Q08949 612 aa6.76□□□□□ -1.33
RGD2YFL047W SPE3Q12074 293 aaKnown RBP6.76□□□□□ -1.33
RGD2YFL047W ADY2P25613 283 aa6.76□□□□□ -1.33
RGD2YFL047W CYS3P31373 394 aaKnown RBP6.76□□□□□ -1.33
RGD2YFL047W ASK1P35734 292 aa6.76□□□□□ -1.33
RGD2YFL047W YAP1801P38856 637 aa6.76□□□□□ -1.33
RGD2YFL047W IAH1P41734 238 aa6.76□□□□□ -1.33
RGD2YFL047W RPS10BP46784 105 aaKnown RBP6.76□□□□□ -1.33
RGD2YFL047W YNL115CP53925 644 aa6.76□□□□□ -1.33
RGD2YFL047W YDR179W-AQ03983 463 aa6.76□□□□□ -1.33
RGD2YFL047W ATG17Q06410 417 aa6.76□□□□□ -1.33
RGD2YFL047W YEH2Q07950 538 aa6.76□□□□□ -1.33
RGD2YFL047W RPS10AQ08745 105 aaPredicted RBP6.76□□□□□ -1.33
RGD2YFL047W ATR1P13090 542 aa6.75□□□□□ -1.33
RGD2YFL047W MET16P18408 261 aaPredicted RBP6.75□□□□□ -1.33
RGD2YFL047W SEC15P22224 910 aa6.75□□□□□ -1.33
RGD2YFL047W RSA4P25382 515 aaKnown RBP6.75□□□□□ -1.33
RGD2YFL047W VRP1P37370 817 aa6.75□□□□□ -1.33
RGD2YFL047W GIP1P38229 639 aa6.75□□□□□ -1.33
RGD2YFL047W PRM9P39551 298 aa6.75□□□□□ -1.33
RGD2YFL047W YEL028WP39989 153 aa6.75□□□□□ -1.33
RGD2YFL047W MXR1P40029 184 aa6.75□□□□□ -1.33
RGD2YFL047W PRM2P40534 656 aa6.75□□□□□ -1.33
RGD2YFL047W MPH1P40562 993 aa6.75□□□□□ -1.33
RGD2YFL047W CDC1P40986 491 aa6.75□□□□□ -1.33
RGD2YFL047W GCN20P43535 752 aaKnown RBP6.75□□□□□ -1.33
RGD2YFL047W RSC8P43609 557 aaKnown RBP6.75□□□□□ -1.33
RGD2YFL047W PXR1P53335 271 aaPredicted RBP6.75□□□□□ -1.33
RGD2YFL047W STP1Q00947 519 aa6.75□□□□□ -1.33
RGD2YFL047W DYN3Q04949 312 aa6.75□□□□□ -1.33
RGD2YFL047W AAD4Q07747 329 aa6.75□□□□□ -1.33
RGD2YFL047W YOR022CQ12204 715 aa6.75□□□□□ -1.33
RGD2YFL047W PUF2Q12221 1075 aaKnown RBP RIP-Chip data6.75□□□□□ -1.33not detected
RGD2YFL047W HSH49Q99181 213 aaPredicted RBP6.75□□□□□ -1.33
RGD2YFL047W COX6P00427 148 aa6.74□□□□□ -1.33
RGD2YFL047W SUI3P09064 285 aaKnown RBP6.74□□□□□ -1.33
RGD2YFL047W HVG1P0CE11 249 aa6.74□□□□□ -1.33
RGD2YFL047W SBP1P10080 294 aaKnown RBP6.74□□□□□ -1.33
RGD2YFL047W GLN4P13188 809 aaKnown RBP6.74□□□□□ -1.33
RGD2YFL047W AFT1P22149 690 aa6.74□□□□□ -1.33
RGD2YFL047W DBP1P24784 617 aaKnown RBP6.74□□□□□ -1.33
RGD2YFL047W NDI1P32340 513 aa6.74□□□□□ -1.33
RGD2YFL047W ARN1P38731 627 aa6.74□□□□□ -1.33
RGD2YFL047W SKP2P42843 763 aa6.74□□□□□ -1.33
RGD2YFL047W VMA10P48836 114 aaKnown RBP6.74□□□□□ -1.33
RGD2YFL047W YGL108CP53139 140 aa6.74□□□□□ -1.33
RGD2YFL047W SKI8Q02793 397 aaPredicted RBP6.74□□□□□ -1.33
RGD2YFL047W CDA1Q06702 301 aa6.74□□□□□ -1.33
RGD2YFL047W SWC7Q06707 132 aa6.74□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms