RNA–Protein interactions for RNA: YDR498C

SEC20, Transcript of Membrane glycoprotein v-SNARE, yeastyeast

Gene SEC20, Length 1,152 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC20YDR498C YMR209CQ03648 457 aa5.86□□□□□ -1.47
SEC20YDR498C STB3Q12427 513 aa5.86□□□□□ -1.47
SEC20YDR498C RMD5Q12508 421 aa5.86□□□□□ -1.47
SEC20YDR498C NOT5Q12514 560 aaPredicted RBP5.86□□□□□ -1.47
SEC20YDR498C COX5AP00424 153 aa5.85□□□□□ -1.47
SEC20YDR498C YIH1P25637 258 aa5.85□□□□□ -1.47
SEC20YDR498C SPT5P27692 1063 aaKnown RBP5.85□□□□□ -1.47
SEC20YDR498C GUT2P32191 649 aa5.85□□□□□ -1.47
SEC20YDR498C RFC3P38629 340 aa5.85□□□□□ -1.47
SEC20YDR498C ERP5P38819 212 aa5.85□□□□□ -1.47
SEC20YDR498C LIN1P38852 340 aaPredicted RBP5.85□□□□□ -1.47
SEC20YDR498C STN1P38960 494 aa5.85□□□□□ -1.47
SEC20YDR498C PRM9P39551 298 aa5.85□□□□□ -1.47
SEC20YDR498C YEL028WP39989 153 aa5.85□□□□□ -1.47
SEC20YDR498C EDC3P39998 551 aaKnown RBP5.85□□□□□ -1.47
SEC20YDR498C PEP8P40335 379 aa5.85□□□□□ -1.47
SEC20YDR498C YFL052WP43551 465 aa5.85□□□□□ -1.47
SEC20YDR498C RPS10BP46784 105 aaKnown RBP5.85□□□□□ -1.47
SEC20YDR498C NUT1P53114 1132 aa5.85□□□□□ -1.47
SEC20YDR498C VPS9P54787 451 aa5.85□□□□□ -1.47
SEC20YDR498C CEG1Q01159 459 aaPredicted RBP5.85□□□□□ -1.47
SEC20YDR498C RPS10AQ08745 105 aaPredicted RBP5.85□□□□□ -1.47
SEC20YDR498C LEA1Q08963 238 aaPredicted RBP5.85□□□□□ -1.47
SEC20YDR498C APC9Q12107 265 aa5.85□□□□□ -1.47
SEC20YDR498C STT4P37297 1900 aa5.85□□□□□ -1.47
SEC20YDR498C RAD3P06839 778 aa5.84□□□□□ -1.47
SEC20YDR498C GAL11P19659 1081 aa5.84□□□□□ -1.47
SEC20YDR498C AAD3P25612 363 aa5.84□□□□□ -1.47
SEC20YDR498C ADY2P25613 283 aa5.84□□□□□ -1.47
SEC20YDR498C URA10P30402 227 aa5.84□□□□□ -1.47
SEC20YDR498C ISF1P32488 338 aa5.84□□□□□ -1.47
SEC20YDR498C SMI1P32566 505 aa5.84□□□□□ -1.47
SEC20YDR498C RIM2P38127 377 aa5.84□□□□□ -1.47
SEC20YDR498C YHI9P38765 294 aa5.84□□□□□ -1.47
SEC20YDR498C LAM1P38851 1228 aa5.84□□□□□ -1.47
SEC20YDR498C DPH1P40487 425 aaKnown RBP5.84□□□□□ -1.47
SEC20YDR498C CNN1P43618 361 aa5.84□□□□□ -1.47
SEC20YDR498C MAD3P47074 515 aa5.84□□□□□ -1.47
SEC20YDR498C ASN2P49090 572 aaKnown RBP5.84□□□□□ -1.47
SEC20YDR498C SLU7Q02775 382 aaKnown RBP5.84□□□□□ -1.47
SEC20YDR498C FMP30Q02883 468 aa5.84□□□□□ -1.47
SEC20YDR498C YPL034WQ03083 165 aa5.84□□□□□ -1.47
SEC20YDR498C MSH6Q03834 1242 aa5.84□□□□□ -1.47
SEC20YDR498C SWC7Q06707 132 aa5.84□□□□□ -1.47
SEC20YDR498C AAD4Q07747 329 aa5.84□□□□□ -1.47
SEC20YDR498C TMA46Q12000 345 aaKnown RBP5.84□□□□□ -1.47
SEC20YDR498C ARP7Q12406 477 aa5.84□□□□□ -1.47
SEC20YDR498C EFG1Q3E705 233 aaKnown RBP5.84□□□□□ -1.47
SEC20YDR498C YPT6Q99260 215 aa5.84□□□□□ -1.47
SEC20YDR498C ERG20P08524 352 aaKnown RBP5.83□□□□□ -1.48
SEC20YDR498C VAN1P23642 535 aa5.83□□□□□ -1.48
SEC20YDR498C RAD27P26793 382 aa5.83□□□□□ -1.48
SEC20YDR498C MET4P32389 672 aa5.83□□□□□ -1.48
SEC20YDR498C SIP2P34164 415 aaKnown RBP5.83□□□□□ -1.48
SEC20YDR498C KES1P35844 434 aaKnown RBP5.83□□□□□ -1.48
SEC20YDR498C YKR051WP36142 418 aa5.83□□□□□ -1.48
SEC20YDR498C YBR225WP38321 900 aa5.83□□□□□ -1.48
SEC20YDR498C PHO89P38361 574 aa5.83□□□□□ -1.48
SEC20YDR498C SEO1P39709 593 aa5.83□□□□□ -1.48
SEC20YDR498C MGS1P40151 587 aa5.83□□□□□ -1.48
SEC20YDR498C ELO3P40319 345 aa5.83□□□□□ -1.48
SEC20YDR498C YFL040WP43562 540 aa5.83□□□□□ -1.48
SEC20YDR498C SPO74P45819 413 aa5.83□□□□□ -1.48
SEC20YDR498C UTP8P53276 713 aaKnown RBP5.83□□□□□ -1.48
SEC20YDR498C TIM13P53299 105 aa5.83□□□□□ -1.48
SEC20YDR498C TRM112P53738 135 aaPredicted RBP5.83□□□□□ -1.48
SEC20YDR498C OSH6Q02201 448 aa5.83□□□□□ -1.48
SEC20YDR498C ADI1Q03677 179 aa5.83□□□□□ -1.48
SEC20YDR498C FMN1Q03778 218 aa5.83□□□□□ -1.48
SEC20YDR498C YPR084WQ06821 456 aa5.83□□□□□ -1.48
SEC20YDR498C YOR387CQ08910 206 aa5.83□□□□□ -1.48
SEC20YDR498C SPE4Q12455 300 aa5.83□□□□□ -1.48
SEC20YDR498C YLR149CQ99296 730 aa5.83□□□□□ -1.48
SEC20YDR498C PRC1P00729 532 aa5.82□□□□□ -1.48
SEC20YDR498C GPA2P10823 449 aa5.82□□□□□ -1.48
SEC20YDR498C GLN4P13188 809 aaKnown RBP5.82□□□□□ -1.48
SEC20YDR498C APE1P14904 514 aa5.82□□□□□ -1.48
SEC20YDR498C ACO1P19414 778 aaKnown RBP RIP-Chip data5.82□□□□□ -1.48not detected
SEC20YDR498C YCL068CP25593 260 aa5.82□□□□□ -1.48
SEC20YDR498C DAL1P32375 460 aa5.82□□□□□ -1.48
SEC20YDR498C MRT4P33201 236 aaKnown RBP5.82□□□□□ -1.48
SEC20YDR498C COY1P34237 679 aa5.82□□□□□ -1.48
SEC20YDR498C KAP104P38217 918 aaKnown RBP5.82□□□□□ -1.48
SEC20YDR498C URA8P38627 578 aaPredicted RBP5.82□□□□□ -1.48
SEC20YDR498C FIR1P40020 876 aa5.82□□□□□ -1.48
SEC20YDR498C RPL34BP40525 121 aaKnown RBP5.82□□□□□ -1.48
SEC20YDR498C YIR007WP40566 764 aa5.82□□□□□ -1.48
SEC20YDR498C YIR016WP40572 265 aa5.82□□□□□ -1.48
SEC20YDR498C AXL1P40851 1208 aa5.82□□□□□ -1.48
SEC20YDR498C TRF5P48561 642 aaKnown RBP5.82□□□□□ -1.48
SEC20YDR498C TAF6P53040 516 aa5.82□□□□□ -1.48
SEC20YDR498C HOT1Q03213 719 aa5.82□□□□□ -1.48
SEC20YDR498C GCN5Q03330 439 aa5.82□□□□□ -1.48
SEC20YDR498C RPN4Q03465 531 aa5.82□□□□□ -1.48
SEC20YDR498C INP2Q03824 705 aa5.82□□□□□ -1.48
SEC20YDR498C CDC123Q05791 360 aa5.82□□□□□ -1.48
SEC20YDR498C YSH1Q06224 779 aaPredicted RBP5.82□□□□□ -1.48
SEC20YDR498C APC5Q08683 685 aa5.82□□□□□ -1.48
SEC20YDR498C AFI1Q99222 893 aa5.82□□□□□ -1.48
SEC20YDR498C HIP1P06775 603 aa5.81□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms