RNA–Protein interactions for RNA: YDL084W

SUB2, Transcript of Component of the TREX complex required for nuclear mRNA export, yeast

Gene SUB2, Length 1,341 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUB2	YDL084W	TUB1	P09733	447 aa	Known RBP	5.88	□□□□□ -1.47
SUB2	YDL084W	SRS2	P12954	1174 aa		5.88	□□□□□ -1.47
SUB2	YDL084W	PHO81	P17442	1178 aa		5.88	□□□□□ -1.47
SUB2	YDL084W	COX11	P19516	300 aa	Known RBP	5.88	□□□□□ -1.47
SUB2	YDL084W	DBP5	P20449	482 aa	Known RBP	5.88	□□□□□ -1.47
SUB2	YDL084W	KGD1	P20967	1014 aa	Known RBP	5.88	□□□□□ -1.47
SUB2	YDL084W	BAS1	P22035	811 aa		5.88	□□□□□ -1.47
SUB2	YDL084W	SEC1	P30619	724 aa	Known RBP	5.88	□□□□□ -1.47
SUB2	YDL084W	ATP11	P32453	318 aa		5.88	□□□□□ -1.47
SUB2	YDL084W	HXT1	P32465	570 aa		5.88	□□□□□ -1.47
SUB2	YDL084W	BEM3	P32873	1128 aa		5.88	□□□□□ -1.47
SUB2	YDL084W	ADE17	P38009	592 aa	Known RBP	5.88	□□□□□ -1.47
SUB2	YDL084W	MCM7	P38132	845 aa		5.88	□□□□□ -1.47
SUB2	YDL084W	TDP1	P38319	544 aa		5.88	□□□□□ -1.47
SUB2	YDL084W	RFC3	P38629	340 aa		5.88	□□□□□ -1.47
SUB2	YDL084W	EGD2	P38879	174 aa	Known RBP	5.88	□□□□□ -1.47
SUB2	YDL084W	GPP2	P40106	250 aa	Known RBP	5.88	□□□□□ -1.47
SUB2	YDL084W	SOK1	P40317	901 aa		5.88	□□□□□ -1.47
SUB2	YDL084W	HPM1	P40481	377 aa		5.88	□□□□□ -1.47
SUB2	YDL084W	YIL089W	P40500	205 aa		5.88	□□□□□ -1.47
SUB2	YDL084W	YIL001W	P40560	513 aa		5.88	□□□□□ -1.47
SUB2	YDL084W	LYS14	P40971	790 aa		5.88	□□□□□ -1.47
SUB2	YDL084W	ELP2	P42935	788 aa		5.88	□□□□□ -1.47
SUB2	YDL084W	NET1	P47035	1189 aa		5.88	□□□□□ -1.47
SUB2	YDL084W	NOP9	P47077	666 aa	Known RBP	5.88	□□□□□ -1.47
SUB2	YDL084W	YGR042W	P53227	271 aa		5.88	□□□□□ -1.47
SUB2	YDL084W	PBP1	P53297	722 aa	Known RBP	5.88	□□□□□ -1.47
SUB2	YDL084W	YAP1802	P53309	568 aa		5.88	□□□□□ -1.47
SUB2	YDL084W	SOL4	P53315	255 aa		5.88	□□□□□ -1.47
SUB2	YDL084W	PRO2	P54885	456 aa	Known RBP	5.88	□□□□□ -1.47
SUB2	YDL084W	RSN1	Q03516	953 aa		5.88	□□□□□ -1.47
SUB2	YDL084W	FAR8	Q05040	523 aa		5.88	□□□□□ -1.47
SUB2	YDL084W	YPR091C	Q06833	770 aa		5.88	□□□□□ -1.47
SUB2	YDL084W	AKR2	Q12013	749 aa		5.88	□□□□□ -1.47
SUB2	YDL084W	SKS1	Q12505	502 aa		5.88	□□□□□ -1.47
SUB2	YDL084W	APM4	Q99186	491 aa		5.88	□□□□□ -1.47
SUB2	YDL084W	MTR10	Q99189	972 aa		5.88	□□□□□ -1.47
SUB2	YDL084W	MDS3	P53094	1487 aa		5.87	□□□□□ -1.47
SUB2	YDL084W	SNT2	P53127	1403 aa		5.87	□□□□□ -1.47
SUB2	YDL084W	YLR419W	Q06698	1435 aa	Known RBP	5.87	□□□□□ -1.47
SUB2	YDL084W	IPP1	P00817	287 aa	Known RBP	5.87	□□□□□ -1.47
SUB2	YDL084W	GPA1	P08539	472 aa		5.87	□□□□□ -1.47
SUB2	YDL084W	HSF1	P10961	833 aa		5.87	□□□□□ -1.47
SUB2	YDL084W	TCP1	P12612	559 aa	Known RBP	5.87	□□□□□ -1.47
SUB2	YDL084W	PRE8	P23639	250 aa		5.87	□□□□□ -1.47
SUB2	YDL084W	VMA16	P23968	213 aa		5.87	□□□□□ -1.47
SUB2	YDL084W	GIT1	P25346	518 aa		5.87	□□□□□ -1.47
SUB2	YDL084W	RAD24	P32641	659 aa		5.87	□□□□□ -1.47
SUB2	YDL084W	CTF13	P35203	478 aa		5.87	□□□□□ -1.47
SUB2	YDL084W	KTR4	P38131	464 aa		5.87	□□□□□ -1.47
SUB2	YDL084W	NTC20	P38302	140 aa	Predicted RBP	5.87	□□□□□ -1.47
SUB2	YDL084W	YHL017W	P38745	532 aa		5.87	□□□□□ -1.47
SUB2	YDL084W	TDA3	P38758	523 aa		5.87	□□□□□ -1.47
SUB2	YDL084W	PIK1	P39104	1066 aa		5.87	□□□□□ -1.47
SUB2	YDL084W	RSP5	P39940	809 aa	Known RBP	5.87	□□□□□ -1.47
SUB2	YDL084W	UBP7	P40453	1071 aa		5.87	□□□□□ -1.47
SUB2	YDL084W	MSS2	P40990	351 aa		5.87	□□□□□ -1.47
SUB2	YDL084W	RRN7	P40992	514 aa		5.87	□□□□□ -1.47
SUB2	YDL084W	YFL034W	P43564	1073 aa		5.87	□□□□□ -1.47
SUB2	YDL084W	MNN11	P46985	422 aa	Known RBP	5.87	□□□□□ -1.47
SUB2	YDL084W	MPS3	P47069	682 aa		5.87	□□□□□ -1.47
SUB2	YDL084W	CCC1	P47818	322 aa		5.87	□□□□□ -1.47
SUB2	YDL084W	GTO1	P48239	356 aa		5.87	□□□□□ -1.47
SUB2	YDL084W	MAL11	P53048	616 aa		5.87	□□□□□ -1.47
SUB2	YDL084W	CWC25	P53854	179 aa	Known RBP	5.87	□□□□□ -1.47
SUB2	YDL084W	SNP1	Q00916	300 aa	Predicted RBP	5.87	□□□□□ -1.47
SUB2	YDL084W	MAK10	Q02197	733 aa		5.87	□□□□□ -1.47
SUB2	YDL084W	TBF1	Q02457	562 aa		5.87	□□□□□ -1.47
SUB2	YDL084W	SMA1	Q02651	245 aa		5.87	□□□□□ -1.47
SUB2	YDL084W	FCP1	Q03254	732 aa		5.87	□□□□□ -1.47
SUB2	YDL084W	RAD30	Q04049	632 aa		5.87	□□□□□ -1.47
SUB2	YDL084W	PDS5	Q04264	1277 aa		5.87	□□□□□ -1.47
SUB2	YDL084W	SEG1	Q04279	960 aa		5.87	□□□□□ -1.47
SUB2	YDL084W	BCH1	Q05029	724 aa		5.87	□□□□□ -1.47
SUB2	YDL084W	UTP21	Q06078	939 aa	Predicted RBP	5.87	□□□□□ -1.47
SUB2	YDL084W	NUT2	Q06213	157 aa		5.87	□□□□□ -1.47
SUB2	YDL084W	THI73	Q07904	523 aa		5.87	□□□□□ -1.47
SUB2	YDL084W	ESA1	Q08649	445 aa		5.87	□□□□□ -1.47
SUB2	YDL084W	FLC1	Q08967	793 aa		5.87	□□□□□ -1.47
SUB2	YDL084W	PSF3	Q12146	194 aa		5.87	□□□□□ -1.47
SUB2	YDL084W	ENO1	P00924	437 aa	Known RBP	5.86	□□□□□ -1.47
SUB2	YDL084W	RAD7	P06779	565 aa		5.86	□□□□□ -1.47
SUB2	YDL084W	ERR1	P0CX10	437 aa		5.86	□□□□□ -1.47
SUB2	YDL084W	ERR2	P0CX11	437 aa		5.86	□□□□□ -1.47
SUB2	YDL084W	SPE2	P21182	396 aa		5.86	□□□□□ -1.47
SUB2	YDL084W	RRP7	P25368	297 aa	Predicted RBP	5.86	□□□□□ -1.47
SUB2	YDL084W	GEX1	P25596	615 aa		5.86	□□□□□ -1.47
SUB2	YDL084W	COT1	P32798	439 aa		5.86	□□□□□ -1.47
SUB2	YDL084W	VAM7	P32912	316 aa		5.86	□□□□□ -1.47
SUB2	YDL084W	MAE1	P36013	669 aa	Known RBP	5.86	□□□□□ -1.47
SUB2	YDL084W	SIF2	P38262	535 aa		5.86	□□□□□ -1.47
SUB2	YDL084W	RGD1	P38339	666 aa		5.86	□□□□□ -1.47
SUB2	YDL084W	SDH8	P38345	138 aa		5.86	□□□□□ -1.47
SUB2	YDL084W	SEN34	P39707	275 aa		5.86	□□□□□ -1.47
SUB2	YDL084W	SPF1	P39986	1215 aa	Known RBP	5.86	□□□□□ -1.47
SUB2	YDL084W	ICE2	P40499	491 aa		5.86	□□□□□ -1.47
SUB2	YDL084W	HIS6	P40545	261 aa		5.86	□□□□□ -1.47
SUB2	YDL084W	NAS2	P40555	220 aa		5.86	□□□□□ -1.47
SUB2	YDL084W	HXT8	P40886	569 aa		5.86	□□□□□ -1.47
SUB2	YDL084W	QRI1	P43123	477 aa	Known RBP	5.86	□□□□□ -1.47

Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms