RNA–Protein interactions for RNA: YDL220C

CDC13, Transcript of Single stranded DNA-binding protein found at TG1-3 telomere G-tails, yeast

Gene CDC13, Length 2,775 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC13	YDL220C	SEO1	P39709	593 aa		7.17	□□□□□ -1.26
CDC13	YDL220C	YAT2	P40017	923 aa		7.17	□□□□□ -1.26
CDC13	YDL220C	EMP65	P40085	556 aa		7.17	□□□□□ -1.26
CDC13	YDL220C	YJL016W	P47072	561 aa		7.17	□□□□□ -1.26
CDC13	YDL220C	EMC2	P47133	292 aa	Known RBP	7.17	□□□□□ -1.26
CDC13	YDL220C	UPF3	P48412	387 aa	Known RBP	7.17	□□□□□ -1.26
CDC13	YDL220C	VHS1	Q03785	461 aa		7.17	□□□□□ -1.26
CDC13	YDL220C	SWA2	Q06677	668 aa		7.17	□□□□□ -1.26
CDC13	YDL220C	YSP3	P25036	478 aa		7.17	□□□□□ -1.26
CDC13	YDL220C	KTR1	P27810	393 aa	Known RBP	7.17	□□□□□ -1.26
CDC13	YDL220C	AKL1	P38080	1108 aa	Known RBP	7.17	□□□□□ -1.26
CDC13	YDL220C	IMD2	P38697	523 aa	Known RBP	7.17	□□□□□ -1.26
CDC13	YDL220C	RIM4	P38741	713 aa		7.17	□□□□□ -1.26
CDC13	YDL220C	BCD1	P38772	366 aa		7.17	□□□□□ -1.26
CDC13	YDL220C	MNN9	P39107	395 aa	Known RBP	7.17	□□□□□ -1.26
CDC13	YDL220C	AIM2	P39721	246 aa		7.17	□□□□□ -1.26
CDC13	YDL220C	YIL055C	P40523	627 aa	Known RBP	7.17	□□□□□ -1.26
CDC13	YDL220C	YJR141W	P47172	347 aa	Predicted RBP	7.17	□□□□□ -1.26
CDC13	YDL220C	RAI1	P53063	387 aa	Known RBP	7.17	□□□□□ -1.26
CDC13	YDL220C	RRP17	Q04031	235 aa	Predicted RBP	7.17	□□□□□ -1.26
CDC13	YDL220C	IVY1	Q04934	453 aa		7.17	□□□□□ -1.26
CDC13	YDL220C	YPR196W	Q06595	470 aa		7.17	□□□□□ -1.26
CDC13	YDL220C	ISA1	Q07821	250 aa	Predicted RBP	7.17	□□□□□ -1.26
CDC13	YDL220C	PSR2	Q07949	397 aa		7.17	□□□□□ -1.26
CDC13	YDL220C	SKI7	Q08491	747 aa	Predicted RBP	7.17	□□□□□ -1.26
CDC13	YDL220C	THS1	P04801	734 aa	Known RBP	7.16	□□□□□ -1.26
CDC13	YDL220C	ILV2	P07342	687 aa	Known RBP	7.16	□□□□□ -1.26
CDC13	YDL220C	ERG11	P10614	530 aa		7.16	□□□□□ -1.26
CDC13	YDL220C	GLK1	P17709	500 aa	Known RBP	7.16	□□□□□ -1.26
CDC13	YDL220C	RPL6A	Q02326	176 aa	Known RBP	7.16	□□□□□ -1.26
CDC13	YDL220C	ASA1	Q06822	443 aa		7.16	□□□□□ -1.26
CDC13	YDL220C	IWR1	Q07532	353 aa	Predicted RBP	7.16	□□□□□ -1.26
CDC13	YDL220C	YPD1	Q07688	167 aa		7.16	□□□□□ -1.26
CDC13	YDL220C	FLC1	Q08967	793 aa		7.16	□□□□□ -1.26
CDC13	YDL220C	YPR202W	Q08993	238 aa		7.16	□□□□□ -1.26
CDC13	YDL220C	WRS1	Q12109	432 aa	Known RBP	7.16	□□□□□ -1.26
CDC13	YDL220C	ADR1	P07248	1323 aa		7.16	□□□□□ -1.26
CDC13	YDL220C	RPP1A	P05318	106 aa	Predicted RBP	7.16	□□□□□ -1.26
CDC13	YDL220C	PBS2	P08018	668 aa		7.16	□□□□□ -1.26
CDC13	YDL220C	ASF2	P32448	525 aa	Predicted RBP	7.16	□□□□□ -1.26
CDC13	YDL220C	GRX7	P38068	203 aa		7.16	□□□□□ -1.26
CDC13	YDL220C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	7.16	□□□□□ -1.26	not detected
CDC13	YDL220C	RIM11	P38615	370 aa		7.16	□□□□□ -1.26
CDC13	YDL220C	GLO3	P38682	493 aa	Known RBP	7.16	□□□□□ -1.26
CDC13	YDL220C	YHR078W	P38799	552 aa		7.16	□□□□□ -1.26
CDC13	YDL220C	SSO2	P39926	295 aa		7.16	□□□□□ -1.26
CDC13	YDL220C	PIG2	P40187	538 aa		7.16	□□□□□ -1.26
CDC13	YDL220C	AIP1	P46680	615 aa	Known RBP	7.16	□□□□□ -1.26
CDC13	YDL220C	SEH1	P53011	349 aa	Known RBP	7.16	□□□□□ -1.26
CDC13	YDL220C	HPC2	Q01448	625 aa		7.16	□□□□□ -1.26
CDC13	YDL220C	MUK1	Q02866	612 aa		7.16	□□□□□ -1.26
CDC13	YDL220C	CWC21	Q03375	135 aa	Known RBP	7.16	□□□□□ -1.26
CDC13	YDL220C	YMR027W	Q04371	470 aa		7.16	□□□□□ -1.26
CDC13	YDL220C	VTA1	Q06263	330 aa		7.16	□□□□□ -1.26
CDC13	YDL220C	ATG34	Q12292	412 aa		7.16	□□□□□ -1.26
CDC13	YDL220C	SKM1	Q12469	655 aa		7.16	□□□□□ -1.26
CDC13	YDL220C	ATG11	Q12527	1178 aa		7.16	□□□□□ -1.26
CDC13	YDL220C	STE3	P06783	470 aa		7.15	□□□□□ -1.26
CDC13	YDL220C	IDI1	P15496	288 aa		7.15	□□□□□ -1.26
CDC13	YDL220C	DAL80	P26343	269 aa		7.15	□□□□□ -1.26
CDC13	YDL220C	CCR4	P31384	837 aa	Known RBP	7.15	□□□□□ -1.26
CDC13	YDL220C	KTR3	P38130	404 aa	Predicted RBP	7.15	□□□□□ -1.26
CDC13	YDL220C	KTR4	P38131	464 aa		7.15	□□□□□ -1.26
CDC13	YDL220C	HSH155	P49955	971 aa	Known RBP	7.15	□□□□□ -1.26
CDC13	YDL220C	ARP10	Q04549	284 aa		7.15	□□□□□ -1.26
CDC13	YDL220C	DUS3	Q06053	668 aa	Known RBP	7.15	□□□□□ -1.26
CDC13	YDL220C	OXR1	Q08952	273 aa		7.15	□□□□□ -1.26
CDC13	YDL220C	PHO4	P07270	312 aa	Known RBP	7.15	□□□□□ -1.26
CDC13	YDL220C	PRI1	P10363	409 aa		7.15	□□□□□ -1.26
CDC13	YDL220C	PDC5	P16467	563 aa	Known RBP	7.15	□□□□□ -1.26
CDC13	YDL220C	RRT12	P25381	491 aa		7.15	□□□□□ -1.26
CDC13	YDL220C	RPS7A	P26786	190 aa	Known RBP	7.15	□□□□□ -1.26
CDC13	YDL220C	YKL077W	P36081	392 aa		7.15	□□□□□ -1.26
CDC13	YDL220C	ARA1	P38115	344 aa		7.15	□□□□□ -1.26
CDC13	YDL220C	MCM7	P38132	845 aa		7.15	□□□□□ -1.26
CDC13	YDL220C	GIC1	P38785	314 aa		7.15	□□□□□ -1.26
CDC13	YDL220C	ERG10	P41338	398 aa	Known RBP	7.15	□□□□□ -1.26
CDC13	YDL220C	TAD1	P53065	400 aa		7.15	□□□□□ -1.26
CDC13	YDL220C	COG5	P53951	403 aa		7.15	□□□□□ -1.26
CDC13	YDL220C	YMR279C	Q03263	540 aa		7.15	□□□□□ -1.26
CDC13	YDL220C	PDR8	Q06149	701 aa		7.15	□□□□□ -1.26
CDC13	YDL220C	YCL001W-B	Q96VH2	84 aa		7.15	□□□□□ -1.26
CDC13	YDL220C	ATP6	P00854	259 aa		7.14	□□□□□ -1.27
CDC13	YDL220C	HO	P09932	586 aa		7.14	□□□□□ -1.27
CDC13	YDL220C	NUP2	P32499	720 aa		7.14	□□□□□ -1.27
CDC13	YDL220C	CDS1	P38221	457 aa		7.14	□□□□□ -1.27
CDC13	YDL220C	ECM2	P38241	364 aa	Known RBP	7.14	□□□□□ -1.27
CDC13	YDL220C	PTC2	P39966	464 aa	Known RBP	7.14	□□□□□ -1.27
CDC13	YDL220C	HPM1	P40481	377 aa		7.14	□□□□□ -1.27
CDC13	YDL220C	RSM26	P47141	266 aa		7.14	□□□□□ -1.27
CDC13	YDL220C	MNT2	P53059	558 aa		7.14	□□□□□ -1.27
CDC13	YDL220C	HXT15	P54854	567 aa		7.14	□□□□□ -1.27
CDC13	YDL220C	YML131W	Q03102	365 aa		7.14	□□□□□ -1.27
CDC13	YDL220C	BCP1	Q06338	283 aa		7.14	□□□□□ -1.27
CDC13	YDL220C	LDB17	Q12342	491 aa		7.14	□□□□□ -1.27
CDC13	YDL220C	SAR1	P20606	190 aa	Known RBP	7.14	□□□□□ -1.27
CDC13	YDL220C	RIT1	P23796	513 aa		7.14	□□□□□ -1.27
CDC13	YDL220C	SEC1	P30619	724 aa	Known RBP	7.14	□□□□□ -1.27
CDC13	YDL220C	VMA6	P32366	345 aa	Known RBP	7.14	□□□□□ -1.27
CDC13	YDL220C	CCL1	P37366	393 aa		7.14	□□□□□ -1.27

Retrieved 100 of 5,963 RNA–protein pairs in 56.8 ms