RNA–Protein interactions for RNA: YBR148W

YSW1, Transcript of Protein required for normal prospore membrane formation, yeast

Gene YSW1, Length 1,830 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YSW1	YBR148W	YHL041W	P38730	149 aa		2.68	□□□□□ -1.98
YSW1	YBR148W	FLO5	P38894	1075 aa		2.68	□□□□□ -1.98
YSW1	YBR148W	YPL068C	Q02749	293 aa		2.68	□□□□□ -1.98
YSW1	YBR148W	ORM2	Q06144	216 aa		2.68	□□□□□ -1.98
YSW1	YBR148W	ARP2	P32381	391 aa	Known RBP	2.68	□□□□□ -1.98
YSW1	YBR148W	TAF5	P38129	798 aa		2.68	□□□□□ -1.98
YSW1	YBR148W	CIR1	P42940	261 aa		2.68	□□□□□ -1.98
YSW1	YBR148W	ERG13	P54839	491 aa	Known RBP	2.68	□□□□□ -1.98
YSW1	YBR148W	IRC3	Q06683	689 aa		2.68	□□□□□ -1.98
YSW1	YBR148W	HER1	Q12276	1246 aa		2.68	□□□□□ -1.98
YSW1	YBR148W	YBR255C-A	Q3E776	120 aa		2.68	□□□□□ -1.98
YSW1	YBR148W	PCT1	P13259	424 aa		2.67	□□□□□ -1.98
YSW1	YBR148W	NCP1	P16603	691 aa	Known RBP	2.67	□□□□□ -1.98
YSW1	YBR148W	PTC6	P25646	442 aa		2.67	□□□□□ -1.98
YSW1	YBR148W	GRX7	P38068	203 aa		2.67	□□□□□ -1.98
YSW1	YBR148W	PUG1	P40100	303 aa		2.67	□□□□□ -1.98
YSW1	YBR148W	RAD26	P40352	1085 aa		2.67	□□□□□ -1.98
YSW1	YBR148W	YGR079W	P53249	370 aa		2.67	□□□□□ -1.98
YSW1	YBR148W	CPR6	P53691	371 aa	Known RBP	2.67	□□□□□ -1.98
YSW1	YBR148W	MLC2	Q06580	163 aa		2.67	□□□□□ -1.98
YSW1	YBR148W	IWR1	Q07532	353 aa	Predicted RBP	2.67	□□□□□ -1.98
YSW1	YBR148W	BI2	P03873	423 aa		2.66	□□□□□ -1.98
YSW1	YBR148W	COQ3	P27680	312 aa		2.66	□□□□□ -1.98
YSW1	YBR148W	PTP2	P29461	750 aa		2.66	□□□□□ -1.98
YSW1	YBR148W	VPS41	P38959	992 aa		2.66	□□□□□ -1.98
YSW1	YBR148W	CFD1	P40558	293 aa		2.66	□□□□□ -1.98
YSW1	YBR148W	NOP2	P40991	618 aa	Known RBP	2.66	□□□□□ -1.98
YSW1	YBR148W	MPS1	P54199	764 aa		2.66	□□□□□ -1.98
YSW1	YBR148W	YPL191C	Q08930	360 aa		2.66	□□□□□ -1.98
YSW1	YBR148W	YML003W	P0CF16	290 aa		2.65	□□□□□ -1.98
YSW1	YBR148W	BIK1	P11709	440 aa		2.65	□□□□□ -1.98
YSW1	YBR148W	HES1	P35843	434 aa		2.65	□□□□□ -1.98
YSW1	YBR148W	YKL133C	P36066	463 aa		2.65	□□□□□ -1.98
YSW1	YBR148W	EXO84	P38261	753 aa		2.65	□□□□□ -1.98
YSW1	YBR148W	GND1	P38720	489 aa	Known RBP	2.65	□□□□□ -1.98
YSW1	YBR148W	CAB2	P40506	365 aa		2.65	□□□□□ -1.98
YSW1	YBR148W	YJL107C	P42947	387 aa		2.65	□□□□□ -1.98
YSW1	YBR148W	YOL057W	Q08225	711 aa		2.65	□□□□□ -1.98
YSW1	YBR148W	YOR389W	Q08912	624 aa		2.65	□□□□□ -1.98
YSW1	YBR148W	GET3	Q12154	354 aa	Known RBP	2.65	□□□□□ -1.98
YSW1	YBR148W	PCD1	Q12524	340 aa		2.65	□□□□□ -1.98
YSW1	YBR148W	YER145C-A	A0A023PYF4	145 aa		2.65	□□□□□ -1.99
YSW1	YBR148W	RFA2	P26754	273 aa	Known RBP	2.65	□□□□□ -1.99
YSW1	YBR148W	LNP1	P38878	278 aa		2.65	□□□□□ -1.99
YSW1	YBR148W	MSY1	P48527	492 aa		2.65	□□□□□ -1.99
YSW1	YBR148W	IMA1	P53051	589 aa		2.65	□□□□□ -1.99
YSW1	YBR148W	EAF7	P53911	425 aa	Known RBP	2.65	□□□□□ -1.99
YSW1	YBR148W	TDA9	Q04545	1251 aa		2.65	□□□□□ -1.99
YSW1	YBR148W	LEA1	Q08963	238 aa	Predicted RBP	2.65	□□□□□ -1.99
YSW1	YBR148W	YPR089W	O13585	888 aa		2.64	□□□□□ -1.99
YSW1	YBR148W	AIM17	P23180	465 aa	Known RBP	2.64	□□□□□ -1.99
YSW1	YBR148W	LAC1	P28496	418 aa		2.64	□□□□□ -1.99
YSW1	YBR148W	ASK1	P35734	292 aa		2.64	□□□□□ -1.99
YSW1	YBR148W	RPF2	P36160	344 aa	Known RBP	2.64	□□□□□ -1.99
YSW1	YBR148W	MNT3	P40549	630 aa		2.64	□□□□□ -1.99
YSW1	YBR148W	LYS20	P48570	428 aa	Known RBP	2.64	□□□□□ -1.99
YSW1	YBR148W	SCW4	P53334	386 aa	Known RBP	2.64	□□□□□ -1.99
YSW1	YBR148W	ATP4	P05626	244 aa		2.63	□□□□□ -1.99
YSW1	YBR148W	PDE1	P22434	369 aa		2.63	□□□□□ -1.99
YSW1	YBR148W	ERR3	P42222	437 aa		2.63	□□□□□ -1.99
YSW1	YBR148W	IRC8	P47046	822 aa		2.63	□□□□□ -1.99
YSW1	YBR148W	ARC35	P53731	342 aa	Known RBP	2.63	□□□□□ -1.99
YSW1	YBR148W	GTB1	Q04924	702 aa		2.63	□□□□□ -1.99
YSW1	YBR148W	TFC6	Q06339	672 aa		2.63	□□□□□ -1.99
YSW1	YBR148W	RRP6	Q12149	733 aa	Known RBP	2.63	□□□□□ -1.99
YSW1	YBR148W	CNA1	P23287	553 aa		2.63	□□□□□ -1.99
YSW1	YBR148W	MSH1	P25846	959 aa		2.63	□□□□□ -1.99
YSW1	YBR148W	SIP1	P32578	815 aa		2.63	□□□□□ -1.99
YSW1	YBR148W	RPT3	P33298	428 aa	Known RBP	2.63	□□□□□ -1.99
YSW1	YBR148W	JHD1	P40034	492 aa		2.63	□□□□□ -1.99
YSW1	YBR148W	ATG36	P46983	293 aa		2.63	□□□□□ -1.99
YSW1	YBR148W	ADE16	P54113	591 aa	Known RBP	2.63	□□□□□ -1.99
YSW1	YBR148W	SEC5	P89102	971 aa		2.63	□□□□□ -1.99
YSW1	YBR148W	RVB2	Q12464	471 aa	Known RBP	2.63	□□□□□ -1.99
YSW1	YBR148W	CHO1	P08456	276 aa		2.62	□□□□□ -1.99
YSW1	YBR148W	PET122	P10355	254 aa		2.62	□□□□□ -1.99
YSW1	YBR148W	ARN1	P38731	627 aa		2.62	□□□□□ -1.99
YSW1	YBR148W	PCI8	P40512	444 aa		2.62	□□□□□ -1.99
YSW1	YBR148W	RRT6	P53117	311 aa	Predicted RBP	2.62	□□□□□ -1.99
YSW1	YBR148W	YPL108W	Q02872	168 aa	Predicted RBP	2.62	□□□□□ -1.99
YSW1	YBR148W	YDR109C	Q04585	715 aa		2.62	□□□□□ -1.99
YSW1	YBR148W	FRE3	Q08905	711 aa		2.62	□□□□□ -1.99
YSW1	YBR148W	RRI1	Q12468	440 aa		2.62	□□□□□ -1.99
YSW1	YBR148W	ILV2	P07342	687 aa	Known RBP	2.61	□□□□□ -1.99
YSW1	YBR148W	ILS1	P09436	1072 aa	Known RBP	2.61	□□□□□ -1.99
YSW1	YBR148W	RPL42A	P0CX27	106 aa	Known RBP	2.61	□□□□□ -1.99
YSW1	YBR148W	RPL42B	P0CX28	106 aa	Known RBP	2.61	□□□□□ -1.99
YSW1	YBR148W	SRP54	P20424	541 aa	Known RBP	2.61	□□□□□ -1.99
YSW1	YBR148W	CLB4	P24871	460 aa		2.61	□□□□□ -1.99
YSW1	YBR148W	PXL1	P36166	706 aa		2.61	□□□□□ -1.99
YSW1	YBR148W	YMR124W	P39523	943 aa	Known RBP	2.61	□□□□□ -1.99
YSW1	YBR148W	ACA1	P39970	489 aa		2.61	□□□□□ -1.99
YSW1	YBR148W	YIL152W	P40455	235 aa		2.61	□□□□□ -1.99
YSW1	YBR148W	ORC5	P50874	479 aa		2.61	□□□□□ -1.99
YSW1	YBR148W	YNR061C	P53747	219 aa		2.61	□□□□□ -1.99
YSW1	YBR148W	ATG21	Q02887	496 aa		2.61	□□□□□ -1.99
YSW1	YBR148W	PIG1	Q06216	648 aa		2.61	□□□□□ -1.99
YSW1	YBR148W	VAM6	Q07468	1049 aa		2.61	□□□□□ -1.99
YSW1	YBR148W	THI3	Q07471	609 aa		2.61	□□□□□ -1.99
YSW1	YBR148W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	2.61	□□□□□ -1.99	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 8.1 ms