RNA–Protein interactions for RNA: YAL040C

CLN3, Transcript of G1 cyclin involved in cell cycle progression, yeastyeast

Gene CLN3, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CLN3YAL040C REG2P38232 338 aa2.44□□□□□ -2.02
CLN3YAL040C PCM1P38628 557 aaKnown RBP2.44□□□□□ -2.02
CLN3YAL040C PES4P39684 611 aa2.44□□□□□ -2.02
CLN3YAL040C YER158CP40095 573 aa2.44□□□□□ -2.02
CLN3YAL040C SHQ1P40486 507 aaPredicted RBP2.44□□□□□ -2.02
CLN3YAL040C HIS6P40545 261 aa2.44□□□□□ -2.02
CLN3YAL040C TFG2P41896 400 aaPredicted RBP2.44□□□□□ -2.02
CLN3YAL040C CAF16P43569 289 aa2.44□□□□□ -2.02
CLN3YAL040C MNN11P46985 422 aaKnown RBP2.44□□□□□ -2.02
CLN3YAL040C IML2P47031 731 aa2.44□□□□□ -2.02
CLN3YAL040C BNA1P47096 177 aa2.44□□□□□ -2.02
CLN3YAL040C RPS7BP48164 190 aaKnown RBP2.44□□□□□ -2.02
CLN3YAL040C CCM1P48237 864 aaPredicted RBP2.44□□□□□ -2.02
CLN3YAL040C NPY1P53164 384 aa2.44□□□□□ -2.02
CLN3YAL040C CAF130P53280 1122 aaPredicted RBP2.44□□□□□ -2.02
CLN3YAL040C SLD5Q03406 294 aa2.44□□□□□ -2.02
CLN3YAL040C YLR287CQ05881 355 aa2.44□□□□□ -2.02
CLN3YAL040C YLR352WQ06479 807 aa2.44□□□□□ -2.02
CLN3YAL040C OMS1Q06668 471 aa2.44□□□□□ -2.02
CLN3YAL040C YLR040CQ07988 224 aa2.44□□□□□ -2.02
CLN3YAL040C YOL073CQ08232 322 aa2.44□□□□□ -2.02
CLN3YAL040C YDR056CQ12025 205 aa2.44□□□□□ -2.02
CLN3YAL040C ATG9Q12142 997 aa2.44□□□□□ -2.02
CLN3YAL040C RMP1Q12530 201 aa2.44□□□□□ -2.02
CLN3YAL040C MTF2P10849 440 aa2.43□□□□□ -2.02
CLN3YAL040C RAD57P25301 460 aa2.43□□□□□ -2.02
CLN3YAL040C ERG4P25340 473 aa2.43□□□□□ -2.02
CLN3YAL040C SED4P25365 1065 aa2.43□□□□□ -2.02
CLN3YAL040C RPC53P25441 422 aa2.43□□□□□ -2.02
CLN3YAL040C CDC48P25694 835 aaKnown RBP2.43□□□□□ -2.02
CLN3YAL040C HEM12P32347 362 aaPredicted RBP2.43□□□□□ -2.02
CLN3YAL040C PEX5P35056 612 aa2.43□□□□□ -2.02
CLN3YAL040C NUP120P35729 1037 aa2.43□□□□□ -2.02
CLN3YAL040C BIT2P38346 545 aa2.43□□□□□ -2.02
CLN3YAL040C NPP2P39997 493 aa2.43□□□□□ -2.02
CLN3YAL040C VAB2P40003 282 aa2.43□□□□□ -2.02
CLN3YAL040C FIS1P40515 155 aa2.43□□□□□ -2.02
CLN3YAL040C LCB2P40970 561 aa2.43□□□□□ -2.02
CLN3YAL040C QRI7P43122 407 aa2.43□□□□□ -2.02
CLN3YAL040C SGM1P47166 707 aa2.43□□□□□ -2.02
CLN3YAL040C RAI1P53063 387 aaKnown RBP2.43□□□□□ -2.02
CLN3YAL040C RRT6P53117 311 aaPredicted RBP2.43□□□□□ -2.02
CLN3YAL040C TAM41P53230 385 aa2.43□□□□□ -2.02
CLN3YAL040C CNM67P53865 581 aaKnown RBP2.43□□□□□ -2.02
CLN3YAL040C SFB2P53953 876 aa2.43□□□□□ -2.02
CLN3YAL040C GTR1Q00582 310 aa2.43□□□□□ -2.02
CLN3YAL040C TIM44Q01852 431 aa2.43□□□□□ -2.02
CLN3YAL040C RCF1Q03713 159 aa2.43□□□□□ -2.02
CLN3YAL040C YDR278CQ05612 105 aa2.43□□□□□ -2.02
CLN3YAL040C GUD1Q07729 489 aa2.43□□□□□ -2.02
CLN3YAL040C PEX15Q08215 383 aa2.43□□□□□ -2.02
CLN3YAL040C MCH5Q08777 521 aa2.43□□□□□ -2.02
CLN3YAL040C CFT2Q12102 859 aaPredicted RBP2.43□□□□□ -2.02
CLN3YAL040C UPC2Q12151 913 aa2.43□□□□□ -2.02
CLN3YAL040C SCM3Q12334 223 aa2.43□□□□□ -2.02
CLN3YAL040C TRP4P07285 380 aaPredicted RBP2.42□□□□□ -2.02
CLN3YAL040C UBC1P21734 215 aaKnown RBP2.42□□□□□ -2.02
CLN3YAL040C PER1P25625 357 aa2.42□□□□□ -2.02
CLN3YAL040C CDC60P26637 1090 aaKnown RBP2.42□□□□□ -2.02
CLN3YAL040C PAP1P29468 568 aaKnown RBP2.42□□□□□ -2.02
CLN3YAL040C YBR284WP38150 797 aa2.42□□□□□ -2.02
CLN3YAL040C EFM4P40516 257 aa2.42□□□□□ -2.02
CLN3YAL040C FYV8P46949 817 aaKnown RBP2.42□□□□□ -2.02
CLN3YAL040C NET1P47035 1189 aa2.42□□□□□ -2.02
CLN3YAL040C BUL1P48524 976 aa2.42□□□□□ -2.02
CLN3YAL040C MEP3P53390 489 aa2.42□□□□□ -2.02
CLN3YAL040C NCS2P53923 493 aaPredicted RBP2.42□□□□□ -2.02
CLN3YAL040C BOP3P53958 396 aa2.42□□□□□ -2.02
CLN3YAL040C ATP25Q03153 612 aa2.42□□□□□ -2.02
CLN3YAL040C YMR018WQ04364 514 aa2.42□□□□□ -2.02
CLN3YAL040C SOV1Q04748 898 aa2.42□□□□□ -2.02
CLN3YAL040C VPS38Q05919 439 aa2.42□□□□□ -2.02
CLN3YAL040C ISA1Q07821 250 aaPredicted RBP2.42□□□□□ -2.02
CLN3YAL040C MLH2Q07980 695 aa2.42□□□□□ -2.02
CLN3YAL040C SIL1Q08199 421 aa2.42□□□□□ -2.02
CLN3YAL040C APM4Q99186 491 aa2.42□□□□□ -2.02
CLN3YAL040C HOM3P10869 527 aa2.42□□□□□ -2.02
CLN3YAL040C IME1P21190 360 aa2.42□□□□□ -2.02
CLN3YAL040C KIN82P25341 720 aa2.42□□□□□ -2.02
CLN3YAL040C RER1P25560 188 aa2.42□□□□□ -2.02
CLN3YAL040C HOG1P32485 435 aa2.42□□□□□ -2.02
CLN3YAL040C CBF2P32504 956 aa2.42□□□□□ -2.02
CLN3YAL040C PET309P32522 965 aaPredicted RBP2.42□□□□□ -2.02
CLN3YAL040C YSC83P32792 385 aa2.42□□□□□ -2.02
CLN3YAL040C NIP100P33420 868 aa2.42□□□□□ -2.02
CLN3YAL040C SET5P38890 526 aaKnown RBP2.42□□□□□ -2.02
CLN3YAL040C YMR124WP39523 943 aaKnown RBP2.42□□□□□ -2.02
CLN3YAL040C RAD26P40352 1085 aa2.42□□□□□ -2.02
CLN3YAL040C RET2P43621 546 aa2.42□□□□□ -2.02
CLN3YAL040C APT1P49435 187 aaKnown RBP2.42□□□□□ -2.02
CLN3YAL040C PRP31P49704 494 aaPredicted RBP2.42□□□□□ -2.02
CLN3YAL040C ORC5P50874 479 aa2.42□□□□□ -2.02
CLN3YAL040C SLD3P53135 668 aa2.42□□□□□ -2.02
CLN3YAL040C ZPR1P53303 486 aaKnown RBP2.42□□□□□ -2.02
CLN3YAL040C HOL1P53389 586 aa2.42□□□□□ -2.02
CLN3YAL040C ALF1P53904 254 aa2.42□□□□□ -2.02
CLN3YAL040C RNT1Q02555 471 aa2.42□□□□□ -2.02
CLN3YAL040C DIG1Q03063 452 aaKnown RBP2.42□□□□□ -2.02
CLN3YAL040C NGL3Q03210 505 aa2.42□□□□□ -2.02
CLN3YAL040C RRB1Q04225 511 aaKnown RBP2.42□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms