RNA–Protein interactions for RNA: ENSMUST00000173243.7

Ccdc28a-203, Transcript of Coiled-coil domain-containing 28A, mousemouse

TSL 5 BASIC

Gene Ccdc28a, Length 590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-203ENSMUST00000173243 Sec61bQ9CQS8 96 aaKnown RBP6.67□□□□□ -1.34
Ccdc28a-203ENSMUST00000173243 Gm37013Q8K491 104 aa6.66□□□□□ -1.34
Ccdc28a-203ENSMUST00000173243 Trav14d-3-dv8A0A075B619 120 aa6.65□□□□□ -1.34
Ccdc28a-203ENSMUST00000173243 Gm44790A0A0N4SV91 103 aa6.65□□□□□ -1.34
Ccdc28a-203ENSMUST00000173243 UqcrqQ9CQ69 82 aa6.64□□□□□ -1.35
Ccdc28a-203ENSMUST00000173243 Krtap15-1Q9QZU5 150 aa6.64□□□□□ -1.35
Ccdc28a-203ENSMUST00000173243 ZanO88799 5376 aa6.62□□□□□ -1.35
Ccdc28a-203ENSMUST00000173243 C130032M10RikQ8C888 123 aa6.62□□□□□ -1.35
Ccdc28a-203ENSMUST00000173243 A0A286YCQ8 80 aa6.61□□□□□ -1.35
Ccdc28a-203ENSMUST00000173243 Krtap1-3A2A588 173 aa6.61□□□□□ -1.35
Ccdc28a-203ENSMUST00000173243 Gm26602M0QWA4 95 aa6.61□□□□□ -1.35
Ccdc28a-203ENSMUST00000173243 Mrpl34Q99N91 92 aa6.61□□□□□ -1.35
Ccdc28a-203ENSMUST00000173243 Rpl37Q9D823 97 aa6.6□□□□□ -1.35
Ccdc28a-203ENSMUST00000173243 2310057N15RikQ9D6T8 200 aa6.57□□□□□ -1.36
Ccdc28a-203ENSMUST00000173243 Xcl1P47993 114 aa6.54□□□□□ -1.36
Ccdc28a-203ENSMUST00000173243 Defa21Q8C1P2 93 aa6.54□□□□□ -1.36
Ccdc28a-203ENSMUST00000173243 Igkv3-3A0A140T8Q0 119 aa6.53□□□□□ -1.36
Ccdc28a-203ENSMUST00000173243 Ormdl1Q921I0 153 aa6.53□□□□□ -1.36
Ccdc28a-203ENSMUST00000173243 Fat4Q2PZL6 4981 aa6.52□□□□□ -1.37
Ccdc28a-203ENSMUST00000173243 Reg3aO09037 175 aa6.5□□□□□ -1.37
Ccdc28a-203ENSMUST00000173243 Gm26920S4R2A5 56 aa6.5□□□□□ -1.37
Ccdc28a-203ENSMUST00000173243 Mtatp8P03930 67 aa6.49□□□□□ -1.37
Ccdc28a-203ENSMUST00000173243 BikO70337 150 aa6.48□□□□□ -1.37
Ccdc28a-203ENSMUST00000173243 2310034C09RikQ9D746 214 aa6.48□□□□□ -1.37
Ccdc28a-203ENSMUST00000173243 Scgb1b2O35176 93 aa6.47□□□□□ -1.37
Ccdc28a-203ENSMUST00000173243 Rnf213E9Q555 5152 aaKnown RBP6.46□□□□□ -1.38
Ccdc28a-203ENSMUST00000173243 Igkv8-19A0A0G2JFN8 121 aa6.45□□□□□ -1.38
Ccdc28a-203ENSMUST00000173243 7530416G11RikJ3QJX6 159 aa6.43□□□□□ -1.38
Ccdc28a-203ENSMUST00000173243 Crct1Q6PAI5 102 aa6.42□□□□□ -1.38
Ccdc28a-203ENSMUST00000173243 Lyrm7Q9DA03 104 aa6.42□□□□□ -1.38
Ccdc28a-203ENSMUST00000173243 Defb13Q8R2I4 64 aa6.41□□□□□ -1.38
Ccdc28a-203ENSMUST00000173243 Ubl5Q9EPV8 73 aa6.4□□□□□ -1.38
Ccdc28a-203ENSMUST00000173243 LorP18165 486 aa6.39□□□□□ -1.39
Ccdc28a-203ENSMUST00000173243 Rnase13Q5GAM7 153 aa6.39□□□□□ -1.39
Ccdc28a-203ENSMUST00000173243 Krtap16-3Q8C1I6 86 aa6.37□□□□□ -1.39
Ccdc28a-203ENSMUST00000173243 Gm10267M0QWD8 85 aa6.36□□□□□ -1.39
Ccdc28a-203ENSMUST00000173243 Apoc4Q61268 124 aa6.36□□□□□ -1.39
Ccdc28a-203ENSMUST00000173243 Krtap19-1Q925H2 87 aa6.36□□□□□ -1.39
Ccdc28a-203ENSMUST00000173243 Krtap19-3Q925H6 87 aa6.36□□□□□ -1.39
Ccdc28a-203ENSMUST00000173243 MplkipQ9D011 178 aa6.35□□□□□ -1.39
Ccdc28a-203ENSMUST00000173243 Krtap3-2Q9D638 99 aa6.35□□□□□ -1.39
Ccdc28a-203ENSMUST00000173243 Krtap3-3Q9D7P0 99 aa6.35□□□□□ -1.39
Ccdc28a-203ENSMUST00000173243 SvipQ3UZP4 77 aa6.33□□□□□ -1.4
Ccdc28a-203ENSMUST00000173243 1700042G07RikB1AUF7 90 aa6.32□□□□□ -1.4
Ccdc28a-203ENSMUST00000173243 Trav3-1Q5R1I8 114 aa6.32□□□□□ -1.4
Ccdc28a-203ENSMUST00000173243 Fam229aB2KGE5 128 aa6.3□□□□□ -1.4
Ccdc28a-203ENSMUST00000173243 Krtap1-4Q3V2D6 188 aa6.29□□□□□ -1.4
Ccdc28a-203ENSMUST00000173243 Gm17416Q30KP4 66 aa6.28□□□□□ -1.4
Ccdc28a-203ENSMUST00000173243 Gm28539A0A087WSL9 92 aa6.27□□□□□ -1.41
Ccdc28a-203ENSMUST00000173243 Pcp4l1Q6W8Q3 68 aa6.27□□□□□ -1.41
Ccdc28a-203ENSMUST00000173243 Gm19402J3QJV4 266 aa6.25□□□□□ -1.41
Ccdc28a-203ENSMUST00000173243 Gm10061D3Z714 54 aa6.24□□□□□ -1.41
Ccdc28a-203ENSMUST00000173243 Tmem254aP0DN89 123 aa6.22□□□□□ -1.41
Ccdc28a-203ENSMUST00000173243 Tmem254bP0DN90 123 aa6.22□□□□□ -1.41
Ccdc28a-203ENSMUST00000173243 Tmem254cP0DN91 123 aa6.22□□□□□ -1.41
Ccdc28a-203ENSMUST00000173243 Prr15lQ8JZM2 100 aa6.21□□□□□ -1.42
Ccdc28a-203ENSMUST00000173243 A0A286YE49 62 aa6.2□□□□□ -1.42
Ccdc28a-203ENSMUST00000173243 Gm4491E0CX42 125 aa6.19□□□□□ -1.42
Ccdc28a-203ENSMUST00000173243 Chtf8P0CG14 533 aa6.17□□□□□ -1.42
Ccdc28a-203ENSMUST00000173243 SspoQ8CG65 4998 aa6.16□□□□□ -1.42
Ccdc28a-203ENSMUST00000173243 Gm10318A0A1W2P728 225 aa6.16□□□□□ -1.42
Ccdc28a-203ENSMUST00000173243 Naa38Q9D2U5 125 aa6.16□□□□□ -1.42
Ccdc28a-203ENSMUST00000173243 Gtf2h5Q8K2X8 71 aa6.15□□□□□ -1.42
Ccdc28a-203ENSMUST00000173243 Samd13D3YUG0 102 aa6.14□□□□□ -1.43
Ccdc28a-203ENSMUST00000173243 9230102O04RikA2ASX7 82 aa6.13□□□□□ -1.43
Ccdc28a-203ENSMUST00000173243 Gm11562A0PK51 136 aa6.12□□□□□ -1.43
Ccdc28a-203ENSMUST00000173243 Pxt1Q8K459 51 aa6.1□□□□□ -1.43
Ccdc28a-203ENSMUST00000173243 Hist1h4aP62806 103 aaKnown RBP6.08□□□□□ -1.44
Ccdc28a-203ENSMUST00000173243 Spink8Q09TK9 105 aa6.07□□□□□ -1.44
Ccdc28a-203ENSMUST00000173243 Gm11569B1AQB1 180 aa6.06□□□□□ -1.44
Ccdc28a-203ENSMUST00000173243 Fam229bQ8CF36 80 aa6.06□□□□□ -1.44
Ccdc28a-203ENSMUST00000173243 Krtap13-1Q8K198 168 aa6.06□□□□□ -1.44
Ccdc28a-203ENSMUST00000173243 2210017I01RikA0A0A6YVV1 95 aa6.03□□□□□ -1.44
Ccdc28a-203ENSMUST00000173243 1700074P13RikQ9D9G7 251 aa6.03□□□□□ -1.44
Ccdc28a-203ENSMUST00000173243 Q8BGJ3 129 aa6.02□□□□□ -1.45
Ccdc28a-203ENSMUST00000173243 Krtap1-5A2A590 122 aa6.01□□□□□ -1.45
Ccdc28a-203ENSMUST00000173243 Gm10999F6Q4M4 69 aa5.98□□□□□ -1.45
Ccdc28a-203ENSMUST00000173243 Krtap17-1A2A5X6 109 aa5.97□□□□□ -1.45
Ccdc28a-203ENSMUST00000173243 Ndufc1Q9CQY9 76 aa5.97□□□□□ -1.45
Ccdc28a-203ENSMUST00000173243 4930507D05RikQ8C9C9 103 aa5.93□□□□□ -1.46
Ccdc28a-203ENSMUST00000173243 Krtap4-2B1AQ85 167 aa5.91□□□□□ -1.46
Ccdc28a-203ENSMUST00000173243 2310079G19RikQ9D6L6 185 aa5.9□□□□□ -1.46
Ccdc28a-203ENSMUST00000173243 Fam240bJ3QMB3 78 aa5.89□□□□□ -1.47
Ccdc28a-203ENSMUST00000173243 Lce1gQ9D195 139 aa5.84□□□□□ -1.47
Ccdc28a-203ENSMUST00000173243 Defb38Q7TNV7 63 aa5.83□□□□□ -1.48
Ccdc28a-203ENSMUST00000173243 Gm21798J3QNU5 87 aa5.82□□□□□ -1.48
Ccdc28a-203ENSMUST00000173243 Spint4Q9D263 159 aa5.82□□□□□ -1.48
Ccdc28a-203ENSMUST00000173243 B930094E09RikQ8C4T2 136 aa5.81□□□□□ -1.48
Ccdc28a-203ENSMUST00000173243 Atox1O08997 68 aaKnown RBP5.8□□□□□ -1.48
Ccdc28a-203ENSMUST00000173243 Bud31Q6PGH1 103 aa5.78□□□□□ -1.48
Ccdc28a-203ENSMUST00000173243 Krtap3-1A2A591 98 aa5.77□□□□□ -1.49
Ccdc28a-203ENSMUST00000173243 Gm10160F6Y577 67 aa5.77□□□□□ -1.49
Ccdc28a-203ENSMUST00000173243 Atp5eP56382 52 aa5.77□□□□□ -1.49
Ccdc28a-203ENSMUST00000173243 Gm45213A0A0U1RNZ6 101 aa5.76□□□□□ -1.49
Ccdc28a-203ENSMUST00000173243 Gm11555B1AQ89 175 aa5.75□□□□□ -1.49
Ccdc28a-203ENSMUST00000173243 Gm10643Q3URG9 111 aa5.74□□□□□ -1.49
Ccdc28a-203ENSMUST00000173243 Gm19426M0QWC7 77 aa5.73□□□□□ -1.49
Ccdc28a-203ENSMUST00000173243 BatfO35284 125 aa5.73□□□□□ -1.49
Ccdc28a-203ENSMUST00000173243 Pcp4P63054 62 aa5.73□□□□□ -1.49
Ccdc28a-203ENSMUST00000173243 4930518I15RikQ3V2W7 57 aa5.73□□□□□ -1.49
Retrieved 100 of 22,080 RNA–protein pairs in 65.5 ms