Protein–RNA interactions for Protein: Q8CG65

Sspo, SCO-spondin, mousemouse

Predictions only

Length 4,998 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspoQ8CG65 Gm25239-201ENSMUST00000174915 86 ntBASIC19,64■□□□□ 0,73
SspoQ8CG65 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC18,2■□□□□ 0,5
SspoQ8CG65 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC17,85■□□□□ 0,45
SspoQ8CG65 Gm24109-201ENSMUST00000175489 103 ntBASIC17,25■□□□□ 0,35
SspoQ8CG65 Gm15042-201ENSMUST00000120212 883 ntBASIC16,75■□□□□ 0,27
SspoQ8CG65 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC16,59■□□□□ 0,25
SspoQ8CG65 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16,57■□□□□ 0,24
SspoQ8CG65 Gm15045-201ENSMUST00000117359 883 ntBASIC16,38■□□□□ 0,21
SspoQ8CG65 Gm23366-201ENSMUST00000175022 89 ntBASIC16,23■□□□□ 0,19
SspoQ8CG65 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC16,23■□□□□ 0,19
SspoQ8CG65 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC16,2■□□□□ 0,18
SspoQ8CG65 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC16,14■□□□□ 0,17
SspoQ8CG65 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC16,09■□□□□ 0,17
SspoQ8CG65 AC153911.1-202ENSMUST00000218534 1034 ntBASIC16,06■□□□□ 0,16
SspoQ8CG65 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC15,97■□□□□ 0,15
SspoQ8CG65 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC15,96■□□□□ 0,14
SspoQ8CG65 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC15,68■□□□□ 0,1
SspoQ8CG65 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC15,61■□□□□ 0,09
SspoQ8CG65 Gm25238-201ENSMUST00000174914 89 ntBASIC15,61■□□□□ 0,09
SspoQ8CG65 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC15,54■□□□□ 0,08
SspoQ8CG65 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC15,5■□□□□ 0,07
SspoQ8CG65 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC15,48■□□□□ 0,07
SspoQ8CG65 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC15,3■□□□□ 0,04
SspoQ8CG65 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC15,2■□□□□ 0,02
SspoQ8CG65 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC15,19■□□□□ 0,02
SspoQ8CG65 Gm25262-201ENSMUST00000174934 133 ntBASIC15,08■□□□□ 0
SspoQ8CG65 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC15,02□□□□□ -0,01
SspoQ8CG65 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC14,97□□□□□ -0,01
SspoQ8CG65 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC14,94□□□□□ -0,02
SspoQ8CG65 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC14,91□□□□□ -0,02
SspoQ8CG65 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC14,91□□□□□ -0,02
SspoQ8CG65 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC14,85□□□□□ -0,03
SspoQ8CG65 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC14,84□□□□□ -0,03
SspoQ8CG65 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC14,81□□□□□ -0,04
SspoQ8CG65 Gm26115-201ENSMUST00000175605 87 ntBASIC14,79□□□□□ -0,04
SspoQ8CG65 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC14,76□□□□□ -0,05
SspoQ8CG65 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC14,74□□□□□ -0,05
SspoQ8CG65 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC14,72□□□□□ -0,05
SspoQ8CG65 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC14,71□□□□□ -0,05
SspoQ8CG65 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC14,71□□□□□ -0,05
SspoQ8CG65 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC14,67□□□□□ -0,06
SspoQ8CG65 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC14,66□□□□□ -0,06
SspoQ8CG65 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC14,63□□□□□ -0,07
SspoQ8CG65 Gm8109-201ENSMUST00000194076 746 ntBASIC14,63□□□□□ -0,07
SspoQ8CG65 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC14,61□□□□□ -0,07
SspoQ8CG65 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC14,61□□□□□ -0,07
SspoQ8CG65 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14,6□□□□□ -0,07
SspoQ8CG65 Rab21-202ENSMUST00000218831 843 ntBASIC14,59□□□□□ -0,07
SspoQ8CG65 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC14,58□□□□□ -0,08
SspoQ8CG65 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC14,56□□□□□ -0,08
SspoQ8CG65 Gm27325-201ENSMUST00000175467 74 ntBASIC14,56□□□□□ -0,08
SspoQ8CG65 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC14,52□□□□□ -0,08
SspoQ8CG65 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC14,48□□□□□ -0,09
SspoQ8CG65 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC14,45□□□□□ -0,1
SspoQ8CG65 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC14,42□□□□□ -0,1
SspoQ8CG65 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC14,41□□□□□ -0,1
SspoQ8CG65 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC14,41□□□□□ -0,1
SspoQ8CG65 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC14,37□□□□□ -0,11
SspoQ8CG65 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC14,37□□□□□ -0,11
SspoQ8CG65 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC14,34□□□□□ -0,11
SspoQ8CG65 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC14,3□□□□□ -0,12
SspoQ8CG65 Gm24804-201ENSMUST00000174982 85 ntBASIC14,29□□□□□ -0,12
SspoQ8CG65 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC14,27□□□□□ -0,12
SspoQ8CG65 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC14,24□□□□□ -0,13
SspoQ8CG65 Gm17082-201ENSMUST00000166043 1091 ntBASIC14,24□□□□□ -0,13
SspoQ8CG65 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC14,24□□□□□ -0,13
SspoQ8CG65 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC14,19□□□□□ -0,14
SspoQ8CG65 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC14,17□□□□□ -0,14
SspoQ8CG65 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC14,16□□□□□ -0,14
SspoQ8CG65 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC14,11□□□□□ -0,15
SspoQ8CG65 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14,09□□□□□ -0,15
SspoQ8CG65 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC14,08□□□□□ -0,16
SspoQ8CG65 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14,07□□□□□ -0,16
SspoQ8CG65 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC14,06□□□□□ -0,16
SspoQ8CG65 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC14,04□□□□□ -0,16
SspoQ8CG65 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC14,03□□□□□ -0,16
SspoQ8CG65 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0,17
SspoQ8CG65 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC13,99□□□□□ -0,17
SspoQ8CG65 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC13,98□□□□□ -0,17
SspoQ8CG65 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC13,97□□□□□ -0,17
SspoQ8CG65 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC13,96□□□□□ -0,17
SspoQ8CG65 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC13,95□□□□□ -0,18
SspoQ8CG65 Zfp131-205ENSMUST00000223812 663 ntBASIC13,95□□□□□ -0,18
SspoQ8CG65 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC13,94□□□□□ -0,18
SspoQ8CG65 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC13,93□□□□□ -0,18
SspoQ8CG65 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC13,93□□□□□ -0,18
SspoQ8CG65 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC13,93□□□□□ -0,18
SspoQ8CG65 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC13,92□□□□□ -0,18
SspoQ8CG65 Gm27322-201ENSMUST00000184007 104 ntBASIC13,92□□□□□ -0,18
SspoQ8CG65 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC13,9□□□□□ -0,18
SspoQ8CG65 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC13,9□□□□□ -0,18
SspoQ8CG65 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC13,89□□□□□ -0,19
SspoQ8CG65 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC13,89□□□□□ -0,19
SspoQ8CG65 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC13,87□□□□□ -0,19
SspoQ8CG65 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC13,86□□□□□ -0,19
SspoQ8CG65 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC13,84□□□□□ -0,19
SspoQ8CG65 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC13,81□□□□□ -0,2
SspoQ8CG65 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC13,8□□□□□ -0,2
SspoQ8CG65 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC13,8□□□□□ -0,2
SspoQ8CG65 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC13,8□□□□□ -0,2
Retrieved 100 of 76,532 protein–RNA pairs in 11,5 ms